Os01g0752300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to 60S ribosomal protein L18a-1.
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Os01g0752300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to 60S ribosomal protein L18a-1.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 92.78 | 0.453 | 12.9 | 1.68 | 1.09 | 0.513 | 1 | -0.743 | 0.558 | 18.6 | 19.66 | 1310 | -- | -- |
| 94.07 | 0.452 | 12.9 | 1.68 | 1.09 | 0.519 | 1.07 | -- | 0.555 | 18.6 | 19.67 | 1300 | -- | -- |
| 95.21 | 0.454 | 12.9 | 1.67 | 1.09 | 0.521 | -- | -0.832 | 0.563 | 18.6 | 19.67 | 1300 | -- | -- |
| 96.94 | 0.459 | 12.9 | 1.67 | 1.1 | 0.497 | -- | -- | 0.557 | 18.6 | 19.67 | 1300 | -- | -- |
| 156.94 | 0.583 | 12.9 | 1.64 | -- | 0.574 | -- | -0.393 | 0.61 | -- | 6.186 | 1458 | -- | -- |
| 102.53 | 0.475 | 13 | 1.57 | 1.07 | -- | 1.04 | -- | 0.425 | 18.3 | -- | -- | -- | -- |
| 105.19 | 0.48 | 13 | 1.56 | 1.07 | -- | -- | -- | 0.429 | 18.2 | -- | -- | -- | -- |
| 156.71 | 0.583 | 12.9 | 1.71 | -- | 0.533 | -- | -- | 0.586 | -- | 10.33 | 1442 | -- | -- |
| 151.56 | 0.573 | 12.9 | -- | 0.986 | 0.67 | -- | -- | 0.448 | 18.5 | 19.99 | 25191 | -- | -- |
| 165.01 | 0.6 | 12.9 | 1.53 | -- | -- | -- | -- | 0.406 | -- | -- | -- | -- | -- |
| 169.36 | 0.609 | 13 | -- | 1.05 | -- | -- | -- | 0.255 | 18.3 | -- | -- | -- | -- |
| 176.57 | 0.619 | 13 | -- | -- | 1.13 | -- | -- | -0.0389 | -- | 59.97 | 47520 | -- | -- |
| 226.84 | 0.703 | 13 | -- | -- | -- | -- | -- | 0.236 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 82.47 | atmosphere | 1005.0 | 10 | > th | dose dependent | rect. | 3 | 6 |
| 2 | 82.56 | humidity | 90.0 | 10 | < th | dose independent | rect. | 2 | 7 |
| 3 | 82.74 | temperature | 10.0 | 30 | > th | dose dependent | rect. | 9 | 19 |
| 12 | 83.83 | atmosphere | 1005.0 | 270 | > th | dose dependent | rect. | 4 | 1 |
| 18 | 84.20 | atmosphere | 1005.0 | 270 | > th | dose dependent | rect. | 3 | 3 |
| 26 | 84.66 | wind | 5.0 | 30 | < th | dose independent | rect. | 4 | 5 |
| 30 | 85.01 | wind | 5.0 | 270 | < th | dose independent | rect. | 4 | 1 |
| 32 | 85.08 | wind | 5.0 | 270 | < th | dose independent | rect. | 3 | 3 |
| 33 | 85.15 | temperature | 10.0 | 30 | > th | dose dependent | rect. | 4 | 5 |
| 37 | 85.31 | temperature | 10.0 | 43200 | > th | dose independent | rect. | 10 | 6 |
| 47 | 85.61 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 4 | 5 |
| 48 | 85.61 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 4 | 5 |
| 49 | 85.65 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 9 | 5 |
| 52 | 85.70 | temperature | 10.0 | 30 | > th | dose independent | rect. | 4 | 5 |
| 54 | 85.70 | temperature | 30.0 | 30 | < th | dose independent | rect. | 4 | 5 |
| 55 | 85.70 | humidity | 50.0 | 30 | > th | dose independent | rect. | 4 | 5 |
| 57 | 85.70 | atmosphere | 995.0 | 30 | > th | dose independent | rect. | 4 | 5 |
| 58 | 85.70 | atmosphere | 1015.0 | 30 | < th | dose independent | rect. | 4 | 5 |
| 59 | 85.70 | temperature | 10.0 | 30 | > th | dose independent | rect. | 9 | 19 |
| 60 | 85.71 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 9 | 1 |
| 65 | 85.83 | wind | 9.0 | 30 | < th | dose independent | rect. | 9 | 19 |
| 74 | 86.03 | atmosphere | 995.0 | 30 | > th | dose independent | rect. | 9 | 19 |
| 94 | 86.12 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 3 | 3 |
| 95 | 86.12 | radiation | 40.0 | 30 | < th | dose independent | rect. | 4 | 5 |
| 96 | 86.12 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 3 | 3 |
| 99 | 86.17 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 9 | 19 |
| 100 | 86.17 | wind | 9.0 | 30 | < th | dose dependent | rect. | 4 | 5 |
| 101 | 86.17 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 9 | 19 |
| 104 | 86.22 | temperature | 20.0 | 10 | > th | dose independent | rect. | 9 | 19 |
| 114 | 86.40 | atmosphere | 1005.0 | 30 | > th | dose independent | rect. | 4 | 5 |
| 116 | 86.42 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 4 | 1 |
| 117 | 86.42 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 4 | 1 |
| 137 | 86.69 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 5 | 5 |
| 140 | 86.69 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 5 | 5 |
| 141 | 86.69 | atmosphere | 1015.0 | 1440 | < th | dose independent | rect. | 5 | 5 |
| 142 | 86.69 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 10 | 19 |
| 145 | 86.70 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 4 | 1 |
| 152 | 86.75 | atmosphere | 1015.0 | 30 | < th | dose independent | rect. | 9 | 19 |
| 168 | 86.91 | wind | 9.0 | 270 | < th | dose dependent | rect. | 4 | 1 |
| 170 | 86.94 | temperature | 10.0 | 270 | > th | dose independent | rect. | 4 | 1 |
| 172 | 86.94 | temperature | 30.0 | 270 | < th | dose independent | rect. | 4 | 1 |
| 173 | 86.94 | humidity | 50.0 | 270 | > th | dose independent | rect. | 4 | 1 |
| 176 | 86.94 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 4 | 1 |
| 177 | 86.94 | atmosphere | 1010.0 | 270 | < th | dose independent | rect. | 4 | 1 |
| 179 | 86.94 | radiation | 20.0 | 270 | < th | dose independent | rect. | 4 | 1 |
| 182 | 86.94 | temperature | 10.0 | 270 | > th | dose independent | rect. | 5 | 23 |
| 184 | 86.95 | radiation | 1.0 | 30 | > th | dose independent | rect. | 5 | 4 |
| 197 | 86.97 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 3 | 14 |
| 198 | 86.97 | radiation | 40.0 | 270 | < th | dose dependent | rect. | 4 | 1 |
| 199 | 86.97 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 3 | 14 |
| 201 | 86.98 | atmosphere | 1005.0 | 270 | > th | dose independent | rect. | 3 | 3 |
| 210 | 87.09 | radiation | 1.0 | 270 | < th | dose independent | rect. | 4 | 1 |
| 216 | 87.11 | temperature | 10.0 | 270 | > th | dose independent | rect. | 3 | 3 |
| 218 | 87.11 | temperature | 30.0 | 270 | < th | dose independent | rect. | 3 | 3 |
| 219 | 87.11 | humidity | 50.0 | 270 | > th | dose independent | rect. | 3 | 3 |
| 222 | 87.11 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 3 | 3 |
| 223 | 87.11 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 3 | 3 |
| 224 | 87.11 | radiation | 20.0 | 270 | < th | dose independent | rect. | 3 | 3 |
| 227 | 87.11 | temperature | 10.0 | 270 | > th | dose independent | rect. | 6 | 21 |
| 244 | 87.18 | precipitation | 0.1 | 10 | < th | dose independent | rect. | 14 | 19 |
| 245 | 87.18 | wind | 9.0 | 270 | < th | dose independent | rect. | 6 | 21 |
| 246 | 87.18 | precipitation | 0.1 | 10 | < th | dose dependent | rect. | 14 | 19 |
| 248 | 87.19 | temperature | 25.0 | 10 | > th | dose independent | rect. | 1 | 8 |
| 257 | 87.26 | radiation | 40.0 | 270 | < th | dose dependent | rect. | 3 | 3 |
| 262 | 87.29 | humidity | 50.0 | 30 | > th | dose independent | rect. | 9 | 19 |
| 269 | 87.34 | wind | 1.0 | 270 | > th | dose independent | rect. | 3 | 3 |
| 270 | 87.34 | radiation | 1.0 | 10 | > th | dose independent | rect. | 9 | 5 |
| 279 | 87.40 | wind | 9.0 | 270 | < th | dose dependent | rect. | 3 | 3 |
| 281 | 87.41 | atmosphere | 1005.0 | 270 | > th | dose independent | rect. | 4 | 1 |
| 290 | 87.45 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 9 | 5 |
| 291 | 87.45 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 9 | 5 |
| 292 | 87.46 | temperature | 10.0 | 10 | > th | dose independent | rect. | 9 | 5 |
| 294 | 87.46 | atmosphere | 995.0 | 10 | > th | dose independent | rect. | 9 | 5 |
| 295 | 87.46 | atmosphere | 1015.0 | 10 | < th | dose independent | rect. | 9 | 5 |
| 297 | 87.46 | temperature | 10.0 | 10 | > th | dose independent | rect. | 14 | 19 |
| 307 | 87.51 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 10 | 5 |
| 310 | 87.51 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 15 | 19 |
| 331 | 87.61 | radiation | 20.0 | 1440 | < th | dose dependent | rect. | 11 | 2 |
| 335 | 87.63 | wind | 9.0 | 30 | < th | dose independent | rect. | 9 | 5 |
| 341 | 87.65 | wind | 9.0 | 30 | < th | dose independent | rect. | 14 | 19 |
| 346 | 87.70 | wind | 1.0 | 30 | > th | dose independent | rect. | 9 | 5 |
| 361 | 87.74 | radiation | 20.0 | 1440 | < th | dose independent | rect. | 12 | 1 |
| 377 | 87.81 | humidity | 50.0 | 270 | > th | dose independent | rect. | 9 | 1 |
| 381 | 87.81 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 6 | 21 |
| 383 | 87.81 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 6 | 21 |
| 394 | 87.82 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 8 | 3 |
| 405 | 87.83 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 4 | 1 |
| 414 | 87.86 | radiation | 10.0 | 270 | < th | dose independent | rect. | 17 | 10 |
| 416 | 87.86 | wind | 9.0 | 270 | < th | dose independent | rect. | 5 | 23 |
| 433 | 87.88 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 6 | 21 |
| 452 | 87.94 | wind | 1.0 | 270 | > th | dose independent | rect. | 2 | 5 |
| 455 | 87.96 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 9 | 1 |
| 469 | 87.96 | radiation | 40.0 | 30 | < th | dose independent | rect. | 14 | 19 |
| 470 | 87.96 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 9 | 1 |
| 477 | 87.98 | radiation | 1.0 | 270 | > th | dose independent | rect. | 9 | 1 |
| 478 | 87.99 | wind | 9.0 | 270 | < th | dose independent | rect. | 9 | 1 |
| 480 | 87.99 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 17 | 10 |
| 482 | 88.00 | temperature | 10.0 | 270 | > th | dose independent | rect. | 9 | 1 |
| 484 | 88.00 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 9 | 1 |
| 485 | 88.00 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 9 | 1 |
| 487 | 88.00 | temperature | 10.0 | 270 | > th | dose independent | rect. | 10 | 23 |
| 498 | 88.07 | humidity | 50.0 | 270 | > th | dose dependent | rect. | 4 | 1 |
| 501 | 88.07 | radiation | 40.0 | 270 | < th | dose dependent | rect. | 17 | 10 |
| 503 | 88.08 | wind | 9.0 | 270 | < th | dose independent | rect. | 17 | 10 |
| 507 | 88.09 | humidity | 50.0 | 30 | > th | dose independent | rect. | 9 | 5 |
| 513 | 88.11 | temperature | 10.0 | 270 | > th | dose independent | rect. | 17 | 10 |
| 517 | 88.11 | temperature | 10.0 | 270 | > th | dose independent | rect. | 3 | 14 |
| 518 | 88.11 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 3 | 14 |
| 563 | 88.22 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 10 | 23 |
| 565 | 88.22 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 10 | 23 |
| 581 | 88.24 | humidity | 90.0 | 10 | < th | dose independent | rect. | 14 | 19 |
| 605 | 88.29 | wind | 1.0 | 30 | > th | dose independent | rect. | 4 | 5 |
| 640 | 88.34 | atmosphere | 995.0 | 30 | > th | dose independent | rect. | 14 | 19 |
| 659 | 88.36 | radiation | 20.0 | 1440 | < th | dose dependent | rect. | 11 | 4 |
| 671 | 88.42 | wind | 1.0 | 270 | > th | dose independent | rect. | 9 | 1 |
| 676 | 88.43 | humidity | 50.0 | 10 | > th | dose independent | rect. | 15 | 18 |
| 690 | 88.47 | humidity | 50.0 | 270 | > th | dose independent | rect. | 17 | 10 |
| 710 | 88.49 | humidity | 50.0 | 270 | > th | dose dependent | rect. | 18 | 9 |
| 715 | 88.52 | wind | 9.0 | 270 | < th | dose independent | rect. | 3 | 14 |
| 746 | 88.62 | atmosphere | 1005.0 | 90 | < th | dose dependent | rect. | 24 | 9 |
| 778 | 88.68 | humidity | 90.0 | 30 | < th | dose independent | rect. | 9 | 5 |
| 780 | 88.68 | radiation | 40.0 | 90 | < th | dose independent | rect. | 4 | 16 |
| 797 | 88.75 | radiation | 40.0 | 10 | < th | dose independent | rect. | 4 | 16 |
| 870 | 88.93 | atmosphere | 1005.0 | 10 | < th | dose dependent | rect. | 1 | 9 |
| 895 | 88.97 | humidity | 50.0 | 270 | > th | dose independent | rect. | 6 | 21 |
| 896 | 88.98 | humidity | 50.0 | 270 | > th | dose dependent | rect. | 3 | 3 |
| 906 | 89.01 | radiation | 40.0 | 10 | < th | dose independent | rect. | 12 | 21 |
| 909 | 89.04 | atmosphere | 1000.0 | 30 | > th | dose independent | rect. | 20 | 8 |
| 914 | 89.06 | wind | 9.0 | 270 | < th | dose dependent | rect. | 9 | 1 |
| 926 | 89.09 | radiation | 10.0 | 1440 | < th | dose dependent | rect. | 9 | 6 |
| 955 | 89.16 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 17 | 10 |
| 958 | 89.16 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 17 | 10 |