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Os01g0751400

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 12.6 (0.0311) R2 : 0.762
β1 : -- (--) R2dD : -- R2D : --
β2 : 2.37 (0.0856) R2dC : 0.479 R2C : 0.586
β3 : 1.05 (0.106) R2dE : 0.0625 R2E : 0.126
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.915 (0.066) R2dN8 : 0.133 R2N8 : 0.085
σ : 0.584
deviance : 156.98
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C
peak time of C : 20.5
E
wheather : radiation
threshold : 40
memory length : 594
response mode : > th
dose dependency : dose dependent
G
type of G : no
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
148.87 0.573 12.6 0.248 2.36 0.947 0.155 2.53 -0.857 20.4 41.18 598 -- --
156.7 0.583 12.6 0.151 2.4 0.973 0.395 -- -0.87 20.4 40.02 594 -- --
148.92 0.568 12.6 0.253 2.36 0.963 -- 2.56 -0.859 20.5 40.92 595 -- --
156.85 0.583 12.6 0.108 2.39 1.06 -- -- -0.901 20.5 39.99 594 -- --
277.9 0.776 12.5 0.0112 -- 2.92 -- 2.29 -1.13 -- -4.706 879 -- --
178.09 0.626 12.6 0.168 2.78 -- 0.872 -- -0.805 19.9 -- -- -- --
180.31 0.629 12.6 0.144 2.78 -- -- -- -0.804 19.9 -- -- -- --
285.67 0.787 12.6 -0.0978 -- 2.96 -- -- -1.17 -- -4.663 871 -- --
156.98 0.584 12.6 -- 2.37 1.05 -- -- -0.915 20.5 40 594 -- --
601.64 1.15 12.5 0.114 -- -- -- -- -0.841 -- -- -- -- --
180.86 0.629 12.6 -- 2.78 -- -- -- -0.82 19.9 -- -- -- --
285.92 0.788 12.6 -- -- 2.95 -- -- -1.16 -- -3.426 871 -- --
601.99 1.15 12.5 -- -- -- -- -- -0.854 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 143.99 humidity 80 14400 < th dose independent rect. 9 1
2 145.38 humidity 80 14400 > th dose independent rect. 9 1
3 145.42 humidity 70 14400 > th dose independent rect. 11 1
4 145.77 wind 5 43200 < th dose dependent rect. 5 2
5 145.82 wind 3 43200 > th dose independent rect. 2 5
6 145.82 wind 3 43200 > th dose independent rect. 1 7
8 145.85 wind 3 43200 < th dose independent rect. 2 6
13 146.13 temperature 10 270 > th dose dependent rect. 13 15
28 146.43 radiation 1 270 < th dose independent rect. 16 8
31 146.51 humidity 70 270 > th dose independent rect. 15 9
36 146.59 humidity 50 270 > th dose dependent rect. 16 8
41 146.65 wind 1 43200 > th dose dependent rect. 5 2
44 146.67 wind 3 43200 < th dose independent rect. 22 10
55 146.89 humidity 80 14400 < th dose independent rect. 8 3
56 146.89 radiation 1 270 < th dose dependent rect. 16 8
58 146.91 wind 5 43200 < th dose dependent rect. 1 6
59 146.92 wind 3 43200 > th dose independent rect. 22 10
61 146.93 humidity 70 14400 < th dose independent rect. 11 1
63 146.97 wind 3 43200 > th dose independent rect. 2 2
74 147.12 temperature 20 10 > th dose dependent rect. 16 14
80 147.17 wind 3 43200 < th dose independent rect. 2 2
89 147.27 humidity 50 270 > th dose independent rect. 4 20
145 147.80 humidity 70 270 > th dose independent rect. 12 12
157 147.88 humidity 70 14400 > th dose independent rect. 10 5
162 147.91 temperature 30 270 < th dose independent rect. 17 7
170 147.95 radiation 30 1440 > th dose dependent rect. 13 2
173 147.98 wind 1 43200 > th dose dependent rect. 1 6
174 147.99 humidity 70 14400 < th dose independent rect. 11 8
194 148.14 humidity 70 14400 < th dose independent rect. 11 21
203 148.20 radiation 40 720 < th dose independent rect. 13 2
221 148.28 wind 9 43200 < th dose independent rect. 12 1
222 148.28 humidity 70 14400 < th dose independent rect. 11 11
236 148.31 wind 1 270 > th dose independent rect. 24 19
242 148.35 radiation 1 270 < th dose independent rect. 6 18
263 148.48 humidity 70 14400 > th dose independent rect. 10 9
266 148.52 humidity 70 14400 > th dose independent rect. 10 22
304 148.59 humidity 70 14400 > th dose independent rect. 10 15
309 148.60 humidity 70 14400 > th dose independent rect. 10 13
354 148.73 radiation 10 14400 < th dose dependent rect. 22 3
362 148.76 radiation 40 1440 < th dose independent rect. 13 12
367 148.77 radiation 40 1440 > th dose independent rect. 13 2
370 148.79 radiation 40 1440 < th dose independent rect. 13 14
391 148.83 radiation 40 1440 < th dose independent rect. 13 17
394 148.84 radiation 40 1440 > th dose independent rect. 13 20
401 148.86 humidity 90 14400 > th dose dependent rect. 6 11
404 148.87 radiation 40 1440 < th dose independent rect. 13 20
418 148.91 humidity 50 270 > th dose dependent rect. 11 13
440 148.99 humidity 70 14400 < th dose independent sin 18 NA
454 149.04 wind 3 43200 < th dose independent sin 8 NA
479 149.10 wind 3 43200 > th dose independent sin 7 NA
480 149.10 humidity 70 14400 < th dose independent rect. 14 5
483 149.10 radiation 30 720 > th dose dependent rect. 13 21
519 149.13 radiation 1 270 < th dose dependent rect. 5 19
541 149.21 humidity 70 14400 < th dose independent rect. 14 18
560 149.25 humidity 60 14400 > th dose dependent rect. 9 6
569 149.27 radiation 40 720 < th dose independent rect. 3 21
575 149.28 humidity 60 14400 > th dose dependent rect. 9 4
586 149.31 humidity 70 14400 > th dose independent sin 21 NA
587 149.31 temperature 30 270 < th dose independent rect. 4 20
617 149.37 radiation 40 720 > th dose dependent rect. 13 23
620 149.38 humidity 70 14400 > th dose dependent rect. 10 1
628 149.42 humidity 70 14400 < th dose independent rect. 14 8
648 149.44 humidity 70 14400 < th dose independent rect. 6 13
670 149.46 humidity 70 14400 < th dose independent rect. 18 1
691 149.53 temperature 30 90 < th dose dependent rect. 17 8
693 149.54 wind 9 14400 < th dose independent rect. 10 1
707 149.58 humidity 70 14400 > th dose independent rect. 21 22
712 149.59 humidity 70 14400 > th dose independent rect. 6 13
714 149.59 humidity 70 14400 > th dose independent rect. 24 19
727 149.61 wind 1 43200 < th dose dependent rect. 24 13
795 149.72 humidity 70 14400 > th dose independent rect. 18 23
807 149.73 humidity 90 14400 > th dose dependent rect. 15 2
809 149.73 humidity 60 14400 > th dose dependent rect. 6 11
828 149.75 humidity 70 14400 < th dose independent no NA NA
886 149.75 humidity 70 14400 < th dose independent rect. 17 23
923 149.77 humidity 70 14400 > th dose independent rect. 6 19
939 149.78 humidity 70 14400 > th dose independent no NA NA