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Os01g0757700

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 12.7 (0.0182) R2 : 0.855
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : 2.92 (0.0575) R2dE : 0.824 R2E : 0.819
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.363 (0.0382) R2dN8 : 0.0357 R2N8 : 0.0307
σ : 0.341
deviance : 53.72
__
_____
C
peak time of C : --
E
wheather : temperature
threshold : -1.041
memory length : 354
response mode : > th
dose dependency : dose dependent
G
type of G : rect.
peak or start time of G : 7.02
open length of G : 17.6

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose dependent, type of G = rect.)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
41.47 0.303 12.7 -0.305 1.15 1.97 -0.923 0.109 -0.392 17.9 5.226 241 7.27 19.6
40.85 0.298 12.8 -0.315 1.12 2.07 -0.973 -- -0.4 17.8 4.202 247 7.05 19.8
41.8 0.301 12.8 -0.274 1.04 2.12 -- -0.559 -0.371 18 2.673 256 7.02 19.7
41.36 0.3 12.7 -0.253 1.28 1.96 -- -- -0.362 18.1 2.527 214 7 20.4
60.07 0.361 12.7 -0.288 -- 3.17 -- -0.201 -0.38 -- 2.058 291 6.97 19.2
80.32 0.42 12.8 -0.0624 2.31 -- -0.613 -- -0.334 17.9 -- -- -- --
81.23 0.422 12.8 -0.0579 2.31 -- -- -- -0.337 18 -- -- -- --
53.09 0.339 12.7 -0.29 -- 3.17 -- -- -0.37 -- 2.384 342 7.03 18.2
43.11 0.306 12.7 -- 1.3 1.96 -- -- -0.305 18.1 0.8769 211 7.03 20.5
357.47 0.883 12.7 -0.126 -- -- -- -- -0.389 -- -- -- -- --
81.32 0.422 12.8 -- 2.31 -- -- -- -0.33 18 -- -- -- --
53.72 0.341 12.7 -- -- 2.92 -- -- -0.363 -- -1.041 354 7.02 17.6
357.89 0.883 12.7 -- -- -- -- -- -0.375 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 45.60 temperature 10.0 270 > th dose dependent rect. 7 19
3 46.17 temperature 10.0 30 > th dose dependent rect. 9 20
23 50.26 radiation 30.0 270 < th dose dependent rect. 15 16
32 51.12 radiation 20.0 270 < th dose independent rect. 15 16
40 51.88 temperature 10.0 270 > th dose dependent rect. 20 7
42 52.06 temperature 10.0 270 > th dose dependent rect. 21 5
52 52.51 wind 7.0 270 < th dose independent rect. 7 20
55 52.58 wind 9.0 270 < th dose independent rect. 7 10
56 52.60 radiation 30.0 270 < th dose dependent rect. 3 6
58 52.67 radiation 10.0 270 < th dose independent rect. 3 4
63 52.97 precipitation 0.1 270 < th dose independent rect. 7 20
64 52.97 precipitation 0.1 270 < th dose dependent rect. 7 20
65 53.04 temperature 10.0 270 > th dose dependent rect. 3 4
66 53.08 radiation 1.0 270 > th dose independent rect. 7 10
67 53.09 radiation 1.0 90 > th dose independent rect. 4 3
80 53.23 precipitation 0.1 270 < th dose independent rect. 7 10
81 53.23 precipitation 0.1 270 < th dose dependent rect. 7 10
85 53.32 radiation 20.0 270 < th dose independent rect. 2 7
88 53.39 wind 5.0 270 < th dose independent rect. 3 4
90 53.44 humidity 50.0 270 > th dose independent rect. 17 14
96 53.61 temperature 10.0 270 > th dose dependent rect. 4 2
100 53.67 temperature 10.0 270 > th dose independent rect. 7 10
101 53.67 atmosphere 1015.0 270 < th dose independent rect. 7 10
102 53.67 temperature 10.0 270 > th dose independent rect. 17 14
103 53.67 atmosphere 995.0 270 > th dose independent rect. 17 14
106 53.71 radiation 20.0 90 < th dose independent rect. 5 4
108 53.73 humidity 70.0 270 > th dose independent rect. 3 4
116 53.88 precipitation 0.1 270 < th dose independent rect. 3 4
117 53.88 precipitation 0.1 270 < th dose dependent rect. 3 4
119 53.89 temperature 10.0 270 > th dose independent rect. 3 4
121 53.89 temperature 30.0 270 < th dose independent rect. 3 4
122 53.89 humidity 50.0 270 > th dose independent rect. 3 4
124 53.89 atmosphere 995.0 270 > th dose independent rect. 3 4
125 53.89 atmosphere 1015.0 270 < th dose independent rect. 3 4
128 53.89 temperature 10.0 270 > th dose independent rect. 7 20
130 53.89 atmosphere 995.0 270 > th dose dependent rect. 3 4
134 53.93 radiation 40.0 270 < th dose dependent rect. 3 4
141 54.04 temperature 10.0 30 > th dose dependent rect. 5 4
151 54.27 wind 9.0 270 < th dose independent rect. 17 14
164 54.37 radiation 40.0 90 < th dose independent rect. 5 17
169 54.46 wind 9.0 270 < th dose independent rect. 6 22
179 54.57 wind 5.0 90 < th dose independent rect. 5 2
184 54.58 atmosphere 1000.0 270 > th dose dependent rect. 4 2
188 54.68 radiation 40.0 90 < th dose dependent rect. 5 4
191 54.72 humidity 70.0 90 > th dose independent rect. 5 4
192 54.72 precipitation 0.1 270 < th dose independent rect. 21 6
194 54.72 precipitation 0.1 270 < th dose dependent rect. 21 6
196 54.78 humidity 70.0 90 > th dose independent rect. 5 2
197 54.80 precipitation 0.1 90 < th dose independent rect. 7 22
198 54.80 precipitation 0.1 90 < th dose dependent rect. 7 22
199 54.81 wind 7.0 270 < th dose independent rect. 21 6
204 54.83 precipitation 0.1 90 < th dose independent rect. 5 2
206 54.83 precipitation 0.1 90 < th dose dependent rect. 5 2
210 54.85 temperature 10.0 270 > th dose independent rect. 21 6
211 54.85 temperature 30.0 270 < th dose independent rect. 21 6
212 54.85 humidity 50.0 270 > th dose independent rect. 21 6
215 54.85 atmosphere 995.0 270 > th dose independent rect. 21 6
216 54.85 radiation 1.0 270 < th dose independent rect. 21 6
221 54.85 temperature 10.0 270 > th dose independent rect. 3 18
222 54.85 radiation 1.0 270 < th dose dependent rect. 21 6
227 54.86 radiation 30.0 90 < th dose independent rect. 5 2
230 54.87 temperature 10.0 90 > th dose independent rect. 5 2
232 54.87 temperature 30.0 90 < th dose independent rect. 5 2
233 54.87 humidity 50.0 90 > th dose independent rect. 5 2
235 54.87 atmosphere 995.0 90 > th dose independent rect. 5 2
236 54.87 atmosphere 1015.0 90 < th dose independent rect. 5 2
239 54.87 temperature 10.0 90 > th dose independent rect. 7 22
240 54.87 wind 9.0 90 < th dose dependent rect. 5 2
244 54.91 wind 1.0 270 > th dose independent rect. 3 4
250 54.97 temperature 30.0 90 < th dose independent rect. 5 4
253 54.98 temperature 10.0 270 > th dose dependent rect. 7 8
259 55.04 atmosphere 1000.0 10 > th dose dependent rect. 5 4
261 55.06 wind 7.0 270 < th dose independent rect. 9 17
262 55.07 wind 5.0 90 < th dose independent rect. 5 4
282 55.28 wind 9.0 90 < th dose dependent rect. 5 4
285 55.32 radiation 1.0 90 < th dose independent rect. 21 8
288 55.32 radiation 40.0 270 < th dose dependent rect. 3 17
290 55.33 radiation 10.0 90 < th dose dependent rect. 21 8
301 55.38 wind 9.0 90 < th dose independent rect. 21 8
306 55.40 temperature 10.0 90 > th dose independent rect. 21 8
307 55.40 temperature 30.0 90 < th dose independent rect. 21 8
308 55.40 humidity 50.0 90 > th dose independent rect. 21 8
311 55.40 atmosphere 995.0 90 > th dose independent rect. 21 8
315 55.40 temperature 10.0 90 > th dose independent rect. 5 16
316 55.40 atmosphere 1015.0 90 < th dose independent rect. 5 16
322 55.42 humidity 50.0 90 > th dose dependent rect. 5 4
335 55.43 atmosphere 1015.0 270 < th dose independent rect. 3 17
341 55.43 radiation 1.0 90 < th dose dependent rect. 21 10
343 55.44 wind 9.0 270 < th dose dependent rect. 3 4
354 55.51 atmosphere 995.0 270 > th dose independent rect. 7 9
370 55.61 radiation 20.0 270 < th dose dependent rect. 4 2
411 55.75 precipitation 0.1 270 < th dose independent rect. 9 17
412 55.75 precipitation 0.1 270 < th dose dependent rect. 9 17
416 55.77 precipitation 0.1 90 < th dose independent rect. 5 4
417 55.77 precipitation 0.1 90 < th dose dependent rect. 5 4
426 55.80 temperature 10.0 90 > th dose independent rect. 5 4
429 55.80 atmosphere 995.0 90 > th dose independent rect. 5 4
430 55.80 atmosphere 1015.0 90 < th dose independent rect. 5 4
441 55.80 temperature 10.0 90 > th dose independent rect. 9 20
446 55.81 wind 9.0 270 < th dose dependent rect. 21 5
467 55.87 humidity 50.0 270 > th dose dependent rect. 3 4
486 55.96 temperature 30.0 270 < th dose independent rect. 2 7
487 55.97 radiation 1.0 90 < th dose dependent sin 10 NA
553 56.21 wind 9.0 270 < th dose independent rect. 3 18
588 56.30 radiation 1.0 90 < th dose independent rect. 21 10
610 56.45 humidity 50.0 90 > th dose dependent rect. 5 2
628 56.48 radiation 40.0 270 < th dose independent rect. 2 19
655 56.54 humidity 70.0 270 > th dose independent rect. 2 7
656 56.54 precipitation 0.1 270 < th dose independent rect. 17 14
658 56.54 precipitation 0.1 270 < th dose dependent rect. 17 14
678 56.62 wind 9.0 90 < th dose independent rect. 5 16
681 56.62 radiation 10.0 10 < th dose dependent rect. 22 8
683 56.63 atmosphere 995.0 270 > th dose independent rect. 3 17
708 56.70 wind 7.0 270 < th dose independent rect. 2 7
758 56.84 radiation 1.0 90 > th dose dependent rect. 4 3
774 56.86 radiation 1.0 270 < th dose independent rect. 3 17
784 56.89 wind 1.0 90 > th dose independent rect. 5 2
785 56.89 atmosphere 1005.0 90 > th dose independent rect. 5 2
787 56.89 temperature 10.0 270 > th dose independent rect. 2 7
789 56.89 humidity 50.0 270 > th dose independent rect. 2 7
790 56.89 atmosphere 995.0 270 > th dose independent rect. 2 7
791 56.89 atmosphere 1015.0 270 < th dose independent rect. 2 7
792 56.89 temperature 10.0 270 > th dose independent rect. 9 17
800 56.94 radiation 1.0 30 > th dose independent rect. 9 10
818 56.98 atmosphere 1015.0 270 < th dose independent rect. 21 6
861 57.04 radiation 40.0 90 < th dose dependent rect. 5 17
892 57.12 precipitation 0.1 270 < th dose independent rect. 3 18
894 57.12 precipitation 0.1 270 < th dose dependent rect. 3 18
938 57.19 radiation 1.0 90 < th dose independent sin 10 NA
941 57.19 radiation 40.0 90 < th dose dependent rect. 5 6
944 57.20 humidity 50.0 90 > th dose dependent rect. 5 16
946 57.22 atmosphere 995.0 90 > th dose independent rect. 7 22
955 57.25 precipitation 0.1 90 < th dose independent rect. 5 16
956 57.25 precipitation 0.1 90 < th dose dependent rect. 5 16
966 57.29 atmosphere 1015.0 270 < th dose independent rect. 7 20
982 57.31 temperature 30.0 90 < th dose dependent rect. 5 16
998 57.39 wind 1.0 270 > th dose independent rect. 7 9