Os01g0750900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os01g0750900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 83.22 | 0.429 | 9.81 | -0.732 | 1.78 | -1.68 | 0.698 | -4.21 | 0.399 | 10.2 | 0.1882 | 1427 | -- | -- |
| 88.48 | 0.438 | 9.88 | -1.02 | 1.84 | -0.644 | 0.505 | -- | 0.366 | 10.2 | 1.503 | 1388 | -- | -- |
| 85.03 | 0.429 | 9.81 | -0.705 | 1.74 | -1.66 | -- | -4.17 | 0.398 | 10.2 | 0.1802 | 1435 | -- | -- |
| 89.42 | 0.44 | 9.88 | -1.01 | 1.81 | -0.602 | -- | -- | 0.343 | 10.2 | 1.853 | 1388 | -- | -- |
| 146.47 | 0.567 | 9.92 | -0.972 | -- | -1.07 | -- | 0.0321 | 0.387 | -- | 0.2576 | 1585 | -- | -- |
| 92.98 | 0.452 | 9.87 | -0.918 | 1.71 | -- | 0.485 | -- | 0.412 | 10.1 | -- | -- | -- | -- |
| 93.91 | 0.454 | 9.87 | -0.899 | 1.71 | -- | -- | -- | 0.414 | 10.2 | -- | -- | -- | -- |
| 140.32 | 0.554 | 9.93 | -0.933 | -- | -1.1 | -- | -- | 0.379 | -- | 2.73 | 1629 | -- | -- |
| 112.52 | 0.494 | 9.87 | -- | 1.76 | -0.325 | -- | -- | 0.437 | 10.2 | 10.04 | 2878 | -- | -- |
| 270.76 | 0.769 | 9.92 | -0.923 | -- | -- | -- | -- | 0.411 | -- | -- | -- | -- | -- |
| 115.22 | 0.502 | 9.85 | -- | 1.71 | -- | -- | -- | 0.514 | 10.2 | -- | -- | -- | -- |
| 155.2 | 0.582 | 9.9 | -- | -- | -1.2 | -- | -- | 0.506 | -- | 10.04 | 2878 | -- | -- |
| 293.22 | 0.799 | 9.89 | -- | -- | -- | -- | -- | 0.513 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 81.83 | humidity | 90.0 | 720 | < th | dose independent | rect. | 19 | 4 |
| 6 | 82.44 | wind | 9.0 | 4320 | > th | dose dependent | rect. | 18 | 2 |
| 7 | 82.45 | radiation | 1.0 | 90 | > th | dose independent | rect. | 17 | 22 |
| 11 | 82.71 | radiation | 1.0 | 90 | > th | dose independent | rect. | 4 | 11 |
| 24 | 82.77 | temperature | 15.0 | 14400 | > th | dose independent | rect. | 9 | 6 |
| 29 | 82.92 | temperature | 15.0 | 14400 | < th | dose independent | rect. | 21 | 4 |
| 30 | 82.93 | temperature | 15.0 | 14400 | > th | dose independent | rect. | 21 | 1 |
| 36 | 83.09 | temperature | 15.0 | 14400 | < th | dose independent | rect. | 9 | 5 |
| 39 | 83.12 | temperature | 15.0 | 14400 | < th | dose independent | rect. | 9 | 2 |
| 42 | 83.15 | temperature | 15.0 | 14400 | > th | dose independent | rect. | 9 | 2 |
| 44 | 83.17 | wind | 9.0 | 4320 | > th | dose independent | rect. | 18 | 1 |
| 45 | 83.19 | temperature | 15.0 | 14400 | > th | dose independent | rect. | 21 | 3 |
| 47 | 83.21 | temperature | 15.0 | 14400 | < th | dose independent | rect. | 24 | 1 |
| 52 | 83.28 | temperature | 15.0 | 14400 | < th | dose independent | rect. | 5 | 8 |
| 58 | 83.33 | temperature | 15.0 | 14400 | < th | dose dependent | rect. | 4 | 5 |
| 68 | 83.41 | temperature | 15.0 | 14400 | < th | dose dependent | rect. | 3 | 14 |
| 69 | 83.42 | wind | 9.0 | 4320 | < th | dose independent | rect. | 18 | 1 |
| 78 | 83.45 | temperature | 15.0 | 14400 | < th | dose dependent | rect. | 2 | 17 |
| 102 | 83.53 | humidity | 90.0 | 720 | < th | dose dependent | rect. | 19 | 4 |
| 126 | 83.60 | temperature | 15.0 | 14400 | < th | dose dependent | sin | 2 | NA |
| 143 | 83.66 | temperature | 15.0 | 14400 | < th | dose independent | rect. | 9 | 18 |
| 144 | 83.66 | temperature | 15.0 | 14400 | < th | dose dependent | rect. | 4 | 1 |
| 169 | 83.73 | precipitation | 0.1 | 270 | > th | dose independent | rect. | 1 | 3 |
| 173 | 83.73 | temperature | 15.0 | 14400 | < th | dose dependent | rect. | 12 | 22 |
| 183 | 83.76 | temperature | 15.0 | 14400 | < th | dose dependent | no | NA | NA |
| 194 | 83.77 | wind | 5.0 | 4320 | > th | dose dependent | rect. | 17 | 2 |
| 197 | 83.77 | temperature | 15.0 | 14400 | < th | dose dependent | rect. | 6 | 23 |
| 203 | 83.78 | humidity | 90.0 | 720 | > th | dose dependent | rect. | 19 | 6 |
| 254 | 83.82 | temperature | 15.0 | 14400 | > th | dose independent | rect. | 9 | 16 |
| 268 | 83.83 | precipitation | 0.1 | 270 | > th | dose dependent | rect. | 1 | 3 |
| 291 | 83.86 | wind | 5.0 | 4320 | > th | dose dependent | rect. | 17 | 4 |
| 315 | 83.89 | temperature | 15.0 | 14400 | < th | dose dependent | sin | 16 | NA |
| 323 | 83.90 | radiation | 10.0 | 90 | < th | dose independent | rect. | 6 | 18 |
| 462 | 84.08 | humidity | 90.0 | 720 | > th | dose dependent | rect. | 20 | 3 |
| 472 | 84.09 | temperature | 15.0 | 14400 | < th | dose dependent | rect. | 17 | 8 |
| 479 | 84.10 | temperature | 15.0 | 14400 | < th | dose dependent | rect. | 19 | 5 |
| 486 | 84.11 | wind | 7.0 | 4320 | < th | dose independent | rect. | 17 | 4 |
| 519 | 84.16 | wind | 1.0 | 30 | > th | dose independent | rect. | 1 | 5 |
| 548 | 84.20 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 7 | 1 |
| 563 | 84.21 | radiation | 1.0 | 14400 | < th | dose dependent | rect. | 9 | 1 |
| 566 | 84.22 | atmosphere | 1010.0 | 270 | < th | dose dependent | rect. | 22 | 8 |
| 573 | 84.24 | humidity | 50.0 | 43200 | < th | dose dependent | rect. | 17 | 19 |
| 585 | 84.28 | humidity | 90.0 | 720 | > th | dose independent | rect. | 20 | 3 |
| 596 | 84.31 | radiation | 1.0 | 90 | < th | dose independent | rect. | 24 | 17 |
| 597 | 84.31 | humidity | 50.0 | 43200 | < th | dose dependent | sin | 10 | NA |
| 616 | 84.35 | humidity | 50.0 | 43200 | < th | dose dependent | rect. | 18 | 17 |
| 617 | 84.36 | temperature | 15.0 | 14400 | < th | dose independent | sin | 0 | NA |
| 619 | 84.36 | humidity | 90.0 | 720 | > th | dose dependent | rect. | 20 | 1 |
| 624 | 84.38 | humidity | 50.0 | 43200 | < th | dose dependent | rect. | 9 | 2 |
| 634 | 84.41 | temperature | 15.0 | 14400 | > th | dose independent | rect. | 24 | 1 |
| 640 | 84.42 | radiation | 40.0 | 270 | < th | dose independent | rect. | 10 | 13 |
| 646 | 84.43 | precipitation | 0.1 | 270 | > th | dose independent | rect. | 20 | 8 |
| 648 | 84.43 | radiation | 40.0 | 270 | < th | dose dependent | rect. | 10 | 13 |
| 654 | 84.44 | humidity | 50.0 | 43200 | < th | dose dependent | rect. | 4 | 7 |
| 668 | 84.45 | atmosphere | 1010.0 | 10 | < th | dose dependent | rect. | 24 | 6 |
| 669 | 84.45 | radiation | 40.0 | 4320 | < th | dose dependent | rect. | 18 | 7 |
| 671 | 84.45 | atmosphere | 1010.0 | 10 | < th | dose dependent | rect. | 24 | 8 |
| 672 | 84.45 | atmosphere | 1010.0 | 90 | < th | dose dependent | rect. | 23 | 10 |
| 673 | 84.46 | temperature | 15.0 | 14400 | > th | dose independent | rect. | 12 | 1 |
| 705 | 84.49 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 20 | 5 |
| 714 | 84.50 | radiation | 1.0 | 90 | < th | dose independent | sin | 5 | NA |
| 718 | 84.51 | temperature | 25.0 | 720 | > th | dose dependent | rect. | 21 | 1 |
| 737 | 84.55 | radiation | 10.0 | 270 | < th | dose independent | rect. | 9 | 14 |
| 744 | 84.56 | radiation | 40.0 | 14400 | < th | dose independent | rect. | 16 | 3 |
| 745 | 84.56 | radiation | 1.0 | 90 | < th | dose independent | rect. | 24 | 10 |
| 751 | 84.57 | humidity | 50.0 | 720 | > th | dose dependent | rect. | 18 | 8 |
| 757 | 84.59 | wind | 7.0 | 4320 | > th | dose independent | rect. | 17 | 4 |
| 770 | 84.61 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 20 | 10 |
| 784 | 84.63 | radiation | 20.0 | 90 | < th | dose dependent | rect. | 10 | 14 |
| 817 | 84.71 | humidity | 80.0 | 43200 | > th | dose independent | rect. | 13 | 1 |
| 818 | 84.71 | temperature | 15.0 | 43200 | > th | dose independent | rect. | 4 | 9 |
| 826 | 84.73 | radiation | 1.0 | 90 | > th | dose independent | sin | 4 | NA |
| 839 | 84.74 | temperature | 15.0 | 14400 | < th | dose dependent | rect. | 23 | 1 |
| 865 | 84.80 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 20 | 12 |
| 892 | 84.84 | wind | 9.0 | 90 | < th | dose independent | rect. | 24 | 17 |
| 897 | 84.85 | humidity | 90.0 | 43200 | > th | dose independent | rect. | 4 | 2 |
| 934 | 84.90 | radiation | 40.0 | 4320 | < th | dose dependent | rect. | 18 | 3 |
| 948 | 84.91 | temperature | 15.0 | 14400 | < th | dose dependent | rect. | 10 | 1 |
| 954 | 84.91 | humidity | 80.0 | 43200 | > th | dose dependent | rect. | 12 | 18 |
| 964 | 84.92 | radiation | 1.0 | 90 | < th | dose dependent | rect. | 24 | 17 |
| 982 | 84.94 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 19 | 4 |