Os01g0754200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Glycosyl transferase, family 48 protein.
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Os01g0754200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Glycosyl transferase, family 48 protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 34.79 | 0.277 | 10.6 | 2.18 | 0.176 | -0.0241 | -0.688 | 1.71 | 0.571 | 18.4 | 21.7 | 2338 | -- | -- |
| 40.59 | 0.297 | 10.7 | 1.74 | 0.147 | -0.16 | -0.744 | -- | 0.484 | 17.2 | 22.8 | 10129 | -- | -- |
| 35.68 | 0.278 | 10.6 | 2.2 | 0.173 | -0.028 | -- | 1.72 | 0.572 | 19.2 | 21.72 | 2485 | -- | -- |
| 39.18 | 0.292 | 10.7 | 1.89 | 0.205 | -0.417 | -- | -- | 0.456 | 19.6 | 14.8 | 27092 | -- | -- |
| 37.37 | 0.285 | 10.6 | 2.2 | -- | -0.0274 | -- | 1.71 | 0.569 | -- | 21.76 | 2477 | -- | -- |
| 41.52 | 0.302 | 10.7 | 1.63 | 0.172 | -- | -0.683 | -- | 0.415 | 17.8 | -- | -- | -- | -- |
| 42.41 | 0.305 | 10.7 | 1.64 | 0.18 | -- | -- | -- | 0.412 | 19.2 | -- | -- | -- | -- |
| 40.42 | 0.296 | 10.7 | 2.07 | -- | -0.513 | -- | -- | 0.532 | -- | 14.29 | 47520 | -- | -- |
| 61.43 | 0.365 | 10.9 | -- | 0.148 | 1.05 | -- | -- | -0.132 | 20.1 | 21.58 | 47520 | -- | -- |
| 44.12 | 0.31 | 10.7 | 1.63 | -- | -- | -- | -- | 0.408 | -- | -- | -- | -- | -- |
| 113.04 | 0.497 | 10.8 | -- | 0.166 | -- | -- | -- | 0.229 | 19.8 | -- | -- | -- | -- |
| 62.75 | 0.369 | 10.8 | -- | -- | 1.05 | -- | -- | -0.135 | -- | 21.7 | 47520 | -- | -- |
| 114.53 | 0.5 | 10.8 | -- | -- | -- | -- | -- | 0.227 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 34.16 | radiation | 1.0 | 4320 | < th | dose independent | rect. | 18 | 8 |
| 3 | 34.18 | radiation | 1.0 | 4320 | < th | dose independent | rect. | 18 | 10 |
| 5 | 34.23 | radiation | 1.0 | 4320 | < th | dose independent | rect. | 18 | 3 |
| 11 | 34.30 | radiation | 1.0 | 4320 | > th | dose independent | rect. | 18 | 1 |
| 23 | 34.62 | temperature | 20.0 | 1440 | > th | dose dependent | rect. | 20 | 1 |
| 24 | 34.68 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 23 | 3 |
| 26 | 34.74 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 24 | 1 |
| 27 | 34.78 | wind | 1.0 | 43200 | < th | dose independent | rect. | 2 | 7 |
| 30 | 34.86 | temperature | 25.0 | 1440 | < th | dose dependent | rect. | 20 | 7 |
| 33 | 34.87 | temperature | 15.0 | 1440 | > th | dose dependent | rect. | 2 | 1 |
| 48 | 34.92 | temperature | 25.0 | 1440 | < th | dose dependent | rect. | 21 | 1 |
| 51 | 34.93 | humidity | 90.0 | 43200 | < th | dose independent | rect. | 5 | 3 |
| 54 | 34.96 | temperature | 25.0 | 1440 | < th | dose dependent | rect. | 2 | 1 |
| 57 | 34.97 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 19 | 1 |
| 66 | 35.01 | wind | 1.0 | 43200 | < th | dose independent | rect. | 5 | 1 |
| 67 | 35.01 | temperature | 25.0 | 1440 | < th | dose dependent | rect. | 23 | 4 |
| 72 | 35.02 | humidity | 80.0 | 43200 | > th | dose dependent | rect. | 5 | 5 |
| 74 | 35.03 | temperature | 25.0 | 270 | > th | dose dependent | sin | 0 | NA |
| 77 | 35.03 | temperature | 15.0 | 1440 | > th | dose dependent | rect. | 20 | 8 |
| 78 | 35.03 | temperature | 20.0 | 1440 | > th | dose dependent | rect. | 17 | 10 |
| 80 | 35.03 | temperature | 20.0 | 1440 | > th | dose dependent | rect. | 16 | 13 |
| 91 | 35.05 | temperature | 25.0 | 270 | > th | dose dependent | rect. | 8 | 10 |
| 93 | 35.05 | temperature | 25.0 | 270 | > th | dose dependent | rect. | 8 | 13 |
| 97 | 35.06 | temperature | 25.0 | 270 | > th | dose dependent | rect. | 8 | 8 |
| 131 | 35.10 | temperature | 20.0 | 1440 | > th | dose dependent | rect. | 17 | 7 |
| 154 | 35.13 | temperature | 20.0 | 1440 | > th | dose dependent | sin | 13 | NA |
| 183 | 35.14 | temperature | 25.0 | 270 | > th | dose dependent | rect. | 8 | 19 |
| 185 | 35.15 | temperature | 10.0 | 1440 | > th | dose dependent | rect. | 21 | 1 |
| 203 | 35.15 | temperature | 25.0 | 270 | > th | dose dependent | rect. | 17 | 23 |
| 242 | 35.18 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 22 | 6 |
| 262 | 35.19 | temperature | 25.0 | 270 | > th | dose dependent | rect. | 19 | 23 |
| 300 | 35.23 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 23 | 4 |
| 343 | 35.26 | temperature | 25.0 | 270 | > th | dose dependent | rect. | 24 | 21 |
| 344 | 35.27 | humidity | 90.0 | 14400 | < th | dose independent | rect. | 23 | 2 |
| 358 | 35.28 | humidity | 90.0 | 14400 | < th | dose independent | rect. | 22 | 6 |
| 368 | 35.28 | temperature | 25.0 | 270 | > th | dose dependent | rect. | 24 | 18 |
| 383 | 35.30 | temperature | 25.0 | 90 | > th | dose dependent | sin | 20 | NA |
| 384 | 35.30 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 5 | 1 |
| 418 | 35.32 | humidity | 90.0 | 43200 | < th | dose independent | rect. | 4 | 6 |
| 419 | 35.32 | temperature | 25.0 | 1440 | < th | dose dependent | sin | 12 | NA |
| 430 | 35.32 | temperature | 20.0 | 720 | > th | dose dependent | rect. | 23 | 16 |
| 454 | 35.33 | temperature | 15.0 | 10 | > th | dose dependent | rect. | 12 | 18 |
| 478 | 35.35 | wind | 1.0 | 14400 | < th | dose independent | rect. | 2 | 2 |
| 505 | 35.36 | radiation | 1.0 | 4320 | < th | dose dependent | rect. | 18 | 8 |
| 520 | 35.37 | wind | 3.0 | 43200 | < th | dose independent | rect. | 12 | 1 |
| 549 | 35.38 | temperature | 25.0 | 270 | > th | dose dependent | no | NA | NA |
| 573 | 35.39 | radiation | 1.0 | 4320 | < th | dose dependent | rect. | 18 | 3 |
| 672 | 35.44 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 11 | 2 |
| 683 | 35.45 | humidity | 90.0 | 43200 | > th | dose independent | rect. | 5 | 2 |
| 713 | 35.46 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 19 | 1 |
| 733 | 35.47 | radiation | 1.0 | 14400 | < th | dose dependent | rect. | 4 | 2 |
| 745 | 35.47 | radiation | 1.0 | 14400 | < th | dose dependent | rect. | 20 | 10 |
| 786 | 35.50 | wind | 1.0 | 43200 | > th | dose independent | rect. | 5 | 1 |
| 787 | 35.50 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 5 | 1 |
| 854 | 35.53 | temperature | 20.0 | 720 | > th | dose dependent | sin | 5 | NA |
| 870 | 35.54 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 19 | 1 |
| 874 | 35.54 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 19 | 1 |