Os01g0758500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os01g0758500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 141.53 | 0.559 | 4.17 | -2.37 | 0.971 | 0.243 | -3.03 | 4.02 | -0.147 | 7.63 | 91.02 | 806 | -- | -- |
| 166.67 | 0.606 | 4.22 | -1.97 | 1.15 | -0.191 | -1.29 | -- | -0.181 | 7.4 | 88.69 | 701 | -- | -- |
| 145.43 | 0.562 | 4.18 | -2.44 | 1.09 | -0.0384 | -- | 4.55 | -0.178 | 7.98 | 86.8 | 1370 | -- | -- |
| 168.4 | 0.604 | 4.16 | -2.14 | 1.07 | 0.433 | -- | -- | -0.00937 | 7.9 | 93 | 2736 | -- | -- |
| 210.19 | 0.675 | 4.2 | -2.44 | -- | -0.123 | -- | 4.71 | -0.175 | -- | 86 | 1371 | -- | -- |
| 169.15 | 0.61 | 4.21 | -1.99 | 1.11 | -- | -1.13 | -- | -0.136 | 7.83 | -- | -- | -- | -- |
| 172.67 | 0.615 | 4.2 | -2.02 | 1.1 | -- | -- | -- | -0.133 | 8.01 | -- | -- | -- | -- |
| 196.22 | 0.652 | 4.23 | -1.92 | -- | 1.02 | -- | -- | -0.114 | -- | 78 | 694 | -- | -- |
| 259.06 | 0.75 | 4.2 | -- | 1.07 | 0.726 | -- | -- | -0.00586 | 8.48 | 96 | 9375 | -- | -- |
| 239.31 | 0.723 | 4.23 | -2.01 | -- | -- | -- | -- | -0.119 | -- | -- | -- | -- | -- |
| 280.29 | 0.783 | 4.15 | -- | 1.09 | -- | -- | -- | 0.0917 | 8.15 | -- | -- | -- | -- |
| 268.91 | 0.764 | 4.11 | -- | -- | 1.75 | -- | -- | 0.361 | -- | 96 | 27959 | -- | -- |
| 345.89 | 0.868 | 4.18 | -- | -- | -- | -- | -- | 0.104 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 141.46 | humidity | 90 | 1440 | < th | dose independent | rect. | 24 | 21 |
| 11 | 142.92 | humidity | 90 | 720 | > th | dose independent | rect. | 18 | 20 |
| 15 | 143.01 | humidity | 70 | 1440 | > th | dose dependent | rect. | 22 | 19 |
| 17 | 143.09 | humidity | 90 | 720 | > th | dose independent | rect. | 18 | 23 |
| 21 | 143.12 | humidity | 90 | 720 | > th | dose independent | rect. | 16 | 21 |
| 23 | 143.13 | humidity | 80 | 1440 | > th | dose dependent | rect. | 23 | 21 |
| 25 | 143.14 | humidity | 70 | 1440 | > th | dose dependent | rect. | 19 | 22 |
| 30 | 143.15 | humidity | 70 | 1440 | > th | dose dependent | rect. | 14 | 22 |
| 31 | 143.16 | humidity | 90 | 720 | < th | dose independent | sin | 11 | NA |
| 35 | 143.20 | humidity | 90 | 720 | < th | dose independent | rect. | 18 | 15 |
| 55 | 143.33 | humidity | 90 | 720 | > th | dose dependent | rect. | 3 | 21 |
| 65 | 143.38 | humidity | 90 | 1440 | < th | dose independent | rect. | 18 | 23 |
| 78 | 143.46 | humidity | 90 | 720 | > th | dose independent | rect. | 22 | 23 |
| 83 | 143.52 | humidity | 90 | 720 | > th | dose independent | rect. | 10 | 23 |
| 87 | 143.54 | humidity | 90 | 1440 | < th | dose independent | rect. | 8 | 23 |
| 90 | 143.57 | humidity | 90 | 1440 | < th | dose independent | rect. | 13 | 23 |
| 91 | 143.57 | humidity | 90 | 1440 | < th | dose independent | rect. | 16 | 23 |
| 100 | 143.61 | humidity | 90 | 720 | > th | dose independent | rect. | 1 | 23 |
| 105 | 143.65 | humidity | 90 | 720 | > th | dose independent | sin | 10 | NA |
| 106 | 143.65 | humidity | 90 | 720 | > th | dose independent | no | NA | NA |
| 114 | 143.67 | humidity | 70 | 1440 | > th | dose dependent | rect. | 8 | 23 |
| 118 | 143.69 | humidity | 90 | 1440 | > th | dose independent | rect. | 24 | 21 |
| 135 | 143.74 | humidity | 90 | 1440 | < th | dose independent | no | NA | NA |
| 159 | 143.81 | humidity | 90 | 1440 | < th | dose independent | rect. | 10 | 23 |
| 162 | 143.82 | humidity | 90 | 1440 | < th | dose independent | rect. | 5 | 23 |
| 176 | 143.86 | humidity | 70 | 1440 | > th | dose dependent | no | NA | NA |
| 213 | 143.98 | humidity | 70 | 1440 | > th | dose dependent | rect. | 5 | 23 |
| 258 | 144.12 | humidity | 90 | 720 | > th | dose dependent | rect. | 5 | 18 |
| 350 | 144.36 | humidity | 90 | 1440 | > th | dose independent | rect. | 5 | 23 |
| 501 | 144.74 | wind | 9 | 14400 | < th | dose dependent | rect. | 2 | 1 |
| 616 | 145.02 | humidity | 80 | 720 | > th | dose dependent | sin | 10 | NA |
| 623 | 145.06 | wind | 1 | 14400 | > th | dose dependent | rect. | 2 | 1 |
| 867 | 145.67 | humidity | 90 | 1440 | < th | dose dependent | rect. | 16 | 20 |
| 907 | 145.76 | humidity | 90 | 1440 | < th | dose dependent | sin | 10 | NA |