Os01g0752600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Glycosyl transferase, family 19 protein.
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Os01g0752600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Glycosyl transferase, family 19 protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 32.04 | 0.266 | 8.78 | -0.201 | 0.248 | -0.629 | 0.734 | -2.58 | 0.121 | 15.3 | 14.64 | 434 | -- | -- |
| 35.12 | 0.276 | 8.73 | 0.204 | 0.275 | -0.578 | 0.445 | -- | 0.228 | 15.3 | 22.29 | 454 | -- | -- |
| 32.86 | 0.267 | 8.78 | -0.188 | 0.164 | -0.578 | -- | -2.43 | 0.115 | 15.7 | 7.281 | 647 | -- | -- |
| 35.59 | 0.278 | 8.73 | 0.217 | 0.248 | -0.579 | -- | -- | 0.229 | 16.2 | 22.45 | 548 | -- | -- |
| 33.69 | 0.27 | 8.79 | -0.227 | -- | -0.535 | -- | -2.43 | 0.102 | -- | 9.456 | 821 | -- | -- |
| 40.94 | 0.3 | 8.75 | 0.0639 | 0.164 | -- | 0.51 | -- | 0.135 | 11.5 | -- | -- | -- | -- |
| 42.04 | 0.304 | 8.75 | 0.0852 | 0.162 | -- | -- | -- | 0.137 | 11.9 | -- | -- | -- | -- |
| 36.47 | 0.281 | 8.74 | 0.22 | -- | -0.48 | -- | -- | 0.203 | -- | 23.88 | 1030 | -- | -- |
| 36.77 | 0.282 | 8.74 | -- | 0.253 | -0.537 | -- | -- | 0.199 | 15.8 | 22.25 | 487 | -- | -- |
| 43.7 | 0.309 | 8.75 | 0.0803 | -- | -- | -- | -- | 0.135 | -- | -- | -- | -- | -- |
| 42.23 | 0.304 | 8.75 | -- | 0.161 | -- | -- | -- | 0.128 | 11.8 | -- | -- | -- | -- |
| 37.65 | 0.286 | 8.74 | -- | -- | -0.433 | -- | -- | 0.17 | -- | 24.09 | 1001 | -- | -- |
| 43.87 | 0.309 | 8.75 | -- | -- | -- | -- | -- | 0.126 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 31.91 | temperature | 15 | 270 | > th | dose dependent | rect. | 11 | 22 |
| 4 | 32.01 | temperature | 10 | 720 | > th | dose dependent | rect. | 4 | 20 |
| 33 | 32.34 | temperature | 20 | 720 | > th | dose dependent | rect. | 19 | 21 |
| 48 | 32.39 | temperature | 10 | 720 | > th | dose dependent | rect. | 19 | 22 |
| 112 | 32.57 | temperature | 10 | 720 | > th | dose dependent | rect. | 11 | 14 |
| 145 | 32.63 | temperature | 10 | 270 | > th | dose dependent | no | NA | NA |
| 166 | 32.67 | temperature | 10 | 720 | > th | dose dependent | rect. | 12 | 19 |
| 181 | 32.69 | temperature | 25 | 720 | > th | dose dependent | sin | 7 | NA |
| 211 | 32.73 | temperature | 10 | 720 | > th | dose dependent | rect. | 21 | 23 |
| 242 | 32.77 | temperature | 30 | 720 | < th | dose dependent | rect. | 7 | 20 |
| 248 | 32.78 | temperature | 15 | 720 | > th | dose dependent | sin | 21 | NA |
| 333 | 32.88 | temperature | 20 | 720 | > th | dose dependent | rect. | 15 | 23 |
| 489 | 33.08 | temperature | 25 | 720 | > th | dose dependent | rect. | 5 | 10 |
| 686 | 33.28 | temperature | 30 | 720 | < th | dose dependent | rect. | 3 | 23 |
| 712 | 33.30 | temperature | 30 | 720 | < th | dose dependent | rect. | 1 | 22 |
| 767 | 33.35 | temperature | 30 | 720 | < th | dose dependent | rect. | 23 | 23 |
| 790 | 33.38 | temperature | 20 | 10 | > th | dose dependent | rect. | 15 | 18 |
| 795 | 33.39 | temperature | 30 | 720 | < th | dose dependent | no | NA | NA |
| 812 | 33.40 | temperature | 30 | 720 | < th | dose dependent | rect. | 12 | 23 |
| 840 | 33.44 | temperature | 30 | 720 | < th | dose dependent | rect. | 20 | 23 |
| 842 | 33.45 | temperature | 25 | 1440 | > th | dose dependent | rect. | 8 | 2 |
| 893 | 33.50 | temperature | 30 | 720 | < th | dose dependent | sin | 20 | NA |
| 921 | 33.53 | temperature | 30 | 720 | < th | dose dependent | rect. | 15 | 23 |
| 931 | 33.55 | temperature | 30 | 720 | < th | dose independent | sin | 3 | NA |
| 983 | 33.61 | temperature | 30 | 270 | > th | dose independent | rect. | 17 | 23 |
| 999 | 33.63 | temperature | 30 | 720 | > th | dose independent | rect. | 8 | 7 |