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Os01g0760000

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to Dynein light chain 1, cytoplasmic.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 8.3 (0.0571) R2 : 0.515
β1 : -2.74 (0.229) R2dD : 0.191 R2D : 0.251
β2 : 1.24 (0.147) R2dC : 0.0762 R2C : 0.0589
β3 : -1.73 (0.185) R2dE : 0.118 R2E : 0.176
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -1.04 (0.123) R2dN8 : 0.106 R2N8 : -0.00186
σ : 1.07
deviance : 523.7
__
_____
C
peak time of C : 16.7
E
wheather : precipitation
threshold : 1.868
memory length : 20082
response mode : > th
dose dependency : dose dependent
G
type of G : no
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = precipitation, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
515.77 1.07 8.53 -3.59 1.22 0.0689 0.723 -7.75 -1.06 17.1 0.9261 11583 -- --
524.7 1.07 8.3 -2.74 1.2 -1.67 -0.136 -- -1.03 16.5 2.031 20188 -- --
515.82 1.06 8.53 -3.61 1.22 0.0977 -- -8.19 -1.06 16.8 0.977 11673 -- --
523.7 1.07 8.3 -2.74 1.24 -1.73 -- -- -1.04 16.7 1.868 20082 -- --
595.25 1.14 8.52 -3.67 -- 0.11 -- -8.13 -1.09 -- 0.9681 11577 -- --
624.73 1.17 8.27 -3.63 1.21 -- 0.753 -- -0.888 17.1 -- -- -- --
625.41 1.17 8.26 -3.63 1.21 -- -- -- -0.884 16.8 -- -- -- --
601.49 1.14 8.3 -2.63 -- -1.79 -- -- -1.1 -- 1.5 27496 -- --
633.43 1.17 8.31 -- 1.32 -2.24 -- -- -1.08 16.7 2.457 47520 -- --
703.11 1.24 8.25 -3.67 -- -- -- -- -0.916 -- -- -- -- --
971.8 1.46 8.17 -- 1.28 -- -- -- -0.48 16.7 -- -- -- --
725.58 1.25 8.3 -- -- -2.24 -- -- -1.1 -- 2.44 47520 -- --
1058.56 1.52 8.16 -- -- -- -- -- -0.508 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 508.47 atmosphere 1015.0 270 < th dose dependent rect. 4 16
5 515.56 radiation 1.0 43200 < th dose dependent rect. 19 5
6 515.73 radiation 1.0 43200 < th dose dependent rect. 20 1
8 517.27 radiation 10.0 43200 < th dose dependent rect. 19 7
11 519.03 temperature 10.0 270 > th dose dependent rect. 15 18
12 519.41 precipitation 0.1 43200 > th dose independent rect. 17 1
15 519.82 wind 9.0 43200 > th dose dependent rect. 20 1
16 520.25 precipitation 0.1 43200 < th dose independent rect. 17 1
17 520.25 precipitation 0.1 43200 < th dose dependent rect. 17 1
18 520.64 precipitation 0.1 43200 > th dose dependent rect. 17 1
19 521.38 temperature 20.0 270 > th dose independent rect. 4 16
21 521.81 temperature 20.0 270 > th dose independent rect. 15 7
28 523.97 temperature 10.0 270 > th dose dependent rect. 16 16
31 524.26 temperature 10.0 270 > th dose dependent rect. 15 8
35 524.50 temperature 20.0 270 > th dose independent rect. 15 18
38 525.01 atmosphere 995.0 270 > th dose dependent rect. 10 17
40 525.20 atmosphere 1015.0 270 < th dose dependent rect. 15 6
43 525.97 radiation 1.0 14400 < th dose dependent rect. 24 4
50 526.60 temperature 30.0 270 < th dose independent rect. 21 18
52 526.75 precipitation 0.1 270 < th dose independent rect. 4 16
54 526.75 precipitation 0.1 270 < th dose dependent rect. 4 16
57 526.92 atmosphere 1015.0 10 < th dose dependent rect. 5 18
60 527.56 atmosphere 995.0 270 > th dose dependent rect. 9 19
67 527.79 humidity 90.0 14400 > th dose independent rect. 21 1
77 528.73 precipitation 0.1 14400 > th dose dependent rect. 17 7
78 528.89 temperature 30.0 270 < th dose dependent rect. 21 7
83 529.29 temperature 10.0 270 > th dose dependent rect. 2 8
84 529.32 precipitation 0.1 14400 > th dose dependent rect. 17 10
88 529.57 temperature 10.0 270 > th dose dependent rect. 2 21
95 529.98 wind 7.0 270 < th dose independent rect. 20 8
99 530.16 wind 9.0 14400 < th dose independent rect. 19 2
100 530.18 temperature 10.0 270 > th dose independent rect. 20 8
101 530.18 temperature 30.0 270 < th dose independent rect. 20 8
102 530.18 humidity 50.0 270 > th dose independent rect. 20 8
105 530.18 atmosphere 995.0 270 > th dose independent rect. 20 8
106 530.18 radiation 1.0 270 < th dose independent rect. 20 8
112 530.18 atmosphere 1015.0 270 < th dose independent rect. 4 16
113 530.18 radiation 10.0 270 < th dose dependent rect. 20 8
121 530.40 temperature 10.0 270 > th dose dependent rect. 4 16
125 530.59 atmosphere 995.0 270 > th dose dependent rect. 9 6
142 531.42 precipitation 0.1 14400 > th dose dependent rect. 20 22
148 531.75 temperature 30.0 270 < th dose dependent rect. 9 19
150 531.78 atmosphere 995.0 270 > th dose dependent rect. 22 17
154 531.94 wind 1.0 270 > th dose independent rect. 22 17
155 531.94 atmosphere 995.0 270 > th dose independent rect. 21 18
164 532.17 wind 9.0 270 < th dose independent rect. 4 16
176 532.57 precipitation 0.1 270 < th dose independent rect. 15 6
177 532.57 precipitation 0.1 270 < th dose dependent rect. 15 6
185 532.84 humidity 90.0 14400 < th dose independent rect. 21 1
194 533.16 wind 1.0 270 > th dose independent rect. 15 6
202 533.43 humidity 90.0 14400 > th dose dependent rect. 21 1
208 533.65 temperature 20.0 10 > th dose independent rect. 5 15
228 534.23 wind 7.0 14400 > th dose independent rect. 20 1
231 534.27 temperature 10.0 270 > th dose independent rect. 15 6
232 534.27 temperature 10.0 270 > th dose independent rect. 21 18
234 534.30 precipitation 0.1 270 < th dose independent rect. 20 8
235 534.30 precipitation 0.1 270 < th dose dependent rect. 20 8
250 534.42 wind 9.0 270 < th dose independent rect. 21 18
251 534.42 wind 5.0 14400 > th dose dependent rect. 20 1
264 534.59 wind 1.0 270 > th dose independent rect. 20 9
271 534.79 radiation 40.0 270 < th dose independent rect. 15 6
286 535.11 temperature 20.0 10 > th dose independent rect. 5 18
287 535.12 humidity 60.0 270 > th dose independent rect. 2 8
292 535.31 wind 9.0 14400 < th dose independent rect. 19 6
297 535.48 radiation 1.0 43200 < th dose dependent rect. 1 1
311 535.90 atmosphere 1015.0 270 < th dose independent rect. 15 6
336 536.41 wind 9.0 270 < th dose independent rect. 15 6
353 536.68 atmosphere 995.0 270 > th dose independent rect. 10 16
389 537.59 atmosphere 1015.0 270 < th dose independent rect. 20 8
392 537.73 temperature 10.0 10 > th dose dependent rect. 5 18
393 537.79 precipitation 0.1 14400 > th dose dependent sin 16 NA
394 537.79 wind 9.0 14400 > th dose dependent rect. 19 6
395 537.83 atmosphere 1015.0 270 < th dose independent rect. 21 18
404 537.92 wind 9.0 43200 > th dose dependent rect. 18 13
410 537.99 precipitation 0.1 14400 > th dose dependent rect. 11 13
419 538.13 wind 9.0 14400 > th dose dependent rect. 17 8
430 538.29 precipitation 0.1 14400 > th dose dependent rect. 11 7
434 538.32 radiation 10.0 10 < th dose dependent rect. 21 11
455 538.52 precipitation 0.1 270 < th dose independent rect. 2 8
456 538.52 precipitation 0.1 270 < th dose dependent rect. 2 8
465 538.64 radiation 1.0 43200 < th dose dependent rect. 23 1
478 538.75 wind 9.0 270 < th dose independent rect. 10 16
496 538.94 wind 9.0 14400 > th dose dependent rect. 17 18
505 539.07 precipitation 0.1 270 < th dose independent rect. 21 18
507 539.07 precipitation 0.1 270 < th dose dependent rect. 21 18
522 539.21 atmosphere 995.0 43200 < th dose independent rect. 15 1
530 539.33 wind 9.0 14400 > th dose independent rect. 19 6
532 539.35 atmosphere 1015.0 270 < th dose independent rect. 14 8
539 539.44 atmosphere 995.0 43200 < th dose dependent rect. 15 1
563 539.71 temperature 15.0 270 > th dose independent rect. 2 8
564 539.71 wind 9.0 43200 > th dose dependent sin 13 NA
572 539.83 temperature 20.0 30 > th dose independent rect. 17 17
589 539.95 atmosphere 1015.0 90 < th dose dependent rect. 17 6
642 540.60 radiation 40.0 270 < th dose independent rect. 2 8
645 540.66 atmosphere 995.0 43200 > th dose independent rect. 15 1
656 540.76 precipitation 0.1 4320 > th dose dependent rect. 2 16
659 540.77 temperature 25.0 270 < th dose independent rect. 9 18
683 540.95 wind 9.0 270 < th dose independent rect. 2 8
695 541.08 atmosphere 995.0 270 > th dose independent rect. 2 8
696 541.08 atmosphere 1015.0 270 < th dose independent rect. 2 8
697 541.08 temperature 10.0 270 > th dose independent rect. 10 16
706 541.16 temperature 30.0 270 < th dose independent rect. 9 6
707 541.16 temperature 30.0 10 < th dose dependent rect. 20 9
716 541.22 precipitation 0.1 4320 > th dose dependent rect. 23 19
719 541.24 temperature 30.0 10 < th dose dependent rect. 20 21
722 541.27 precipitation 0.1 14400 > th dose dependent rect. 17 19
766 541.54 precipitation 0.1 14400 < th dose independent rect. 17 6
769 541.54 precipitation 0.1 14400 < th dose dependent rect. 17 6
781 541.66 radiation 10.0 90 < th dose dependent rect. 20 11
827 541.88 temperature 30.0 10 < th dose dependent rect. 23 18
829 541.90 radiation 1.0 270 < th dose dependent sin 12 NA
831 541.91 precipitation 0.1 4320 > th dose independent rect. 13 5
839 542.02 precipitation 0.1 14400 > th dose independent rect. 17 6
860 542.30 precipitation 0.1 4320 > th dose independent rect. 15 3
916 542.85 atmosphere 1000.0 14400 < th dose independent rect. 12 1
919 542.86 wind 9.0 14400 > th dose dependent rect. 20 15
922 542.88 atmosphere 995.0 270 > th dose independent rect. 8 8
938 543.02 wind 1.0 90 > th dose independent rect. 1 16
942 543.06 atmosphere 995.0 30 > th dose dependent rect. 1 16
943 543.08 atmosphere 1000.0 14400 > th dose independent rect. 12 1
973 543.34 precipitation 0.1 270 < th dose independent rect. 10 16
974 543.34 precipitation 0.1 270 < th dose dependent rect. 10 16
978 543.36 precipitation 0.1 4320 < th dose independent rect. 13 5
979 543.36 precipitation 0.1 4320 < th dose dependent rect. 13 5
983 543.40 precipitation 0.1 270 < th dose independent rect. 15 18
984 543.40 precipitation 0.1 270 < th dose dependent rect. 15 18