Os01g0753500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Transcriptional factor B3 family protein.
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Os01g0753500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Transcriptional factor B3 family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 36.8 | 0.285 | 11.5 | 0.691 | 0.754 | 1.42 | 0.304 | -1.24 | 0.0556 | 8.42 | 21 | 1318 | -- | -- |
| 38.24 | 0.288 | 11.4 | 0.964 | 0.921 | 1.51 | 0.322 | -- | 0.14 | 7.89 | 19.41 | 2032 | -- | -- |
| 37.06 | 0.284 | 11.5 | 0.663 | 0.751 | 1.41 | -- | -1.38 | 0.0483 | 8.34 | 21.32 | 1330 | -- | -- |
| 38.53 | 0.289 | 11.4 | 1.02 | 0.914 | 1.44 | -- | -- | 0.144 | 7.7 | 20.1 | 1943 | -- | -- |
| 67.27 | 0.382 | 11.5 | 0.717 | -- | 1.41 | -- | -1.07 | 0.0551 | -- | 20.75 | 1415 | -- | -- |
| 95.48 | 0.458 | 11.4 | 1.53 | 0.756 | -- | 0.251 | -- | 0.467 | 7.56 | -- | -- | -- | -- |
| 95.65 | 0.458 | 11.4 | 1.54 | 0.757 | -- | -- | -- | 0.466 | 7.52 | -- | -- | -- | -- |
| 68.1 | 0.384 | 11.4 | 0.992 | -- | 1.42 | -- | -- | 0.139 | -- | 19.36 | 1424 | -- | -- |
| 46.73 | 0.318 | 11.5 | -- | 0.762 | 2.16 | -- | -- | -0.214 | 8.06 | 10.73 | 8347 | -- | -- |
| 126.32 | 0.525 | 11.4 | 1.55 | -- | -- | -- | -- | 0.478 | -- | -- | -- | -- | -- |
| 158.19 | 0.588 | 11.4 | -- | 0.771 | -- | -- | -- | 0.295 | 7.39 | -- | -- | -- | -- |
| 76.67 | 0.408 | 11.5 | -- | -- | 2.17 | -- | -- | -0.213 | -- | 8.72 | 8619 | -- | -- |
| 189.83 | 0.643 | 11.4 | -- | -- | -- | -- | -- | 0.306 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 36.47 | temperature | 20 | 1440 | > th | dose dependent | rect. | 12 | 19 |
| 22 | 37.04 | temperature | 10 | 720 | > th | dose dependent | rect. | 13 | 18 |
| 41 | 37.31 | temperature | 20 | 1440 | > th | dose dependent | rect. | 24 | 21 |
| 50 | 37.35 | temperature | 20 | 1440 | > th | dose dependent | rect. | 22 | 21 |
| 64 | 37.39 | temperature | 20 | 1440 | > th | dose dependent | no | NA | NA |
| 70 | 37.43 | temperature | 20 | 1440 | > th | dose dependent | sin | 16 | NA |
| 74 | 37.43 | temperature | 20 | 1440 | > th | dose dependent | rect. | 18 | 23 |
| 102 | 37.54 | temperature | 20 | 1440 | > th | dose dependent | rect. | 15 | 23 |
| 218 | 38.16 | temperature | 20 | 1440 | > th | dose dependent | rect. | 5 | 2 |
| 336 | 38.46 | temperature | 30 | 4320 | < th | dose dependent | rect. | 2 | 7 |
| 339 | 38.47 | temperature | 10 | 4320 | > th | dose dependent | rect. | 2 | 7 |
| 360 | 38.50 | temperature | 10 | 4320 | > th | dose dependent | rect. | 3 | 5 |
| 364 | 38.51 | temperature | 30 | 4320 | < th | dose dependent | rect. | 6 | 1 |
| 365 | 38.51 | temperature | 30 | 4320 | < th | dose dependent | rect. | 3 | 5 |
| 402 | 38.57 | temperature | 10 | 4320 | > th | dose dependent | rect. | 6 | 1 |
| 443 | 38.63 | temperature | 20 | 1440 | > th | dose dependent | sin | 4 | NA |
| 459 | 38.65 | temperature | 10 | 4320 | > th | dose dependent | rect. | 17 | 15 |
| 487 | 38.70 | temperature | 10 | 4320 | > th | dose dependent | rect. | 21 | 12 |
| 488 | 38.70 | temperature | 30 | 4320 | < th | dose dependent | rect. | 21 | 12 |
| 574 | 38.80 | temperature | 10 | 4320 | > th | dose dependent | sin | 10 | NA |
| 626 | 38.86 | temperature | 30 | 4320 | < th | dose dependent | sin | 10 | NA |
| 979 | 39.24 | temperature | 25 | 1440 | < th | dose independent | rect. | 5 | 19 |