Os01g0745300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
FiT-DB / Search/ Help/ Sample detail
|
Os01g0745300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Conserved hypothetical protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = atmosphere,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 53.18 | 0.343 | 9.06 | -0.93 | 1.39 | -0.116 | -0.731 | -2.02 | -0.201 | 22.5 | 1001 | 18615 | -- | -- |
| 59.3 | 0.361 | 9.09 | -1.27 | 1.39 | -0.223 | -0.692 | -- | -0.229 | 22.6 | 1001 | 18615 | -- | -- |
| 55.14 | 0.346 | 9.06 | -0.876 | 1.4 | -0.118 | -- | -2.07 | -0.195 | 22.5 | 1001 | 17411 | -- | -- |
| 60.79 | 0.366 | 9.08 | -1.25 | 1.39 | -0.307 | -- | -- | -0.217 | 22.6 | 998.7 | 47520 | -- | -- |
| 173.86 | 0.614 | 9.01 | -0.71 | -- | -0.178 | -- | -2.41 | -0.168 | -- | 1004 | 16619 | -- | -- |
| 60.04 | 0.363 | 9.1 | -1.26 | 1.39 | -- | -0.704 | -- | -0.268 | 22.5 | -- | -- | -- | -- |
| 62.08 | 0.369 | 9.1 | -1.23 | 1.4 | -- | -- | -- | -0.266 | 22.5 | -- | -- | -- | -- |
| 179.57 | 0.627 | 9.04 | -1.23 | -- | -0.399 | -- | -- | -0.196 | -- | 998.7 | 47520 | -- | -- |
| 82.82 | 0.424 | 9.03 | -- | 1.4 | 0.837 | -- | -- | 0.0143 | 22.5 | 995.5 | 47520 | -- | -- |
| 181.78 | 0.63 | 9.06 | -1.21 | -- | -- | -- | -- | -0.26 | -- | -- | -- | -- | -- |
| 102.17 | 0.473 | 9.06 | -- | 1.39 | -- | -- | -- | -0.128 | 22.5 | -- | -- | -- | -- |
| 198.31 | 0.656 | 8.99 | -- | -- | 0.821 | -- | -- | 0.0298 | -- | 1015 | 47520 | -- | -- |
| 220.31 | 0.693 | 9.03 | -- | -- | -- | -- | -- | -0.125 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 51.49 | wind | 1 | 43200 | < th | dose dependent | rect. | 10 | 1 |
| 2 | 51.55 | wind | 1 | 43200 | > th | dose independent | rect. | 10 | 2 |
| 3 | 51.56 | wind | 1 | 43200 | < th | dose independent | rect. | 10 | 2 |
| 6 | 51.88 | temperature | 25 | 43200 | > th | dose independent | rect. | 24 | 1 |
| 8 | 51.90 | temperature | 25 | 43200 | < th | dose independent | rect. | 24 | 1 |
| 15 | 51.98 | humidity | 80 | 14400 | > th | dose independent | rect. | 20 | 11 |
| 46 | 52.14 | humidity | 80 | 14400 | < th | dose independent | rect. | 20 | 9 |
| 50 | 52.15 | temperature | 25 | 43200 | > th | dose dependent | rect. | 23 | 1 |
| 94 | 52.22 | temperature | 25 | 43200 | < th | dose independent | rect. | 5 | 1 |
| 103 | 52.24 | temperature | 30 | 43200 | > th | dose independent | rect. | 11 | 1 |
| 108 | 52.25 | wind | 1 | 43200 | < th | dose independent | rect. | 9 | 4 |
| 119 | 52.27 | humidity | 80 | 14400 | > th | dose independent | rect. | 21 | 5 |
| 126 | 52.28 | temperature | 30 | 43200 | < th | dose independent | rect. | 11 | 1 |
| 134 | 52.29 | humidity | 80 | 14400 | < th | dose independent | rect. | 21 | 4 |
| 144 | 52.30 | temperature | 25 | 43200 | > th | dose independent | rect. | 5 | 1 |
| 149 | 52.30 | temperature | 25 | 43200 | > th | dose dependent | rect. | 20 | 1 |
| 180 | 52.35 | humidity | 80 | 43200 | > th | dose independent | rect. | 20 | 2 |
| 217 | 52.40 | wind | 3 | 43200 | < th | dose dependent | rect. | 21 | 1 |
| 238 | 52.42 | temperature | 30 | 43200 | > th | dose independent | rect. | 17 | 19 |
| 264 | 52.44 | temperature | 25 | 43200 | > th | dose independent | rect. | 20 | 1 |
| 265 | 52.44 | humidity | 80 | 14400 | > th | dose independent | rect. | 23 | 1 |
| 267 | 52.44 | humidity | 80 | 43200 | > th | dose independent | rect. | 19 | 4 |
| 273 | 52.44 | temperature | 30 | 43200 | < th | dose independent | rect. | 17 | 19 |
| 274 | 52.44 | temperature | 30 | 43200 | > th | dose dependent | rect. | 11 | 1 |
| 337 | 52.51 | temperature | 30 | 43200 | < th | dose independent | rect. | 17 | 1 |
| 350 | 52.53 | temperature | 25 | 43200 | > th | dose independent | sin | 10 | NA |
| 356 | 52.53 | temperature | 25 | 43200 | > th | dose dependent | sin | 10 | NA |
| 359 | 52.54 | temperature | 25 | 43200 | < th | dose independent | sin | 10 | NA |
| 378 | 52.55 | temperature | 30 | 43200 | > th | dose independent | rect. | 17 | 1 |
| 413 | 52.56 | temperature | 25 | 43200 | > th | dose dependent | rect. | 7 | 1 |
| 422 | 52.57 | atmosphere | 1010 | 14400 | > th | dose independent | rect. | 24 | 5 |
| 466 | 52.57 | temperature | 30 | 43200 | > th | dose dependent | rect. | 17 | 19 |
| 468 | 52.58 | temperature | 30 | 43200 | > th | dose independent | sin | 5 | NA |
| 485 | 52.59 | temperature | 30 | 43200 | < th | dose independent | sin | 5 | NA |
| 487 | 52.59 | atmosphere | 1010 | 14400 | > th | dose independent | rect. | 1 | 3 |
| 562 | 52.62 | temperature | 30 | 43200 | > th | dose independent | rect. | 9 | 9 |
| 603 | 52.63 | temperature | 30 | 43200 | > th | dose independent | sin | 23 | NA |
| 605 | 52.63 | temperature | 30 | 43200 | > th | dose independent | no | NA | NA |
| 619 | 52.63 | temperature | 30 | 43200 | < th | dose independent | rect. | 9 | 9 |
| 771 | 52.64 | temperature | 30 | 43200 | < th | dose independent | no | NA | NA |
| 941 | 52.65 | temperature | 30 | 43200 | < th | dose independent | sin | 22 | NA |
| 948 | 52.65 | humidity | 80 | 43200 | > th | dose independent | rect. | 18 | 6 |