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Os01g0759400

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : OsPK7.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 8.37 (0.0254) R2 : 0.934
β1 : 1.3 (0.0933) R2dD : 0.0298 R2D : 0.0365
β2 : 3.3 (0.0721) R2dC : 0.428 R2C : 0.716
β3 : 2.99 (0.102) R2dE : 0.177 R2E : 0.476
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.181 (0.0545) R2dN8 : 0.00213 R2N8 : 0.00241
σ : 0.474
deviance : 103.43
__
_____
C
peak time of C : 13.5
E
wheather : temperature
threshold : 5.9
memory length : 244
response mode : > th
dose dependency : dose dependent
G
type of G : rect.
peak or start time of G : 4.97
open length of G : 19.6

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose dependent, type of G = rect.)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
98.73 0.467 8.35 1.3 3.24 3.11 -1.17 -0.042 -0.169 13.3 7.858 257 5.05 19.3
98.13 0.461 8.35 1.33 3.25 3.15 -1.06 -- -0.149 13.3 6.489 253 4.96 19.5
102.2 0.471 8.38 1.26 3.28 2.98 -- -0.739 -0.178 13.5 6.28 239 5.03 19.6
103.43 0.474 8.37 1.3 3.3 2.99 -- -- -0.181 13.5 5.9 244 4.97 19.6
268.64 0.763 8.53 1.94 -- 4.55 -- 0.363 -0.262 -- 7.389 30 6.79 15
184.81 0.637 8.34 1.65 4.76 -- -0.464 -- 0.056 14.6 -- -- -- --
185.56 0.638 8.34 1.64 4.76 -- -- -- 0.0533 14.7 -- -- -- --
212.84 0.679 8.38 1.24 -- 4.71 -- -- -0.26 -- -4.502 243 5.67 14.7
147.19 0.565 8.38 -- 3.29 3.17 -- -- -0.298 13.3 6.455 245 4.93 19.9
1508.54 1.81 8.36 1.44 -- -- -- -- -0.0669 -- -- -- -- --
256.33 0.749 8.38 -- 4.73 -- -- -- -0.129 14.6 -- -- -- --
217.53 0.687 8.39 -- -- 4.79 -- -- -0.255 -- -17.36 378 4.73 13.5
1562.92 1.85 8.4 -- -- -- -- -- -0.226 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 101.28 temperature 10.0 270 > th dose dependent rect. 5 19
12 113.48 temperature 10.0 10 > th dose dependent rect. 7 19
18 116.33 temperature 10.0 10 > th dose dependent rect. 6 21
41 119.79 radiation 30.0 270 < th dose dependent rect. 13 16
45 119.95 radiation 20.0 270 < th dose dependent rect. 15 14
50 120.44 radiation 1.0 270 < th dose dependent rect. 22 23
58 121.80 temperature 30.0 270 < th dose independent rect. 13 16
60 121.93 temperature 30.0 270 < th dose independent rect. 15 14
61 121.93 temperature 30.0 270 < th dose independent rect. 11 18
68 122.41 radiation 1.0 270 < th dose independent rect. 22 23
79 123.41 humidity 70.0 270 > th dose independent rect. 13 16
83 123.62 humidity 50.0 270 > th dose independent rect. 9 10
107 126.27 radiation 1.0 270 > th dose independent rect. 16 23
109 126.51 humidity 70.0 10 > th dose independent rect. 12 19
111 126.64 temperature 10.0 270 > th dose dependent rect. 15 9
114 126.76 humidity 50.0 270 > th dose independent rect. 10 19
116 126.78 humidity 50.0 270 > th dose independent rect. 9 21
131 127.67 radiation 20.0 270 < th dose independent rect. 13 16
132 127.82 radiation 10.0 270 < th dose dependent rect. 9 20
135 127.91 humidity 50.0 270 > th dose dependent rect. 11 18
141 128.16 humidity 50.0 10 > th dose dependent rect. 12 19
147 128.46 radiation 1.0 270 < th dose independent rect. 9 20
154 128.82 radiation 1.0 270 < th dose independent rect. 15 14
157 129.07 radiation 20.0 270 < th dose independent rect. 15 14
158 129.07 humidity 50.0 90 > th dose dependent rect. 13 17
163 129.39 temperature 30.0 10 < th dose dependent rect. 12 19
214 131.41 temperature 30.0 270 < th dose dependent rect. 11 8
227 132.08 radiation 1.0 270 > th dose independent sin 9 NA
235 132.34 temperature 30.0 270 < th dose independent rect. 10 9
240 132.48 humidity 50.0 270 > th dose independent rect. 8 23
255 132.96 temperature 20.0 10 > th dose independent rect. 7 19
283 133.54 temperature 20.0 270 > th dose independent rect. 5 19
317 134.24 temperature 10.0 270 > th dose dependent rect. 6 3
322 134.35 wind 5.0 270 < th dose independent rect. 6 3
328 134.41 temperature 10.0 720 > th dose dependent rect. 13 4
341 134.69 temperature 10.0 270 > th dose dependent rect. 5 5
342 134.71 radiation 10.0 270 < th dose dependent sin 11 NA
345 134.77 wind 9.0 270 < th dose dependent rect. 6 3
351 134.88 radiation 1.0 270 > th dose independent rect. 18 15
356 134.99 temperature 15.0 270 > th dose independent rect. 5 5
361 135.06 wind 7.0 270 < th dose independent rect. 5 5
371 135.29 radiation 1.0 270 < th dose independent sin 10 NA
379 135.50 precipitation 0.1 270 < th dose independent rect. 14 11
380 135.50 precipitation 0.1 270 < th dose dependent rect. 14 11
386 135.66 wind 9.0 270 < th dose dependent rect. 5 5
399 135.88 humidity 50.0 270 > th dose dependent rect. 10 9
414 136.08 radiation 1.0 270 > th dose independent rect. 6 3
424 136.23 radiation 40.0 270 < th dose independent rect. 11 18
427 136.29 temperature 30.0 270 < th dose independent rect. 6 3
428 136.32 precipitation 0.1 270 < th dose independent rect. 5 5
429 136.32 precipitation 0.1 270 < th dose dependent rect. 5 5
431 136.35 radiation 1.0 270 > th dose independent rect. 4 5
441 136.35 wind 7.0 270 < th dose independent rect. 4 21
451 136.46 wind 5.0 270 < th dose independent rect. 7 1
453 136.48 humidity 60.0 270 > th dose independent rect. 6 3
454 136.48 humidity 50.0 270 > th dose independent rect. 5 5
456 136.51 atmosphere 995.0 270 > th dose independent rect. 5 5
457 136.51 atmosphere 1015.0 270 < th dose independent rect. 5 5
458 136.51 temperature 10.0 270 > th dose independent rect. 10 19
463 136.56 precipitation 0.1 270 < th dose independent rect. 6 3
464 136.56 wind 7.0 270 < th dose independent rect. 14 10
465 136.56 precipitation 0.1 270 < th dose dependent rect. 6 3
470 136.60 temperature 10.0 270 > th dose independent rect. 6 3
473 136.60 atmosphere 995.0 270 > th dose independent rect. 6 3
474 136.60 atmosphere 1015.0 270 < th dose independent rect. 6 3
476 136.60 temperature 10.0 270 > th dose independent rect. 9 21
495 136.78 temperature 30.0 270 < th dose independent rect. 5 5
496 136.78 atmosphere 995.0 270 > th dose independent rect. 10 19
502 136.84 wind 9.0 270 < th dose independent rect. 20 13
506 136.86 temperature 10.0 270 > th dose independent rect. 9 11
507 136.86 atmosphere 1015.0 270 < th dose independent rect. 9 11
508 136.86 temperature 10.0 270 > th dose independent rect. 20 13
509 136.86 humidity 50.0 270 > th dose independent rect. 20 13
510 136.86 atmosphere 995.0 270 > th dose independent rect. 20 13
514 136.91 temperature 30.0 270 < th dose independent rect. 20 13
519 136.94 temperature 10.0 720 > th dose dependent rect. 5 12
525 137.03 precipitation 0.1 270 < th dose independent rect. 4 21
526 137.03 precipitation 0.1 270 < th dose dependent rect. 4 21
528 137.08 wind 9.0 270 < th dose dependent rect. 7 1
545 137.27 temperature 10.0 270 > th dose dependent rect. 7 1
547 137.29 precipitation 0.1 270 < th dose independent rect. 20 13
548 137.29 precipitation 0.1 270 < th dose dependent rect. 20 13
561 137.33 radiation 1.0 90 > th dose independent sin 2 NA
572 137.44 wind 7.0 270 < th dose independent rect. 5 19
584 137.58 atmosphere 995.0 270 > th dose independent rect. 9 21
609 137.87 radiation 1.0 270 < th dose independent rect. 15 23
621 138.03 radiation 40.0 270 < th dose independent rect. 6 3
639 138.09 radiation 1.0 270 < th dose independent rect. 13 22
683 138.56 precipitation 0.1 270 < th dose independent rect. 7 1
685 138.56 precipitation 0.1 270 < th dose dependent rect. 7 1
697 138.66 temperature 10.0 270 > th dose independent rect. 7 1
699 138.66 temperature 30.0 270 < th dose independent rect. 7 1
700 138.66 humidity 50.0 270 > th dose independent rect. 7 1
702 138.66 atmosphere 995.0 270 > th dose independent rect. 7 1
703 138.66 atmosphere 1015.0 270 < th dose independent rect. 7 1
704 138.66 temperature 10.0 270 > th dose independent rect. 8 23
736 138.94 radiation 1.0 270 > th dose independent no NA NA
737 138.94 radiation 1.0 270 > th dose independent rect. 4 15
783 138.95 wind 9.0 270 < th dose independent rect. 3 23
786 138.97 radiation 1.0 270 < th dose independent no NA NA
807 139.06 radiation 40.0 270 < th dose independent rect. 7 1
823 139.17 radiation 1.0 270 < th dose dependent rect. 15 23
827 139.23 precipitation 0.1 270 < th dose independent rect. 5 19
829 139.23 precipitation 0.1 270 < th dose dependent rect. 5 19
837 139.30 radiation 1.0 270 > th dose independent rect. 7 1
841 139.35 atmosphere 995.0 270 > th dose independent rect. 9 11
843 139.35 radiation 1.0 270 < th dose dependent rect. 13 22
872 139.57 wind 1.0 270 > th dose independent rect. 10 19
883 139.63 wind 1.0 270 > th dose independent rect. 1 3
885 139.63 temperature 10.0 270 > th dose independent rect. 14 11
886 139.63 temperature 10.0 270 > th dose independent rect. 1 13
887 139.63 atmosphere 995.0 270 > th dose independent rect. 1 13
888 139.63 atmosphere 1015.0 270 < th dose independent rect. 1 13
890 139.63 precipitation 0.1 270 < th dose independent rect. 10 19
891 139.63 precipitation 0.1 270 < th dose dependent rect. 10 19
895 139.64 atmosphere 995.0 10 > th dose dependent rect. 12 19
907 139.74 precipitation 0.1 270 < th dose independent rect. 1 3
908 139.74 precipitation 0.1 270 < th dose dependent rect. 1 3
909 139.75 wind 9.0 270 < th dose independent rect. 10 19
920 139.87 wind 7.0 270 < th dose independent rect. 1 3
924 139.91 temperature 30.0 10 < th dose dependent rect. 12 8
943 139.94 temperature 30.0 10 < th dose dependent rect. 2 18
953 140.01 temperature 10.0 270 > th dose independent rect. 1 3
955 140.01 temperature 30.0 270 < th dose independent rect. 1 3
956 140.01 humidity 50.0 270 > th dose independent rect. 1 3
959 140.01 atmosphere 995.0 270 > th dose independent rect. 1 3
960 140.01 atmosphere 1010.0 270 < th dose independent rect. 1 3
962 140.01 radiation 1.0 270 < th dose independent rect. 1 3
967 140.01 temperature 10.0 270 > th dose independent rect. 4 21
968 140.01 radiation 1.0 270 < th dose dependent rect. 1 3
997 140.21 radiation 1.0 270 < th dose dependent no NA NA