FiT-DB / Search/ Help/ Sample detail

Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os01g0754800

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 2.95 (0.0359) R2 : 0.0026
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.0824 (0.0755) R2dN8 : 0.00336 R2N8 : 0.0026
σ : 0.675
deviance : 209.38
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = atmosphere, response mode = > th, dose dependency = dose dependent, type of G = rect.)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
175.94 0.623 2.94 0.155 0.12 2.82 0.53 5.95 -0.0441 17.3 1008 42 7.33 0.684
185.53 0.634 2.95 0.217 0.115 3.66 0.192 -- -0.0276 16.3 1008 29 7.28 0.583
176.62 0.619 2.94 0.156 0.122 2.82 -- 5.71 -0.0417 17 1008 41 7.32 0.703
185.59 0.634 2.94 0.205 0.124 3.57 -- -- -0.0335 17 1008 28 7.3 0.547
177.4 0.62 2.94 0.152 -- 2.77 -- 5.76 -0.0452 -- 1008 41 7.32 0.696
207.49 0.675 2.95 0.219 0.0785 -- 0.234 -- -0.0572 13.9 -- -- -- --
207.69 0.675 2.95 0.226 0.0811 -- -- -- -0.0556 14.6 -- -- -- --
186.36 0.636 2.94 0.203 -- 3.52 -- -- -0.0366 -- 1008 28 7.28 0.533
186.01 0.635 2.95 -- 0.12 3.75 -- -- -0.0557 17.1 1008 28 7.23 0.317
208.07 0.674 2.95 0.223 -- -- -- -- -0.0577 -- -- -- -- --
209.04 0.676 2.95 -- 0.0767 -- -- -- -0.0808 14.5 -- -- -- --
186.76 0.636 2.95 -- -- 3.71 -- -- -0.0567 -- 1008 28 7.24 0.3
209.38 0.675 2.95 -- -- -- -- -- -0.0824 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 185.48 atmosphere 1005.0 10 > th dose dependent rect. 7 1
3 187.23 wind 1.0 10 < th dose independent rect. 8 1
5 187.23 wind 1.0 10 < th dose dependent rect. 8 1
7 187.31 temperature 25.0 10 < th dose dependent rect. 7 10
8 187.37 temperature 20.0 90 < th dose independent rect. 7 12
9 187.42 temperature 25.0 10 < th dose dependent rect. 16 1
17 188.08 temperature 20.0 90 < th dose dependent rect. 6 14
21 188.19 temperature 25.0 90 < th dose independent rect. 15 1
54 189.62 atmosphere 1005.0 90 > th dose dependent rect. 15 1
56 189.75 temperature 20.0 10 < th dose independent rect. 7 8
67 189.92 temperature 25.0 90 < th dose dependent rect. 7 1
74 190.00 temperature 25.0 10 < th dose dependent rect. 8 1
77 190.02 temperature 20.0 10 < th dose dependent rect. 7 5
79 190.03 temperature 20.0 10 < th dose independent rect. 7 5
84 190.04 wind 5.0 10 > th dose independent rect. 8 1
86 190.04 temperature 20.0 10 < th dose independent rect. 8 2
93 190.04 wind 5.0 10 > th dose dependent rect. 8 1
257 191.93 radiation 10.0 90 < th dose independent rect. 6 2
279 193.16 humidity 90.0 1440 < th dose independent rect. 4 2
292 193.70 radiation 20.0 10 < th dose independent rect. 7 1
305 194.15 atmosphere 1005.0 10 > th dose independent rect. 7 1
327 194.59 atmosphere 995.0 14400 > th dose independent sin 8 NA
329 194.60 atmosphere 995.0 14400 < th dose dependent rect. 18 6
332 194.64 atmosphere 995.0 14400 < th dose dependent sin 11 NA
333 194.65 atmosphere 995.0 14400 < th dose dependent rect. 17 12
345 194.72 atmosphere 995.0 14400 < th dose independent sin 9 NA
349 194.76 atmosphere 995.0 14400 > th dose independent rect. 22 15
352 194.78 atmosphere 995.0 14400 < th dose independent sin 7 NA
353 194.79 wind 1.0 90 < th dose independent rect. 6 1
366 194.88 atmosphere 995.0 14400 > th dose independent rect. 19 18
368 194.88 atmosphere 995.0 14400 < th dose dependent rect. 24 15
378 194.98 atmosphere 1015.0 1440 < th dose independent rect. 6 5
380 194.98 atmosphere 995.0 14400 < th dose dependent sin 5 NA
388 195.04 radiation 40.0 10 > th dose dependent rect. 14 1
426 195.05 atmosphere 1015.0 1440 < th dose independent rect. 9 2
427 195.05 temperature 25.0 270 < th dose independent rect. 12 4
452 195.24 atmosphere 1015.0 1440 > th dose independent rect. 10 1
468 195.24 atmosphere 1015.0 1440 > th dose dependent rect. 10 1
483 195.25 temperature 25.0 90 < th dose dependent rect. 6 17
486 195.28 atmosphere 1005.0 90 > th dose dependent rect. 14 6
508 195.46 temperature 25.0 270 < th dose dependent rect. 12 4
510 195.48 humidity 80.0 90 < th dose dependent rect. 6 1
512 195.50 precipitation 0.1 4320 < th dose independent rect. 8 1
513 195.50 precipitation 0.1 4320 < th dose dependent rect. 8 1
518 195.53 atmosphere 995.0 14400 < th dose independent rect. 18 12
557 195.78 humidity 90.0 1440 < th dose dependent rect. 4 1
566 195.88 wind 3.0 90 > th dose dependent rect. 6 1
568 195.90 humidity 90.0 1440 > th dose independent rect. 4 1
581 196.09 temperature 20.0 270 < th dose independent rect. 4 16
594 196.18 atmosphere 995.0 14400 > th dose independent rect. 18 14
596 196.19 precipitation 0.1 4320 > th dose independent rect. 16 2
599 196.21 temperature 25.0 10 < th dose dependent sin 22 NA
600 196.22 precipitation 0.1 4320 < th dose independent rect. 12 1
601 196.22 precipitation 0.1 4320 < th dose dependent rect. 12 1
609 196.29 humidity 90.0 1440 > th dose independent rect. 3 3
614 196.33 precipitation 0.1 4320 > th dose dependent rect. 16 2
618 196.35 precipitation 0.1 4320 < th dose independent rect. 16 2
619 196.35 precipitation 0.1 4320 < th dose dependent rect. 16 2
629 196.41 temperature 25.0 90 < th dose dependent sin 23 NA
658 196.66 radiation 30.0 90 < th dose dependent rect. 7 1
693 196.74 humidity 80.0 90 < th dose independent rect. 6 1
700 196.80 temperature 30.0 90 < th dose dependent rect. 14 18
717 196.93 atmosphere 1000.0 10 < th dose independent rect. 13 1
722 196.94 temperature 30.0 90 < th dose independent rect. 14 18
728 196.99 radiation 40.0 10 > th dose independent rect. 14 1
734 196.99 temperature 20.0 270 < th dose independent rect. 4 4
769 197.05 radiation 30.0 10 < th dose dependent rect. 7 1
785 197.10 humidity 70.0 1440 > th dose dependent rect. 4 1
797 197.19 humidity 70.0 1440 > th dose dependent rect. 3 3
806 197.24 atmosphere 1005.0 270 > th dose dependent rect. 4 1
831 197.31 atmosphere 995.0 14400 > th dose independent rect. 2 2
836 197.34 temperature 20.0 270 < th dose independent rect. 4 10
844 197.36 atmosphere 995.0 14400 > th dose independent rect. 21 2
869 197.41 atmosphere 995.0 14400 > th dose independent rect. 22 6
882 197.44 atmosphere 1005.0 270 > th dose dependent rect. 12 5
895 197.48 atmosphere 995.0 14400 > th dose independent rect. 22 9
899 197.48 humidity 80.0 720 < th dose dependent rect. 6 1
902 197.49 atmosphere 995.0 14400 > th dose independent rect. 2 5
906 197.50 atmosphere 1005.0 30 > th dose independent rect. 15 2
932 197.56 temperature 20.0 270 < th dose independent sin 0 NA
934 197.56 atmosphere 995.0 14400 > th dose independent rect. 5 2
936 197.56 precipitation 0.1 4320 < th dose independent rect. 7 5
939 197.56 precipitation 0.1 4320 < th dose dependent rect. 7 5
964 197.62 precipitation 0.1 4320 > th dose dependent rect. 8 10
981 197.68 atmosphere 995.0 14400 < th dose independent rect. 1 1
986 197.68 atmosphere 995.0 14400 < th dose independent rect. 21 1