Os01g0751600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os01g0751600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 221.96 | 0.7 | 6.81 | 0.35 | 0.575 | 1.5 | 0.0932 | 1.89 | -1.18 | 7.6 | 68.66 | 6277 | -- | -- |
| 227.05 | 0.702 | 6.8 | 0.302 | 0.602 | 1.57 | -0.134 | -- | -1.2 | 7.39 | 68.18 | 6306 | -- | -- |
| 221.98 | 0.694 | 6.81 | 0.351 | 0.576 | 1.5 | -- | 1.87 | -1.19 | 7.55 | 68.69 | 6277 | -- | -- |
| 227.09 | 0.702 | 6.8 | 0.3 | 0.6 | 1.56 | -- | -- | -1.2 | 7.47 | 68.24 | 6309 | -- | -- |
| 235.57 | 0.715 | 6.83 | 0.351 | -- | 1.41 | -- | 2.01 | -1.23 | -- | 69.07 | 5881 | -- | -- |
| 265.16 | 0.763 | 6.78 | 0.178 | 0.45 | -- | 0.0669 | -- | -1.09 | 7.86 | -- | -- | -- | -- |
| 265.17 | 0.763 | 6.78 | 0.18 | 0.451 | -- | -- | -- | -1.09 | 7.8 | -- | -- | -- | -- |
| 239.01 | 0.72 | 6.83 | 0.36 | -- | 1.56 | -- | -- | -1.25 | -- | 68.45 | 7155 | -- | -- |
| 229.4 | 0.705 | 6.81 | -- | 0.598 | 1.55 | -- | -- | -1.22 | 7.41 | 69 | 6301 | -- | -- |
| 276.16 | 0.777 | 6.79 | 0.185 | -- | -- | -- | -- | -1.08 | -- | -- | -- | -- | -- |
| 266.02 | 0.763 | 6.78 | -- | 0.452 | -- | -- | -- | -1.11 | 7.78 | -- | -- | -- | -- |
| 242.34 | 0.725 | 6.84 | -- | -- | 1.49 | -- | -- | -1.28 | -- | 68.33 | 7146 | -- | -- |
| 277.07 | 0.777 | 6.8 | -- | -- | -- | -- | -- | -1.11 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 213.35 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 4 | 4 |
| 2 | 214.20 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 4 | 2 |
| 4 | 214.22 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 4 | 4 |
| 6 | 214.26 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 4 | 4 |
| 7 | 214.26 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 4 | 4 |
| 8 | 214.90 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 4 | 2 |
| 9 | 214.90 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 4 | 2 |
| 14 | 215.52 | humidity | 70.0 | 4320 | < th | dose independent | rect. | 11 | 1 |
| 16 | 215.88 | humidity | 80.0 | 4320 | < th | dose independent | rect. | 9 | 1 |
| 21 | 217.19 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 1 | 1 |
| 25 | 217.79 | humidity | 70.0 | 4320 | > th | dose independent | rect. | 11 | 1 |
| 26 | 217.81 | humidity | 80.0 | 4320 | > th | dose independent | rect. | 9 | 1 |
| 43 | 219.56 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 5 | 1 |
| 45 | 219.64 | humidity | 80.0 | 4320 | < th | dose dependent | rect. | 11 | 1 |
| 52 | 220.27 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 4 | 10 |
| 57 | 220.57 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 4 | 12 |
| 65 | 220.97 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 4 | 13 |
| 66 | 220.97 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 4 | 13 |
| 67 | 221.00 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 4 | 13 |
| 80 | 221.43 | humidity | 60.0 | 14400 | < th | dose dependent | rect. | 13 | 2 |
| 82 | 221.46 | humidity | 70.0 | 4320 | < th | dose independent | rect. | 6 | 7 |
| 127 | 222.30 | wind | 9.0 | 14400 | < th | dose dependent | rect. | 1 | 1 |
| 130 | 222.39 | humidity | 70.0 | 4320 | > th | dose independent | rect. | 23 | 14 |
| 131 | 222.40 | humidity | 70.0 | 4320 | > th | dose independent | rect. | 3 | 10 |
| 136 | 222.41 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 17 | 1 |
| 159 | 223.02 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 23 | 8 |
| 174 | 223.15 | humidity | 70.0 | 4320 | < th | dose independent | sin | 5 | NA |
| 182 | 223.31 | humidity | 70.0 | 4320 | > th | dose dependent | rect. | 10 | 1 |
| 207 | 223.51 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 17 | 1 |
| 208 | 223.52 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 1 | 6 |
| 215 | 223.63 | humidity | 80.0 | 4320 | < th | dose dependent | rect. | 21 | 16 |
| 218 | 223.71 | humidity | 50.0 | 4320 | > th | dose dependent | rect. | 10 | 2 |
| 274 | 224.00 | humidity | 60.0 | 14400 | < th | dose dependent | rect. | 12 | 21 |
| 308 | 224.41 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 7 | 1 |
| 309 | 224.41 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 7 | 1 |
| 311 | 224.45 | humidity | 90.0 | 4320 | > th | dose dependent | rect. | 8 | 1 |
| 321 | 224.56 | humidity | 70.0 | 4320 | > th | dose independent | sin | 5 | NA |
| 326 | 224.58 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 15 | 1 |
| 327 | 224.58 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 15 | 1 |
| 329 | 224.59 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 15 | 1 |
| 332 | 224.59 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 15 | 1 |
| 340 | 224.65 | wind | 3.0 | 14400 | < th | dose independent | rect. | 24 | 2 |
| 387 | 224.87 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 23 | 4 |
| 404 | 224.92 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 17 | 1 |
| 406 | 224.92 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 17 | 1 |
| 463 | 225.16 | precipitation | 0.1 | 14400 | < th | dose independent | sin | 3 | NA |
| 464 | 225.16 | precipitation | 0.1 | 14400 | < th | dose dependent | sin | 3 | NA |
| 466 | 225.18 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 7 | 1 |
| 469 | 225.18 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 7 | 1 |
| 472 | 225.20 | precipitation | 0.1 | 14400 | > th | dose independent | sin | 3 | NA |
| 474 | 225.20 | humidity | 80.0 | 14400 | < th | dose dependent | rect. | 7 | 5 |
| 500 | 225.27 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 23 | 7 |
| 558 | 225.36 | humidity | 90.0 | 4320 | > th | dose dependent | rect. | 7 | 3 |
| 560 | 225.36 | humidity | 80.0 | 4320 | < th | dose dependent | rect. | 5 | 8 |
| 563 | 225.37 | humidity | 60.0 | 14400 | < th | dose dependent | sin | 19 | NA |
| 566 | 225.38 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 23 | 4 |
| 623 | 225.60 | humidity | 50.0 | 4320 | > th | dose dependent | rect. | 5 | 8 |
| 677 | 225.78 | wind | 3.0 | 14400 | > th | dose independent | rect. | 24 | 2 |
| 799 | 226.01 | humidity | 80.0 | 4320 | < th | dose dependent | sin | 6 | NA |
| 807 | 226.03 | wind | 1.0 | 14400 | > th | dose independent | rect. | 4 | 4 |
| 923 | 226.28 | wind | 1.0 | 14400 | > th | dose independent | rect. | 2 | 6 |
| 958 | 226.31 | humidity | 60.0 | 14400 | < th | dose dependent | no | NA | NA |