Os01g0747500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Dihydroorotase (EC 3.5.2.3).
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Os01g0747500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Dihydroorotase (EC 3.5.2.3).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 110.18 | 0.493 | 8.92 | 0.00298 | 1.88 | 1.09 | 1.17 | 2.35 | -0.326 | 21.8 | 68 | 4665 | -- | -- |
| 115.12 | 0.5 | 8.92 | -0.0559 | 1.91 | 1.08 | 1.22 | -- | -0.339 | 21.7 | 68 | 3087 | -- | -- |
| 115.24 | 0.5 | 8.92 | -0.0364 | 1.86 | 1.11 | -- | 2.33 | -0.33 | 21.8 | 67.95 | 4709 | -- | -- |
| 118.63 | 0.507 | 8.88 | -0.186 | 1.84 | 1.05 | -- | -- | -0.217 | 21.4 | 66.96 | 2715 | -- | -- |
| 198.98 | 0.657 | 8.93 | -0.0973 | -- | 2.07 | -- | 1.33 | -0.628 | -- | 79.01 | 831 | -- | -- |
| 144.59 | 0.564 | 8.92 | -0.0556 | 1.91 | -- | 1.28 | -- | -0.366 | 21.7 | -- | -- | -- | -- |
| 150.79 | 0.575 | 8.93 | -0.104 | 1.91 | -- | -- | -- | -0.368 | 21.7 | -- | -- | -- | -- |
| 198.06 | 0.655 | 8.89 | -0.252 | -- | 2.3 | -- | -- | -0.427 | -- | 78 | 849 | -- | -- |
| 119.53 | 0.509 | 8.89 | -- | 1.82 | 1.02 | -- | -- | -0.197 | 21.4 | 67 | 2711 | -- | -- |
| 366.09 | 0.894 | 8.87 | -0.0876 | -- | -- | -- | -- | -0.371 | -- | -- | -- | -- | -- |
| 151.07 | 0.575 | 8.92 | -- | 1.91 | -- | -- | -- | -0.356 | 21.6 | -- | -- | -- | -- |
| 199.64 | 0.658 | 8.88 | -- | -- | 2.29 | -- | -- | -0.398 | -- | 78.51 | 849 | -- | -- |
| 366.29 | 0.893 | 8.87 | -- | -- | -- | -- | -- | -0.362 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 105.47 | temperature | 20 | 270 | > th | dose independent | rect. | 3 | 9 |
| 4 | 107.99 | temperature | 20 | 270 | > th | dose independent | rect. | 19 | 17 |
| 6 | 108.37 | temperature | 20 | 270 | > th | dose independent | rect. | 21 | 15 |
| 8 | 108.65 | humidity | 60 | 14400 | < th | dose independent | rect. | 11 | 2 |
| 11 | 108.80 | wind | 3 | 14400 | < th | dose dependent | rect. | 4 | 1 |
| 13 | 108.90 | humidity | 60 | 14400 | > th | dose independent | rect. | 11 | 2 |
| 16 | 109.23 | wind | 1 | 14400 | < th | dose independent | rect. | 4 | 2 |
| 17 | 109.26 | wind | 1 | 14400 | > th | dose independent | rect. | 4 | 2 |
| 18 | 109.31 | wind | 9 | 43200 | < th | dose dependent | rect. | 5 | 1 |
| 20 | 109.38 | wind | 1 | 43200 | > th | dose dependent | rect. | 5 | 1 |
| 45 | 110.53 | wind | 9 | 43200 | < th | dose dependent | rect. | 4 | 3 |
| 50 | 110.71 | wind | 1 | 14400 | > th | dose independent | rect. | 2 | 5 |
| 55 | 110.91 | humidity | 70 | 14400 | < th | dose dependent | rect. | 12 | 1 |
| 56 | 110.91 | wind | 1 | 43200 | > th | dose dependent | rect. | 4 | 3 |
| 67 | 111.08 | humidity | 60 | 14400 | > th | dose independent | rect. | 23 | 15 |
| 87 | 111.24 | humidity | 60 | 1440 | > th | dose dependent | rect. | 11 | 1 |
| 98 | 111.42 | humidity | 60 | 14400 | > th | dose dependent | rect. | 10 | 2 |
| 108 | 111.62 | wind | 1 | 14400 | < th | dose independent | rect. | 2 | 5 |
| 201 | 112.21 | humidity | 60 | 1440 | > th | dose dependent | rect. | 10 | 3 |
| 276 | 112.47 | humidity | 60 | 14400 | > th | dose independent | sin | 2 | NA |
| 333 | 112.70 | humidity | 60 | 14400 | > th | dose independent | rect. | 10 | 14 |
| 387 | 112.82 | temperature | 30 | 270 | < th | dose dependent | rect. | 23 | 8 |
| 401 | 112.84 | humidity | 60 | 14400 | < th | dose independent | sin | 0 | NA |
| 417 | 112.85 | humidity | 70 | 14400 | < th | dose dependent | rect. | 17 | 21 |
| 459 | 112.95 | temperature | 20 | 90 | > th | dose dependent | rect. | 12 | 9 |
| 487 | 112.97 | humidity | 70 | 14400 | < th | dose dependent | sin | 1 | NA |
| 651 | 113.13 | humidity | 60 | 14400 | > th | dose independent | no | NA | NA |
| 859 | 113.29 | humidity | 70 | 14400 | < th | dose dependent | no | NA | NA |
| 954 | 113.34 | humidity | 60 | 14400 | < th | dose independent | no | NA | NA |