Os01g0744200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os01g0744200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = rect.)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 292.46 | 0.804 | 3.99 | 0.213 | 1.57 | 3.04 | 2.05 | 2.49 | 0.83 | 16.8 | 24.12 | 1284 | 6.72 | 4 |
| 296.55 | 0.802 | 3.93 | 0.483 | 1.55 | 2.41 | 2.16 | -- | 0.95 | 16.7 | 25.85 | 1299 | 6.77 | 4.68 |
| 302.04 | 0.809 | 4.03 | 0.121 | 1.58 | 3.48 | -- | 3.7 | 0.752 | 16.9 | 23.23 | 1310 | 6.38 | 4.67 |
| 307.87 | 0.817 | 3.92 | 0.518 | 1.6 | 2.39 | -- | -- | 0.981 | 16.8 | 26.16 | 1354 | 6.93 | 4.52 |
| 342.2 | 0.862 | 3.98 | -0.421 | -- | 2.87 | -- | 5.14 | 0.48 | -- | 41.35 | 698 | 7.35 | 7.62 |
| 365.56 | 0.896 | 4.04 | -0.281 | 1.66 | -- | 2.03 | -- | 0.486 | 16.7 | -- | -- | -- | -- |
| 376.29 | 0.908 | 4.03 | -0.272 | 1.67 | -- | -- | -- | 0.496 | 16.8 | -- | -- | -- | -- |
| 343.55 | 0.863 | 3.96 | -0.0195 | -- | 2.86 | -- | -- | 0.669 | -- | 40.89 | 641 | 7.12 | 8.88 |
| 313.08 | 0.824 | 3.92 | -- | 1.58 | 2.02 | -- | -- | 0.925 | 16.8 | 26.39 | 1366 | 6.42 | 4.8 |
| 524.38 | 1.07 | 4.01 | -0.334 | -- | -- | -- | -- | 0.452 | -- | -- | -- | -- | -- |
| 378.23 | 0.91 | 4.02 | -- | 1.68 | -- | -- | -- | 0.526 | 16.8 | -- | -- | -- | -- |
| 343.37 | 0.863 | 3.97 | -- | -- | 2.88 | -- | -- | 0.654 | -- | 41.3 | 631 | 7.17 | 8.98 |
| 527.32 | 1.07 | 4.01 | -- | -- | -- | -- | -- | 0.489 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 292.47 | humidity | 70 | 43200 | > th | dose independent | rect. | 18 | 2 |
| 3 | 293.25 | humidity | 70 | 43200 | < th | dose independent | rect. | 18 | 2 |
| 8 | 293.56 | wind | 5 | 43200 | < th | dose independent | rect. | 18 | 1 |
| 10 | 293.59 | humidity | 80 | 43200 | < th | dose dependent | rect. | 18 | 3 |
| 11 | 293.63 | humidity | 70 | 43200 | > th | dose independent | rect. | 18 | 11 |
| 14 | 293.65 | humidity | 80 | 43200 | < th | dose dependent | rect. | 19 | 1 |
| 18 | 293.95 | humidity | 50 | 43200 | > th | dose dependent | rect. | 20 | 1 |
| 21 | 294.15 | wind | 5 | 43200 | > th | dose independent | rect. | 18 | 1 |
| 23 | 294.17 | wind | 5 | 43200 | > th | dose dependent | rect. | 18 | 1 |
| 42 | 294.62 | humidity | 50 | 43200 | > th | dose dependent | rect. | 19 | 15 |
| 60 | 294.80 | wind | 7 | 43200 | < th | dose independent | rect. | 16 | 1 |
| 70 | 294.90 | humidity | 50 | 43200 | > th | dose dependent | rect. | 4 | 6 |
| 86 | 295.11 | humidity | 50 | 43200 | > th | dose dependent | rect. | 6 | 3 |
| 93 | 295.17 | humidity | 90 | 43200 | < th | dose dependent | rect. | 18 | 8 |
| 95 | 295.19 | humidity | 50 | 43200 | > th | dose dependent | sin | 10 | NA |
| 108 | 295.24 | humidity | 80 | 43200 | > th | dose independent | rect. | 20 | 1 |
| 140 | 295.39 | humidity | 90 | 43200 | < th | dose dependent | rect. | 14 | 20 |
| 141 | 295.40 | humidity | 70 | 43200 | > th | dose independent | rect. | 17 | 17 |
| 152 | 295.42 | humidity | 90 | 43200 | < th | dose dependent | rect. | 18 | 22 |
| 169 | 295.47 | humidity | 90 | 43200 | < th | dose dependent | rect. | 7 | 20 |
| 175 | 295.49 | humidity | 50 | 43200 | > th | dose dependent | rect. | 24 | 11 |
| 185 | 295.51 | humidity | 90 | 43200 | < th | dose dependent | rect. | 17 | 19 |
| 216 | 295.57 | humidity | 90 | 43200 | < th | dose dependent | sin | 14 | NA |
| 238 | 295.61 | humidity | 90 | 43200 | < th | dose dependent | no | NA | NA |
| 267 | 295.65 | humidity | 70 | 43200 | > th | dose independent | sin | 12 | NA |
| 274 | 295.66 | humidity | 90 | 43200 | < th | dose dependent | rect. | 24 | 23 |
| 337 | 295.82 | humidity | 90 | 43200 | < th | dose dependent | rect. | 14 | 15 |
| 365 | 295.85 | humidity | 90 | 43200 | < th | dose dependent | rect. | 11 | 18 |
| 426 | 295.94 | wind | 5 | 43200 | < th | dose dependent | rect. | 13 | 1 |
| 568 | 296.30 | humidity | 50 | 43200 | > th | dose dependent | no | NA | NA |
| 573 | 296.31 | wind | 7 | 43200 | > th | dose independent | rect. | 16 | 1 |
| 599 | 296.38 | humidity | 50 | 43200 | > th | dose dependent | rect. | 7 | 23 |
| 608 | 296.40 | humidity | 50 | 43200 | > th | dose dependent | rect. | 3 | 23 |
| 610 | 296.40 | humidity | 50 | 43200 | > th | dose dependent | rect. | 23 | 23 |
| 634 | 296.46 | humidity | 90 | 43200 | < th | dose dependent | rect. | 8 | 1 |
| 686 | 296.57 | temperature | 25 | 1440 | < th | dose dependent | rect. | 7 | 4 |
| 708 | 296.61 | humidity | 70 | 43200 | < th | dose independent | sin | 12 | NA |
| 721 | 296.64 | humidity | 50 | 43200 | > th | dose dependent | rect. | 24 | 1 |
| 746 | 296.70 | humidity | 90 | 43200 | < th | dose dependent | sin | 1 | NA |
| 866 | 296.95 | humidity | 90 | 43200 | < th | dose dependent | rect. | 4 | 13 |
| 888 | 296.99 | humidity | 90 | 43200 | < th | dose dependent | rect. | 5 | 11 |
| 932 | 297.08 | temperature | 25 | 4320 | < th | dose dependent | rect. | 8 | 1 |
| 937 | 297.09 | wind | 3 | 14400 | > th | dose independent | rect. | 11 | 4 |
| 939 | 297.09 | wind | 5 | 14400 | < th | dose dependent | rect. | 11 | 4 |
| 977 | 297.18 | humidity | 70 | 43200 | < th | dose independent | rect. | 16 | 18 |
| 993 | 297.21 | wind | 9 | 43200 | > th | dose independent | rect. | 18 | 1 |