Os01g0750600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Pistil-specific extensin-like protein family protein.
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Os01g0750600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Pistil-specific extensin-like protein family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = rect.)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 79.55 | 0.419 | 8.65 | 0.214 | 0.909 | -1.91 | 1.64 | 1.78 | 0.235 | 19 | 21.08 | 15 | 19.9 | 19 |
| 82.17 | 0.422 | 8.67 | 0.0367 | 0.952 | -1.88 | 1.43 | -- | 0.2 | 18.8 | 21.59 | 16 | 19.9 | 19 |
| 86.07 | 0.432 | 8.66 | 0.113 | 0.954 | -1.88 | -- | 1.29 | 0.192 | 19 | 21.43 | 14 | 19.9 | 19 |
| 86.97 | 0.434 | 8.65 | 0.0366 | 0.952 | -1.82 | -- | -- | 0.206 | 19.1 | 21.32 | 12 | 19.9 | 19 |
| 105.55 | 0.479 | 8.66 | -0.135 | -- | -2.14 | -- | -0.513 | 0.107 | -- | 13.26 | 13 | 20.5 | 18.4 |
| 133.56 | 0.542 | 8.74 | -0.23 | 1.39 | -- | 1.29 | -- | -0.0896 | 20.2 | -- | -- | -- | -- |
| 138.56 | 0.551 | 8.74 | -0.269 | 1.38 | -- | -- | -- | -0.0896 | 20.2 | -- | -- | -- | -- |
| 104.97 | 0.477 | 8.65 | 0.004 | -- | -2.21 | -- | -- | 0.127 | -- | 13.83 | 23 | 20.8 | 18 |
| 86.75 | 0.434 | 8.67 | -- | 0.914 | -1.84 | -- | -- | 0.183 | 19 | 21.11 | 11 | 20 | 19 |
| 244.24 | 0.73 | 8.71 | -0.279 | -- | -- | -- | -- | -0.105 | -- | -- | -- | -- | -- |
| 140.47 | 0.554 | 8.74 | -- | 1.38 | -- | -- | -- | -0.0597 | 20.2 | -- | -- | -- | -- |
| 104.73 | 0.477 | 8.65 | -- | -- | -2.21 | -- | -- | 0.128 | -- | 13.67 | 19 | 20.8 | 18 |
| 246.29 | 0.733 | 8.7 | -- | -- | -- | -- | -- | -0.0742 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 83.72 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 20 | 19 |
| 2 | 83.89 | temperature | 20.0 | 90 | > th | dose dependent | rect. | 19 | 19 |
| 8 | 86.41 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 17 | 20 |
| 33 | 89.76 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 5 | 9 |
| 42 | 90.65 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 4 | 9 |
| 50 | 91.04 | temperature | 25.0 | 90 | > th | dose independent | rect. | 18 | 21 |
| 65 | 91.90 | temperature | 25.0 | 90 | > th | dose independent | rect. | 19 | 19 |
| 100 | 93.24 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 9 | 5 |
| 101 | 93.25 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 7 | 7 |
| 183 | 95.64 | temperature | 20.0 | 10 | > th | dose dependent | sin | 4 | NA |
| 185 | 95.66 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 1 | 17 |
| 238 | 96.63 | radiation | 1.0 | 270 | > th | dose independent | rect. | 17 | 21 |
| 240 | 96.65 | temperature | 10.0 | 90 | > th | dose dependent | rect. | 9 | 15 |
| 242 | 96.70 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 9 | 16 |
| 271 | 97.37 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 7 | 16 |
| 272 | 97.38 | temperature | 20.0 | 270 | > th | dose independent | rect. | 5 | 8 |
| 328 | 98.19 | radiation | 10.0 | 43200 | < th | dose dependent | rect. | 19 | 8 |
| 334 | 98.24 | temperature | 25.0 | 90 | > th | dose independent | rect. | 9 | 5 |
| 393 | 99.04 | temperature | 25.0 | 270 | > th | dose dependent | sin | 9 | NA |
| 406 | 99.20 | radiation | 10.0 | 43200 | < th | dose dependent | rect. | 21 | 6 |
| 461 | 99.86 | temperature | 30.0 | 10 | < th | dose dependent | sin | 4 | NA |
| 488 | 100.13 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 17 | 20 |
| 489 | 100.13 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 17 | 20 |
| 570 | 100.93 | wind | 7.0 | 270 | < th | dose independent | rect. | 17 | 20 |
| 604 | 101.28 | radiation | 1.0 | 270 | > th | dose independent | rect. | 5 | 8 |
| 818 | 103.03 | temperature | 15.0 | 270 | > th | dose independent | rect. | 17 | 20 |
| 851 | 103.30 | temperature | 25.0 | 90 | > th | dose independent | rect. | 6 | 20 |
| 856 | 103.37 | temperature | 25.0 | 90 | > th | dose independent | rect. | 8 | 17 |
| 876 | 103.49 | temperature | 25.0 | 90 | > th | dose independent | rect. | 9 | 15 |
| 878 | 103.50 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 1 | 10 |
| 896 | 103.63 | wind | 9.0 | 270 | < th | dose dependent | rect. | 6 | 7 |
| 934 | 103.92 | wind | 7.0 | 270 | < th | dose independent | rect. | 7 | 16 |
| 942 | 103.95 | wind | 9.0 | 270 | < th | dose dependent | rect. | 18 | 18 |
| 958 | 104.02 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 8 | 14 |
| 962 | 104.02 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 8 | 14 |
| 998 | 104.26 | wind | 1.0 | 270 | > th | dose independent | rect. | 13 | 4 |