Os01g0753200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os01g0753200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 43.44 | 0.31 | 10.5 | -0.443 | 0.92 | 0.548 | 0.307 | -0.555 | -0.156 | 21.8 | 19.7 | 2773 | -- | -- |
| 43.79 | 0.308 | 10.4 | -0.408 | 0.926 | 0.683 | 0.241 | -- | -0.139 | 21.9 | 19.6 | 3193 | -- | -- |
| 43.78 | 0.308 | 10.5 | -0.458 | 0.921 | 0.548 | -- | -0.561 | -0.159 | 21.8 | 19.66 | 2844 | -- | -- |
| 44.03 | 0.309 | 10.5 | -0.42 | 0.915 | 0.715 | -- | -- | -0.149 | 21.9 | 19.4 | 3271 | -- | -- |
| 74.2 | 0.401 | 10.5 | -0.425 | -- | 0.818 | -- | -0.58 | -0.305 | -- | 25.3 | 739 | -- | -- |
| 51.67 | 0.337 | 10.4 | -0.0236 | 0.925 | -- | 0.311 | -- | 0.0127 | 21.9 | -- | -- | -- | -- |
| 52.04 | 0.338 | 10.4 | -0.036 | 0.923 | -- | -- | -- | 0.0119 | 21.9 | -- | -- | -- | -- |
| 74.78 | 0.403 | 10.5 | -0.263 | -- | 0.79 | -- | -- | -0.274 | -- | 25.28 | 736 | -- | -- |
| 46.87 | 0.319 | 10.4 | -- | 0.901 | 0.556 | -- | -- | -0.0872 | 21.7 | 18.5 | 2890 | -- | -- |
| 103.11 | 0.474 | 10.4 | -0.0254 | -- | -- | -- | -- | 0.0119 | -- | -- | -- | -- | -- |
| 52.07 | 0.338 | 10.4 | -- | 0.923 | -- | -- | -- | 0.0159 | 21.9 | -- | -- | -- | -- |
| 76.51 | 0.407 | 10.4 | -- | -- | 0.746 | -- | -- | -0.231 | -- | 25.29 | 736 | -- | -- |
| 103.13 | 0.474 | 10.4 | -- | -- | -- | -- | -- | 0.0148 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 40.67 | humidity | 80.0 | 14400 | > th | dose dependent | rect. | 24 | 1 |
| 2 | 41.09 | humidity | 80.0 | 14400 | > th | dose dependent | rect. | 23 | 4 |
| 6 | 41.33 | humidity | 80.0 | 14400 | > th | dose dependent | rect. | 23 | 8 |
| 8 | 41.41 | humidity | 50.0 | 14400 | > th | dose dependent | rect. | 24 | 1 |
| 18 | 41.72 | humidity | 50.0 | 14400 | > th | dose dependent | rect. | 23 | 4 |
| 25 | 41.86 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 23 | 2 |
| 26 | 41.86 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 5 | 2 |
| 32 | 41.88 | temperature | 20.0 | 1440 | > th | dose independent | rect. | 1 | 6 |
| 37 | 41.93 | temperature | 20.0 | 1440 | > th | dose independent | rect. | 3 | 1 |
| 38 | 41.93 | temperature | 20.0 | 1440 | < th | dose independent | rect. | 1 | 6 |
| 39 | 41.93 | temperature | 20.0 | 1440 | < th | dose independent | rect. | 23 | 8 |
| 54 | 41.97 | humidity | 90.0 | 14400 | < th | dose independent | rect. | 23 | 8 |
| 60 | 42.00 | temperature | 20.0 | 1440 | < th | dose independent | rect. | 3 | 1 |
| 62 | 42.03 | temperature | 20.0 | 1440 | > th | dose independent | rect. | 5 | 1 |
| 88 | 42.12 | humidity | 90.0 | 14400 | < th | dose independent | rect. | 23 | 1 |
| 106 | 42.16 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 23 | 8 |
| 122 | 42.22 | temperature | 20.0 | 1440 | < th | dose independent | rect. | 5 | 1 |
| 159 | 42.28 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 23 | 16 |
| 182 | 42.38 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 5 | 2 |
| 199 | 42.41 | humidity | 90.0 | 14400 | < th | dose independent | rect. | 2 | 5 |
| 200 | 42.41 | humidity | 90.0 | 14400 | < th | dose independent | rect. | 22 | 6 |
| 219 | 42.44 | humidity | 50.0 | 14400 | > th | dose dependent | rect. | 23 | 8 |
| 224 | 42.46 | temperature | 20.0 | 4320 | < th | dose independent | rect. | 21 | 1 |
| 225 | 42.46 | humidity | 90.0 | 14400 | < th | dose independent | rect. | 23 | 4 |
| 237 | 42.48 | wind | 1.0 | 14400 | < th | dose dependent | rect. | 23 | 3 |
| 238 | 42.49 | temperature | 20.0 | 4320 | > th | dose independent | rect. | 21 | 1 |
| 258 | 42.52 | humidity | 60.0 | 43200 | < th | dose independent | rect. | 20 | 13 |
| 259 | 42.53 | temperature | 20.0 | 1440 | < th | dose independent | sin | 10 | NA |
| 269 | 42.54 | temperature | 20.0 | 1440 | > th | dose independent | sin | 9 | NA |
| 295 | 42.57 | humidity | 60.0 | 43200 | > th | dose independent | rect. | 20 | 13 |
| 303 | 42.59 | humidity | 90.0 | 14400 | < th | dose independent | rect. | 5 | 2 |
| 352 | 42.66 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 23 | 16 |
| 365 | 42.68 | humidity | 90.0 | 14400 | < th | dose independent | rect. | 23 | 16 |
| 366 | 42.68 | humidity | 90.0 | 14400 | > th | dose dependent | sin | 5 | NA |
| 405 | 42.73 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 23 | 14 |
| 507 | 42.89 | temperature | 15.0 | 1440 | > th | dose dependent | rect. | 2 | 1 |
| 528 | 42.91 | temperature | 25.0 | 1440 | < th | dose dependent | rect. | 2 | 1 |
| 585 | 42.99 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 2 | 6 |
| 601 | 43.01 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 2 | 6 |
| 609 | 43.01 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 2 | 6 |
| 627 | 43.05 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 2 | 6 |
| 677 | 43.11 | humidity | 70.0 | 43200 | < th | dose dependent | rect. | 20 | 13 |
| 721 | 43.15 | humidity | 70.0 | 43200 | < th | dose dependent | rect. | 21 | 11 |
| 749 | 43.19 | wind | 1.0 | 14400 | < th | dose independent | rect. | 23 | 3 |
| 763 | 43.21 | humidity | 90.0 | 14400 | < th | dose independent | sin | 8 | NA |
| 814 | 43.25 | humidity | 50.0 | 14400 | > th | dose dependent | rect. | 5 | 2 |
| 837 | 43.28 | humidity | 80.0 | 43200 | > th | dose independent | rect. | 18 | 1 |
| 891 | 43.33 | humidity | 80.0 | 43200 | < th | dose independent | rect. | 17 | 1 |
| 896 | 43.34 | humidity | 90.0 | 14400 | > th | dose independent | sin | 7 | NA |
| 946 | 43.38 | humidity | 60.0 | 43200 | < th | dose independent | rect. | 7 | 2 |