Os01g0751300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os01g0751300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 19.3 | 0.206 | 9.56 | 0.519 | 0.639 | 0.846 | -0.377 | -0.831 | 0.00934 | 8.75 | 29.13 | 104 | -- | -- |
| 19.92 | 0.208 | 9.59 | 0.346 | 0.638 | 0.85 | -0.342 | -- | -0.0428 | 8.24 | 25.49 | 157 | -- | -- |
| 19.74 | 0.207 | 9.57 | 0.485 | 0.637 | 0.848 | -- | -0.686 | 0.00537 | 8.69 | 28.45 | 110 | -- | -- |
| 20.05 | 0.209 | 9.58 | 0.362 | 0.658 | 0.848 | -- | -- | -0.0332 | 7.99 | 25.07 | 189 | -- | -- |
| 29.69 | 0.254 | 9.56 | 0.75 | -- | 1.32 | -- | -1.77 | 0.0741 | -- | 37.29 | 519 | -- | -- |
| 30.13 | 0.257 | 9.62 | 0.158 | 0.709 | -- | -0.315 | -- | -0.204 | 7.27 | -- | -- | -- | -- |
| 30.4 | 0.258 | 9.62 | 0.151 | 0.708 | -- | -- | -- | -0.203 | 7.27 | -- | -- | -- | -- |
| 31.96 | 0.263 | 9.6 | 0.45 | -- | 1.28 | -- | -- | -0.00687 | -- | 35.5 | 518 | -- | -- |
| 23.19 | 0.224 | 9.6 | -- | 0.67 | 0.697 | -- | -- | -0.1 | 7.83 | 25.07 | 181 | -- | -- |
| 57 | 0.353 | 9.64 | 0.164 | -- | -- | -- | -- | -0.191 | -- | -- | -- | -- | -- |
| 31 | 0.26 | 9.62 | -- | 0.71 | -- | -- | -- | -0.22 | 7.26 | -- | -- | -- | -- |
| 36.85 | 0.283 | 9.61 | -- | -- | 1.12 | -- | -- | -0.0758 | -- | 48.15 | 499 | -- | -- |
| 57.71 | 0.355 | 9.64 | -- | -- | -- | -- | -- | -0.209 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 18.61 | temperature | 10 | 270 | > th | dose dependent | rect. | 5 | 23 |
| 2 | 18.79 | temperature | 30 | 90 | < th | dose dependent | rect. | 15 | 22 |
| 4 | 18.91 | temperature | 30 | 10 | < th | dose dependent | rect. | 14 | 22 |
| 5 | 18.91 | temperature | 30 | 30 | < th | dose dependent | rect. | 3 | 23 |
| 20 | 19.14 | temperature | 30 | 270 | < th | dose dependent | rect. | 11 | 22 |
| 31 | 19.24 | temperature | 25 | 270 | < th | dose dependent | rect. | 24 | 23 |
| 50 | 19.33 | temperature | 30 | 90 | < th | dose dependent | no | NA | NA |
| 67 | 19.45 | temperature | 10 | 90 | > th | dose dependent | no | NA | NA |
| 90 | 19.53 | temperature | 10 | 720 | > th | dose dependent | rect. | 13 | 22 |
| 99 | 19.56 | temperature | 15 | 270 | > th | dose dependent | rect. | 16 | 23 |
| 104 | 19.58 | temperature | 15 | 720 | > th | dose dependent | rect. | 14 | 14 |
| 125 | 19.63 | temperature | 15 | 720 | > th | dose dependent | rect. | 14 | 19 |
| 144 | 19.66 | temperature | 15 | 270 | > th | dose dependent | rect. | 19 | 23 |
| 169 | 19.71 | temperature | 25 | 720 | < th | dose dependent | rect. | 7 | 19 |
| 198 | 19.76 | temperature | 15 | 90 | > th | dose dependent | rect. | 8 | 23 |
| 322 | 19.98 | temperature | 15 | 720 | > th | dose dependent | rect. | 10 | 23 |
| 323 | 19.99 | temperature | 15 | 720 | > th | dose dependent | sin | 15 | NA |
| 424 | 20.11 | temperature | 10 | 720 | > th | dose dependent | rect. | 23 | 23 |
| 489 | 20.20 | temperature | 15 | 270 | > th | dose dependent | sin | 10 | NA |
| 504 | 20.21 | temperature | 15 | 90 | > th | dose dependent | rect. | 23 | 23 |
| 675 | 20.45 | temperature | 25 | 720 | < th | dose dependent | sin | 21 | NA |
| 724 | 20.50 | temperature | 15 | 10 | > th | dose dependent | rect. | 23 | 23 |
| 846 | 20.65 | temperature | 15 | 10 | > th | dose dependent | rect. | 8 | 23 |