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Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os01g0758800

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 2.89 (0.0395) R2 : 0.00132
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.0645 (0.0831) R2dN8 : 0.0017 R2N8 : 0.00132
σ : 0.744
deviance : 253.84
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = < th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
244.18 0.734 2.9 0.0548 0.242 0.277 -0.0172 0.985 -0.0377 14.9 20.46 38 -- --
248.47 0.74 2.88 0.239 0.216 0.212 -0.531 -- 0.00162 14.4 20.46 38 -- --
244.17 0.728 2.9 0.0533 0.242 0.277 -- 0.992 -0.0381 14.9 20.44 40 -- --
249.3 0.735 2.88 0.231 0.236 0.203 -- -- 0.0104 14.8 21.6 54 -- --
247.32 0.732 2.9 0.0393 -- 0.22 -- 0.948 -0.0528 -- 20.5 40 -- --
250.4 0.742 2.89 0.183 0.171 -- -0.544 -- -0.0392 14.5 -- -- -- --
251.35 0.742 2.89 0.169 0.179 -- -- -- -0.0419 15.4 -- -- -- --
252.08 0.743 2.88 0.2 -- 0.152 -- -- -0.0179 -- 20.4 49 -- --
250.6 0.737 2.88 -- 0.221 0.169 -- -- -0.022 14.9 21.62 60 -- --
253.15 0.743 2.89 0.161 -- -- -- -- -0.0466 -- -- -- -- --
252.1 0.743 2.89 -- 0.176 -- -- -- -0.0607 15.4 -- -- -- --
253.1 0.743 2.89 -- -- 0.124 -- -- -0.0447 -- 20.4 49 -- --
253.84 0.744 2.89 -- -- -- -- -- -0.0645 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 229.99 wind 3.0 90 > th dose dependent rect. 2 1
2 230.08 radiation 1.0 90 < th dose independent rect. 8 1
5 230.08 radiation 1.0 90 < th dose dependent rect. 8 1
10 231.38 wind 5.0 90 > th dose independent rect. 2 1
15 232.18 atmosphere 1005.0 10 < th dose independent rect. 3 1
34 235.62 wind 5.0 270 > th dose dependent rect. 1 6
41 236.01 temperature 20.0 10 < th dose independent rect. 3 1
60 237.17 temperature 30.0 30 < th dose dependent rect. 2 2
61 237.18 wind 1.0 90 < th dose dependent rect. 20 1
66 237.39 wind 7.0 90 > th dose independent rect. 12 1
70 237.57 wind 5.0 90 > th dose dependent rect. 12 2
79 237.75 temperature 25.0 90 < th dose dependent rect. 12 1
102 238.65 temperature 25.0 10 < th dose independent rect. 13 1
109 238.68 atmosphere 1000.0 30 > th dose independent rect. 2 2
113 238.78 wind 1.0 90 < th dose independent rect. 20 1
124 238.89 precipitation 0.1 30 < th dose independent rect. 2 2
125 238.89 precipitation 0.1 30 < th dose dependent rect. 2 2
126 238.90 wind 3.0 30 < th dose independent rect. 2 2
137 239.09 temperature 25.0 10 < th dose dependent rect. 3 20
144 239.17 atmosphere 1005.0 270 < th dose independent rect. 24 4
146 239.21 wind 3.0 30 < th dose dependent rect. 3 1
153 239.33 wind 3.0 10 < th dose independent rect. 22 1
163 239.47 wind 1.0 90 < th dose dependent rect. 16 5
166 239.52 wind 7.0 10 > th dose independent rect. 13 1
171 239.63 temperature 10.0 30 > th dose dependent rect. 4 22
174 239.65 wind 5.0 10 > th dose dependent rect. 13 1
176 239.67 atmosphere 1015.0 30 < th dose dependent rect. 2 2
192 239.96 wind 5.0 10 < th dose dependent rect. 22 1
195 239.99 wind 9.0 30 < th dose independent rect. 4 22
202 240.07 humidity 50.0 30 > th dose dependent rect. 2 2
207 240.08 temperature 10.0 30 > th dose independent rect. 2 2
210 240.08 humidity 50.0 30 > th dose independent rect. 2 2
216 240.08 radiation 1.0 30 < th dose independent rect. 2 2
221 240.08 temperature 10.0 30 > th dose independent rect. 4 22
222 240.08 radiation 1.0 30 < th dose dependent rect. 2 2
234 240.17 radiation 30.0 720 < th dose independent rect. 16 7
238 240.22 wind 9.0 720 < th dose independent rect. 16 7
258 240.30 temperature 10.0 720 > th dose independent rect. 16 7
260 240.30 temperature 10.0 720 > th dose independent rect. 23 17
269 240.32 wind 1.0 10 > th dose independent rect. 3 2
275 240.40 wind 9.0 720 < th dose independent rect. 23 17
276 240.41 humidity 90.0 30 > th dose independent rect. 2 2
284 240.51 wind 1.0 90 < th dose independent rect. 16 5
285 240.51 temperature 20.0 30 < th dose independent rect. 3 20
289 240.55 precipitation 0.1 30 < th dose independent rect. 4 22
290 240.55 precipitation 0.1 4320 > th dose dependent rect. 16 2
291 240.55 precipitation 0.1 30 < th dose dependent rect. 4 22
296 240.59 temperature 10.0 720 > th dose independent rect. 4 7
297 240.59 atmosphere 995.0 720 > th dose independent rect. 4 7
298 240.59 atmosphere 1015.0 720 < th dose independent rect. 4 7
299 240.59 temperature 10.0 720 > th dose independent rect. 11 17
307 240.63 wind 9.0 720 < th dose independent rect. 4 7
324 240.82 temperature 30.0 720 < th dose dependent rect. 2 2
327 240.87 wind 9.0 720 < th dose independent rect. 11 17
336 240.94 temperature 30.0 30 < th dose dependent rect. 22 1
338 240.96 precipitation 0.1 10 < th dose independent rect. 22 1
339 240.96 precipitation 0.1 10 < th dose dependent rect. 22 1
354 241.13 humidity 80.0 10 > th dose independent rect. 22 1
357 241.14 atmosphere 1000.0 10 > th dose independent rect. 22 1
470 241.47 humidity 90.0 10 < th dose independent rect. 22 1
472 241.48 atmosphere 995.0 10 > th dose dependent rect. 22 1
507 241.55 wind 1.0 10 > th dose independent rect. 22 1
515 241.63 temperature 20.0 30 < th dose independent rect. 24 5
520 241.66 wind 7.0 720 < th dose independent rect. 19 7
524 241.68 wind 7.0 10 < th dose independent rect. 22 1
526 241.68 temperature 10.0 10 > th dose independent rect. 22 1
528 241.68 temperature 30.0 10 < th dose independent rect. 22 1
529 241.68 humidity 50.0 10 > th dose independent rect. 22 1
533 241.68 atmosphere 1010.0 10 < th dose independent rect. 22 1
535 241.68 radiation 1.0 10 < th dose independent rect. 22 1
540 241.68 temperature 10.0 10 > th dose independent rect. 23 23
541 241.68 radiation 1.0 10 < th dose dependent rect. 22 1
547 241.72 temperature 30.0 10 < th dose dependent rect. 13 1
548 241.72 humidity 50.0 10 > th dose dependent rect. 22 1
549 241.73 wind 9.0 30 < th dose independent rect. 23 23
558 241.80 wind 7.0 720 < th dose independent rect. 23 8
560 241.82 radiation 1.0 30 < th dose dependent rect. 2 17
565 241.84 radiation 1.0 30 < th dose dependent rect. 2 21
572 241.87 temperature 25.0 10 < th dose dependent rect. 3 12
613 242.01 radiation 40.0 1440 < th dose dependent rect. 4 1
618 242.02 temperature 25.0 10 < th dose dependent rect. 3 16
638 242.03 atmosphere 1015.0 30 < th dose dependent rect. 22 1
679 242.12 precipitation 0.1 270 > th dose independent rect. 24 1
683 242.12 precipitation 0.1 270 > th dose dependent rect. 24 1
690 242.14 radiation 40.0 90 < th dose independent rect. 4 22
705 242.16 temperature 25.0 10 < th dose dependent rect. 24 23
709 242.18 atmosphere 995.0 30 > th dose independent rect. 4 22
743 242.31 precipitation 0.1 720 < th dose independent rect. 4 7
744 242.31 temperature 10.0 10 > th dose dependent rect. 22 1
746 242.31 precipitation 0.1 720 < th dose dependent rect. 4 7
748 242.34 wind 9.0 1440 < th dose independent rect. 4 1
749 242.34 temperature 10.0 1440 > th dose independent rect. 4 1
752 242.34 temperature 30.0 1440 < th dose independent rect. 4 1
756 242.34 humidity 50.0 1440 > th dose independent rect. 4 1
765 242.34 atmosphere 995.0 1440 > th dose independent rect. 4 1
766 242.34 atmosphere 1015.0 1440 < th dose independent rect. 4 1
767 242.34 radiation 20.0 1440 < th dose independent rect. 4 1
779 242.34 temperature 10.0 1440 > th dose independent rect. 5 23
785 242.35 wind 3.0 270 < th dose dependent rect. 8 1
793 242.42 humidity 50.0 30 < th dose independent rect. 15 1
794 242.42 humidity 50.0 30 < th dose independent rect. 13 3
802 242.45 humidity 50.0 30 < th dose dependent rect. 15 1
803 242.45 humidity 50.0 30 < th dose dependent rect. 13 3
806 242.47 precipitation 0.1 4320 < th dose independent rect. 16 2
808 242.47 precipitation 0.1 4320 < th dose dependent rect. 16 2
820 242.58 wind 3.0 270 > th dose independent rect. 24 19
825 242.61 precipitation 0.1 4320 > th dose independent rect. 16 2
838 242.70 temperature 20.0 30 < th dose independent rect. 24 23
839 242.70 radiation 20.0 4320 < th dose dependent rect. 23 1
863 242.72 precipitation 0.1 4320 < th dose independent rect. 20 2
885 242.72 precipitation 0.1 4320 < th dose dependent rect. 20 2
926 242.75 precipitation 0.1 4320 > th dose independent rect. 20 3
927 242.76 radiation 1.0 30 < th dose independent rect. 2 21
931 242.76 atmosphere 995.0 30 > th dose dependent rect. 2 2
937 242.77 temperature 10.0 30 > th dose dependent rect. 2 2
942 242.79 wind 1.0 10 > th dose dependent rect. 3 2
944 242.80 temperature 20.0 30 < th dose independent rect. 3 15
963 242.85 atmosphere 1005.0 10 > th dose dependent rect. 13 1
995 242.91 temperature 20.0 10 < th dose independent rect. 3 13