Os01g0749400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : HAD-superfamily hydrolase subfamily IIB protein.
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Os01g0749400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : HAD-superfamily hydrolase subfamily IIB protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 94.29 | 0.456 | 11 | 0.712 | 0.192 | -1.29 | 0.499 | 5.52 | 0.076 | 21.3 | 25.12 | 1516 | -- | -- |
| 99.58 | 0.465 | 11.2 | -0.242 | 0.0735 | -1.11 | 1.16 | -- | -0.000963 | 20.6 | 18.01 | 11650 | -- | -- |
| 94.89 | 0.454 | 11 | 0.746 | 0.202 | -1.29 | -- | 5.59 | 0.0671 | 23.1 | 25.44 | 1460 | -- | -- |
| 98.17 | 0.461 | 11.1 | -0.275 | 0.216 | -1.27 | -- | -- | 0.0636 | 23.8 | 16.95 | 11242 | -- | -- |
| 97.28 | 0.459 | 11 | 0.701 | -- | -1.29 | -- | 5.57 | 0.0724 | -- | 25.2 | 1513 | -- | -- |
| 128.3 | 0.531 | 11.2 | -1.07 | 0.132 | -- | 0.71 | -- | -0.399 | 20.2 | -- | -- | -- | -- |
| 129.18 | 0.532 | 11.2 | -1.1 | 0.161 | -- | -- | -- | -0.401 | 22.9 | -- | -- | -- | -- |
| 100.19 | 0.466 | 11.1 | -0.23 | -- | -1.28 | -- | -- | 0.0885 | -- | 16.2 | 11692 | -- | -- |
| 97.8 | 0.461 | 11.1 | -- | 0.218 | -1.44 | -- | -- | 0.155 | 0.253 | 12.42 | 16831 | -- | -- |
| 130.79 | 0.534 | 11.2 | -1.09 | -- | -- | -- | -- | -0.4 | -- | -- | -- | -- | -- |
| 160.94 | 0.593 | 11.2 | -- | 0.153 | -- | -- | -- | -0.279 | 22.4 | -- | -- | -- | -- |
| 99.57 | 0.465 | 11.1 | -- | -- | -1.43 | -- | -- | 0.2 | -- | 9.884 | 15976 | -- | -- |
| 162.37 | 0.595 | 11.2 | -- | -- | -- | -- | -- | -0.278 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 85.52 | humidity | 70.0 | 14400 | < th | dose independent | rect. | 18 | 14 |
| 2 | 86.06 | wind | 9.0 | 43200 | < th | dose dependent | rect. | 12 | 1 |
| 3 | 86.15 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 12 | 1 |
| 7 | 86.64 | humidity | 70.0 | 14400 | > th | dose independent | rect. | 19 | 13 |
| 11 | 86.96 | wind | 3.0 | 43200 | > th | dose independent | rect. | 11 | 2 |
| 12 | 87.14 | humidity | 70.0 | 14400 | < th | dose dependent | rect. | 17 | 15 |
| 13 | 87.20 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 11 | 3 |
| 16 | 87.29 | humidity | 70.0 | 14400 | < th | dose independent | rect. | 18 | 3 |
| 17 | 87.30 | humidity | 70.0 | 14400 | < th | dose dependent | rect. | 17 | 3 |
| 56 | 88.04 | wind | 3.0 | 43200 | < th | dose independent | rect. | 11 | 1 |
| 66 | 88.09 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 18 | 11 |
| 70 | 88.17 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 19 | 1 |
| 71 | 88.18 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 11 | 18 |
| 74 | 88.43 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 19 | 1 |
| 75 | 88.43 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 19 | 1 |
| 82 | 88.76 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 19 | 1 |
| 104 | 89.25 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 16 | 4 |
| 109 | 89.35 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 16 | 9 |
| 117 | 89.39 | wind | 3.0 | 43200 | > th | dose dependent | rect. | 10 | 6 |
| 118 | 89.40 | radiation | 20.0 | 4320 | < th | dose independent | rect. | 7 | 1 |
| 120 | 89.40 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 18 | 3 |
| 128 | 89.49 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 18 | 9 |
| 129 | 89.51 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 18 | 7 |
| 134 | 89.55 | wind | 3.0 | 43200 | > th | dose independent | rect. | 8 | 6 |
| 135 | 89.57 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 24 | 4 |
| 136 | 89.58 | humidity | 80.0 | 43200 | < th | dose dependent | rect. | 22 | 1 |
| 141 | 89.71 | humidity | 90.0 | 43200 | < th | dose independent | rect. | 20 | 2 |
| 143 | 89.74 | humidity | 90.0 | 43200 | > th | dose independent | rect. | 19 | 3 |
| 145 | 89.76 | wind | 3.0 | 43200 | < th | dose independent | rect. | 8 | 6 |
| 146 | 89.77 | wind | 3.0 | 43200 | > th | dose independent | rect. | 6 | 8 |
| 148 | 89.80 | wind | 3.0 | 43200 | < th | dose independent | rect. | 9 | 4 |
| 149 | 89.80 | wind | 5.0 | 43200 | > th | dose dependent | rect. | 15 | 1 |
| 152 | 89.85 | wind | 1.0 | 43200 | < th | dose independent | rect. | 23 | 3 |
| 156 | 89.93 | wind | 3.0 | 43200 | < th | dose independent | rect. | 6 | 8 |
| 177 | 90.14 | wind | 3.0 | 43200 | > th | dose independent | rect. | 9 | 4 |
| 178 | 90.15 | humidity | 80.0 | 43200 | < th | dose independent | rect. | 5 | 2 |
| 181 | 90.20 | radiation | 1.0 | 4320 | < th | dose independent | rect. | 18 | 3 |
| 214 | 90.34 | humidity | 70.0 | 14400 | < th | dose dependent | sin | 12 | NA |
| 226 | 90.36 | humidity | 80.0 | 43200 | > th | dose independent | rect. | 3 | 1 |
| 230 | 90.37 | radiation | 1.0 | 4320 | < th | dose independent | rect. | 18 | 9 |
| 234 | 90.38 | radiation | 1.0 | 4320 | > th | dose dependent | rect. | 18 | 1 |
| 275 | 90.48 | humidity | 80.0 | 43200 | > th | dose independent | rect. | 3 | 4 |
| 285 | 90.58 | wind | 9.0 | 43200 | < th | dose dependent | rect. | 5 | 11 |
| 286 | 90.59 | atmosphere | 1005.0 | 43200 | > th | dose independent | rect. | 16 | 1 |
| 291 | 90.62 | wind | 3.0 | 43200 | > th | dose dependent | rect. | 5 | 12 |
| 293 | 90.63 | wind | 5.0 | 43200 | < th | dose independent | rect. | 10 | 6 |
| 295 | 90.65 | wind | 3.0 | 43200 | < th | dose independent | rect. | 3 | 11 |
| 297 | 90.66 | wind | 9.0 | 43200 | < th | dose dependent | rect. | 3 | 13 |
| 302 | 90.70 | atmosphere | 1005.0 | 43200 | < th | dose independent | rect. | 18 | 1 |
| 303 | 90.70 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 3 | 13 |
| 312 | 90.75 | humidity | 80.0 | 43200 | < th | dose dependent | rect. | 22 | 10 |
| 313 | 90.76 | humidity | 70.0 | 14400 | > th | dose independent | rect. | 18 | 3 |
| 325 | 90.80 | atmosphere | 1005.0 | 43200 | < th | dose independent | rect. | 16 | 1 |
| 341 | 90.88 | atmosphere | 1005.0 | 43200 | > th | dose independent | rect. | 18 | 2 |
| 349 | 90.91 | wind | 1.0 | 43200 | > th | dose independent | rect. | 24 | 2 |
| 350 | 90.91 | atmosphere | 1005.0 | 43200 | > th | dose independent | rect. | 16 | 4 |
| 379 | 90.99 | humidity | 80.0 | 43200 | < th | dose independent | rect. | 3 | 1 |
| 380 | 90.99 | humidity | 80.0 | 43200 | < th | dose independent | rect. | 23 | 9 |
| 395 | 91.04 | atmosphere | 1005.0 | 43200 | < th | dose independent | rect. | 16 | 3 |
| 411 | 91.08 | radiation | 40.0 | 43200 | > th | dose dependent | rect. | 10 | 2 |
| 416 | 91.11 | humidity | 60.0 | 14400 | < th | dose independent | sin | 13 | NA |
| 434 | 91.15 | atmosphere | 1005.0 | 43200 | < th | dose independent | rect. | 11 | 8 |
| 448 | 91.20 | wind | 7.0 | 43200 | > th | dose independent | rect. | 15 | 1 |
| 450 | 91.20 | atmosphere | 1005.0 | 43200 | > th | dose independent | rect. | 11 | 9 |
| 451 | 91.20 | humidity | 90.0 | 43200 | < th | dose independent | rect. | 15 | 10 |
| 472 | 91.25 | atmosphere | 1005.0 | 43200 | < th | dose independent | rect. | 11 | 6 |
| 477 | 91.26 | humidity | 60.0 | 14400 | > th | dose independent | sin | 13 | NA |
| 488 | 91.28 | radiation | 10.0 | 14400 | > th | dose dependent | rect. | 17 | 13 |
| 496 | 91.32 | atmosphere | 1005.0 | 43200 | < th | dose independent | rect. | 15 | 8 |
| 506 | 91.33 | wind | 9.0 | 43200 | < th | dose dependent | rect. | 24 | 16 |
| 516 | 91.35 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 24 | 16 |
| 517 | 91.36 | radiation | 40.0 | 43200 | > th | dose independent | rect. | 10 | 1 |
| 524 | 91.36 | atmosphere | 1005.0 | 43200 | < th | dose independent | rect. | 11 | 12 |
| 547 | 91.40 | wind | 7.0 | 43200 | < th | dose independent | rect. | 15 | 1 |
| 591 | 91.48 | radiation | 1.0 | 14400 | > th | dose independent | rect. | 18 | 1 |
| 611 | 91.50 | humidity | 80.0 | 43200 | < th | dose independent | rect. | 23 | 1 |
| 623 | 91.51 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 5 | 2 |
| 627 | 91.52 | radiation | 40.0 | 43200 | < th | dose independent | rect. | 10 | 1 |
| 645 | 91.55 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 14 | 1 |
| 649 | 91.56 | atmosphere | 1005.0 | 43200 | < th | dose independent | rect. | 12 | 2 |
| 676 | 91.60 | wind | 9.0 | 43200 | < th | dose dependent | sin | 2 | NA |
| 684 | 91.61 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 8 | 21 |
| 688 | 91.63 | radiation | 20.0 | 43200 | < th | dose independent | rect. | 5 | 4 |
| 691 | 91.63 | radiation | 20.0 | 43200 | < th | dose independent | rect. | 21 | 12 |
| 692 | 91.63 | wind | 3.0 | 43200 | > th | dose dependent | sin | 0 | NA |
| 695 | 91.64 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 13 | 5 |
| 711 | 91.65 | atmosphere | 1005.0 | 43200 | < th | dose independent | sin | 18 | NA |
| 717 | 91.65 | radiation | 30.0 | 4320 | < th | dose dependent | rect. | 18 | 9 |
| 722 | 91.66 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 16 | 11 |
| 726 | 91.67 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 14 | 1 |
| 729 | 91.67 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 16 | 11 |
| 732 | 91.67 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 16 | 11 |
| 740 | 91.69 | atmosphere | 1005.0 | 43200 | < th | dose independent | rect. | 11 | 17 |
| 758 | 91.73 | radiation | 20.0 | 43200 | < th | dose independent | rect. | 8 | 1 |
| 759 | 91.73 | atmosphere | 1005.0 | 43200 | > th | dose independent | rect. | 11 | 3 |
| 773 | 91.75 | wind | 1.0 | 43200 | > th | dose dependent | sin | 2 | NA |
| 777 | 91.76 | humidity | 80.0 | 43200 | < th | dose dependent | rect. | 24 | 1 |
| 782 | 91.77 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 14 | 3 |
| 804 | 91.80 | atmosphere | 1005.0 | 43200 | < th | dose independent | rect. | 15 | 13 |
| 808 | 91.80 | radiation | 30.0 | 4320 | < th | dose dependent | rect. | 18 | 11 |
| 832 | 91.83 | radiation | 20.0 | 14400 | < th | dose independent | rect. | 16 | 15 |
| 837 | 91.84 | radiation | 30.0 | 4320 | < th | dose dependent | rect. | 18 | 7 |
| 839 | 91.85 | temperature | 25.0 | 4320 | > th | dose independent | rect. | 10 | 1 |
| 847 | 91.85 | radiation | 1.0 | 14400 | < th | dose dependent | rect. | 18 | 3 |
| 850 | 91.85 | radiation | 1.0 | 14400 | < th | dose dependent | rect. | 18 | 9 |
| 888 | 91.89 | atmosphere | 1005.0 | 43200 | > th | dose independent | rect. | 13 | 1 |
| 928 | 91.93 | humidity | 90.0 | 43200 | < th | dose independent | sin | 17 | NA |
| 929 | 91.93 | atmosphere | 1005.0 | 43200 | > th | dose independent | sin | 19 | NA |
| 937 | 91.94 | humidity | 90.0 | 43200 | > th | dose dependent | rect. | 21 | 1 |
| 963 | 91.99 | radiation | 40.0 | 4320 | < th | dose dependent | rect. | 18 | 3 |
| 973 | 92.01 | temperature | 25.0 | 4320 | < th | dose independent | rect. | 10 | 1 |
| 981 | 92.01 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 19 | 8 |
| 986 | 92.02 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 13 | 14 |
| 989 | 92.02 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 13 | 14 |
| 997 | 92.04 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 13 | 14 |