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Os01g0742200

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to Elongation factor EF-2 (Fragment).


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 7.02 (0.0229) R2 : 0.582
β1 : 1.56 (0.0837) R2dD : 0.332 R2D : 0.236
β2 : 0.851 (0.0565) R2dC : 0.209 R2C : 0.173
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.545 (0.0488) R2dN8 : 0.153 R2N8 : 0.0396
σ : 0.43
deviance : 84.28
__
_____
C
peak time of C : 21.1
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
79.02 0.418 6.93 1.98 0.848 0.0872 0.0539 1.74 0.683 21.2 19.79 5631 -- --
82.04 0.422 6.99 1.98 0.769 -0.4 -0.347 -- 0.701 20.7 12.7 12949 -- --
79.03 0.414 6.93 1.98 0.848 0.0878 -- 1.74 0.683 21.2 19.79 5650 -- --
80.91 0.419 6.99 2.05 0.846 -0.553 -- -- 0.687 21.1 15.1 41992 -- --
120.51 0.511 6.9 2 -- 0.16 -- 1.98 0.678 -- 19.8 5810 -- --
84.27 0.43 7.02 1.57 0.851 -- 0.0273 -- 0.545 21.2 -- -- -- --
84.28 0.43 7.02 1.56 0.851 -- -- -- 0.545 21.1 -- -- -- --
121.33 0.515 6.99 1.65 -- -0.345 -- -- 0.597 -- 19.8 5810 -- --
108.02 0.484 7.13 -- 0.87 1.04 -- -- 0.128 21.3 18.7 36354 -- --
126.19 0.525 7 1.57 -- -- -- -- 0.541 -- -- -- -- --
148.8 0.571 7.06 -- 0.851 -- -- -- 0.371 21.3 -- -- -- --
145.4 0.562 7.11 -- -- 1 -- -- 0.038 -- 21.03 47520 -- --
190.97 0.645 7.04 -- -- -- -- -- 0.367 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 75.66 temperature 25 270 < th dose independent rect. 21 11
2 75.75 temperature 10 43200 > th dose independent rect. 9 6
6 76.28 radiation 20 4320 < th dose independent rect. 17 3
8 76.37 temperature 10 43200 > th dose independent rect. 9 9
10 76.43 temperature 10 43200 > th dose independent rect. 10 3
14 76.53 radiation 20 4320 < th dose independent rect. 17 8
18 76.56 temperature 25 270 < th dose independent sin 9 NA
19 76.58 radiation 20 4320 < th dose independent rect. 17 12
24 76.69 radiation 20 4320 < th dose independent rect. 17 1
29 76.77 temperature 25 270 > th dose independent sin 9 NA
34 76.82 wind 9 14400 < th dose independent rect. 3 1
37 76.93 temperature 25 270 > th dose independent rect. 22 12
49 77.28 temperature 20 30 > th dose independent rect. 9 18
64 77.53 humidity 50 43200 > th dose independent rect. 3 1
65 77.54 humidity 50 43200 > th dose independent rect. 1 3
72 77.62 temperature 25 270 > th dose dependent rect. 7 3
74 77.64 temperature 25 270 > th dose dependent rect. 2 8
77 77.66 radiation 30 90 < th dose independent rect. 3 8
87 77.73 radiation 20 1440 < th dose independent rect. 12 1
95 77.80 humidity 70 43200 > th dose independent rect. 1 3
96 77.81 humidity 60 43200 > th dose independent rect. 23 5
109 77.89 temperature 25 270 > th dose independent rect. 20 9
114 77.93 temperature 25 270 > th dose independent rect. 22 5
127 78.03 temperature 15 4320 > th dose independent rect. 3 1
133 78.04 temperature 20 90 > th dose dependent rect. 20 16
135 78.05 humidity 70 43200 < th dose dependent rect. 24 4
139 78.07 humidity 70 43200 < th dose independent rect. 1 2
145 78.09 wind 1 43200 < th dose dependent rect. 9 2
148 78.09 humidity 60 43200 < th dose dependent rect. 22 6
154 78.13 humidity 70 43200 < th dose independent rect. 24 4
159 78.13 radiation 30 4320 > th dose dependent rect. 16 1
175 78.14 temperature 20 30 > th dose independent rect. 11 16
190 78.19 radiation 30 1440 < th dose dependent rect. 12 1
197 78.22 temperature 10 90 > th dose dependent rect. 8 19
199 78.23 humidity 60 43200 < th dose independent rect. 22 6
213 78.27 atmosphere 1005 270 > th dose independent rect. 3 5
221 78.28 radiation 10 4320 > th dose dependent rect. 17 1
233 78.28 temperature 10 10 > th dose dependent rect. 9 19
251 78.34 humidity 70 43200 < th dose dependent rect. 1 1
255 78.35 wind 1 43200 < th dose independent rect. 9 2
259 78.36 wind 9 14400 > th dose dependent rect. 14 1
260 78.37 wind 1 43200 > th dose independent rect. 10 1
262 78.38 humidity 50 43200 < th dose dependent rect. 8 1
263 78.38 radiation 10 720 > th dose dependent rect. 12 1
268 78.40 temperature 20 4320 > th dose independent rect. 11 1
269 78.40 temperature 20 4320 < th dose independent rect. 11 1
275 78.41 temperature 20 4320 > th dose independent rect. 17 1
305 78.48 radiation 40 10 > th dose independent rect. 14 22
314 78.51 humidity 60 43200 < th dose independent rect. 3 1
317 78.51 atmosphere 1005 90 > th dose independent rect. 3 16
340 78.55 wind 1 43200 > th dose independent rect. 9 3
343 78.55 wind 7 30 < th dose independent rect. 3 23
354 78.58 wind 7 14400 < th dose independent rect. 5 5
360 78.59 radiation 40 10 > th dose independent rect. 9 3
384 78.60 radiation 10 10 > th dose dependent rect. 9 3
386 78.60 temperature 20 270 > th dose dependent rect. 19 8
405 78.64 temperature 15 14400 < th dose dependent rect. 7 4
411 78.67 wind 9 14400 > th dose independent rect. 14 1
412 78.67 temperature 15 14400 < th dose dependent rect. 8 2
413 78.67 atmosphere 1000 90 > th dose dependent rect. 3 16
420 78.69 wind 9 14400 < th dose independent rect. 19 1
437 78.71 temperature 25 90 > th dose dependent sin 6 NA
442 78.72 temperature 20 4320 < th dose independent rect. 17 1
457 78.74 wind 7 14400 > th dose independent rect. 5 5
463 78.75 wind 9 14400 > th dose independent rect. 24 1
464 78.75 temperature 15 14400 < th dose independent rect. 7 1
469 78.75 temperature 10 43200 < th dose independent rect. 20 1
504 78.75 wind 9 14400 > th dose dependent rect. 24 1
510 78.75 temperature 10 43200 < th dose dependent rect. 20 1
549 78.76 temperature 10 43200 < th dose independent rect. 8 13
552 78.76 temperature 10 43200 < th dose dependent rect. 8 13
553 78.77 radiation 20 720 > th dose independent rect. 12 1
554 78.77 temperature 20 4320 > th dose independent rect. 14 9
560 78.77 humidity 50 43200 < th dose dependent rect. 19 14
561 78.78 wind 3 4320 < th dose independent rect. 8 1
565 78.78 temperature 20 4320 > th dose independent rect. 16 4
582 78.78 radiation 40 90 < th dose dependent rect. 3 8
598 78.80 temperature 20 10 > th dose independent rect. 20 8
604 78.81 temperature 20 4320 > th dose independent rect. 10 13
607 78.81 radiation 20 90 > th dose dependent rect. 8 4
611 78.82 temperature 20 4320 > th dose independent rect. 14 1
622 78.82 wind 7 14400 > th dose dependent rect. 6 4
647 78.85 wind 1 43200 > th dose independent rect. 3 21
650 78.85 temperature 25 270 > th dose dependent rect. 23 7
669 78.87 radiation 20 90 > th dose dependent rect. 16 20
670 78.88 wind 7 14400 > th dose independent sin 7 NA
671 78.88 wind 7 14400 < th dose independent sin 7 NA
675 78.88 wind 5 14400 > th dose independent rect. 23 16
679 78.89 temperature 25 270 < th dose independent rect. 3 5
687 78.90 humidity 50 43200 < th dose independent rect. 19 1
692 78.90 wind 1 43200 > th dose independent rect. 3 19
725 78.92 temperature 25 270 > th dose independent rect. 6 4
728 78.92 temperature 20 4320 < th dose independent rect. 10 14
730 78.92 wind 5 14400 < th dose independent rect. 23 16
733 78.93 radiation 40 4320 > th dose independent rect. 7 1
758 78.93 radiation 40 4320 > th dose dependent rect. 7 1
778 78.94 temperature 20 4320 > th dose independent sin 19 NA
804 78.96 temperature 20 4320 < th dose independent rect. 14 9
811 78.96 temperature 10 270 > th dose dependent rect. 22 14
813 78.96 atmosphere 1000 10 > th dose dependent rect. 4 16
814 78.96 wind 5 14400 > th dose dependent rect. 22 17
826 78.97 temperature 20 10 > th dose dependent rect. 20 8
840 78.99 wind 7 14400 > th dose independent rect. 6 1
846 78.99 wind 1 43200 > th dose independent rect. 6 5
853 78.99 wind 1 43200 < th dose dependent rect. 6 6
859 79.00 wind 3 4320 > th dose independent rect. 8 1
862 79.00 temperature 20 4320 < th dose independent rect. 10 9
863 79.00 temperature 20 4320 > th dose independent rect. 10 10
865 79.00 wind 7 14400 < th dose independent rect. 21 14
871 79.00 humidity 50 43200 < th dose dependent rect. 3 6
883 79.01 temperature 25 90 < th dose independent rect. 3 8
892 79.01 wind 7 14400 > th dose dependent sin 7 NA
896 79.02 wind 9 14400 > th dose independent rect. 18 1
901 79.02 wind 7 14400 > th dose independent rect. 21 14
911 79.03 wind 1 4320 < th dose independent rect. 5 1
935 79.04 wind 1 43200 > th dose independent rect. 5 8
942 79.04 wind 1 43200 > th dose independent rect. 3 17
950 79.05 temperature 20 4320 < th dose independent sin 19 NA
954 79.05 wind 9 14400 < th dose independent rect. 3 4
955 79.05 radiation 30 90 > th dose independent rect. 8 4
970 79.05 temperature 30 90 < th dose dependent rect. 3 8