Os01g0741200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein kinase-like domain containing protein.
FiT-DB / Search/ Help/ Sample detail
|
Os01g0741200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Protein kinase-like domain containing protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 108.25 | 0.489 | 3.59 | -0.21 | 0.508 | 1.36 | -1.9 | 3.35 | 0.0204 | 18.9 | 25.64 | 647 | -- | -- |
| 110.47 | 0.49 | 3.64 | -0.682 | 0.453 | 1.66 | -1.42 | -- | -0.106 | 18.9 | 25.41 | 646 | -- | -- |
| 116.44 | 0.503 | 3.58 | -0.173 | 0.57 | 1.28 | -- | 3.4 | 0.06 | 19.7 | 26.66 | 648 | -- | -- |
| 115.41 | 0.5 | 3.65 | -0.649 | 0.473 | 1.58 | -- | -- | -0.114 | 19.7 | 25.35 | 638 | -- | -- |
| 122.58 | 0.516 | 3.68 | -0.901 | -- | 2.03 | -- | -0.736 | -0.262 | -- | 24.27 | 581 | -- | -- |
| 162.5 | 0.598 | 3.64 | -0.35 | 1.13 | -- | -0.664 | -- | -0.0113 | 19.3 | -- | -- | -- | -- |
| 163.66 | 0.599 | 3.65 | -0.336 | 1.13 | -- | -- | -- | -0.013 | 19.3 | -- | -- | -- | -- |
| 122.63 | 0.516 | 3.66 | -0.729 | -- | 1.95 | -- | -- | -0.203 | -- | 24.59 | 595 | -- | -- |
| 124.48 | 0.52 | 3.6 | -- | 0.779 | 1.4 | -- | -- | 0.134 | 19.1 | 29.21 | 742 | -- | -- |
| 231.29 | 0.711 | 3.62 | -0.355 | -- | -- | -- | -- | -0.0319 | -- | -- | -- | -- | -- |
| 166.64 | 0.604 | 3.64 | -- | 1.13 | -- | -- | -- | 0.0244 | 19.3 | -- | -- | -- | -- |
| 135.92 | 0.543 | 3.63 | -- | -- | 1.83 | -- | -- | -0.0957 | -- | 24.85 | 579 | -- | -- |
| 234.62 | 0.715 | 3.61 | -- | -- | -- | -- | -- | 0.00754 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 107.30 | temperature | 30 | 720 | < th | dose independent | rect. | 15 | 22 |
| 4 | 107.90 | temperature | 30 | 720 | < th | dose independent | rect. | 24 | 23 |
| 7 | 108.23 | temperature | 30 | 720 | > th | dose independent | rect. | 16 | 22 |
| 8 | 108.25 | temperature | 30 | 720 | < th | dose independent | rect. | 1 | 20 |
| 10 | 108.31 | temperature | 30 | 720 | < th | dose independent | rect. | 3 | 17 |
| 18 | 108.61 | temperature | 25 | 720 | > th | dose dependent | rect. | 22 | 21 |
| 28 | 108.74 | temperature | 30 | 720 | < th | dose independent | rect. | 5 | 15 |
| 35 | 108.86 | temperature | 30 | 720 | < th | dose independent | sin | 0 | NA |
| 52 | 109.03 | temperature | 30 | 720 | < th | dose independent | rect. | 18 | 23 |
| 63 | 109.11 | temperature | 30 | 720 | > th | dose independent | no | NA | NA |
| 64 | 109.11 | temperature | 30 | 720 | > th | dose independent | rect. | 8 | 11 |
| 195 | 109.46 | temperature | 30 | 720 | > th | dose independent | sin | 0 | NA |
| 200 | 109.47 | temperature | 30 | 720 | < th | dose independent | no | NA | NA |
| 211 | 109.61 | temperature | 25 | 720 | > th | dose dependent | rect. | 15 | 23 |
| 218 | 109.67 | temperature | 25 | 720 | > th | dose dependent | no | NA | NA |
| 219 | 109.67 | temperature | 25 | 720 | > th | dose dependent | rect. | 6 | 23 |
| 270 | 109.88 | temperature | 30 | 720 | > th | dose independent | rect. | 11 | 23 |
| 274 | 109.89 | temperature | 25 | 720 | > th | dose dependent | rect. | 13 | 23 |
| 277 | 109.94 | temperature | 25 | 720 | > th | dose dependent | sin | 23 | NA |
| 289 | 110.07 | temperature | 30 | 720 | < th | dose independent | rect. | 8 | 23 |
| 299 | 110.17 | temperature | 30 | 720 | < th | dose independent | rect. | 8 | 9 |
| 322 | 110.55 | temperature | 30 | 720 | < th | dose independent | rect. | 3 | 23 |
| 324 | 110.58 | temperature | 30 | 720 | < th | dose independent | rect. | 9 | 6 |
| 325 | 110.59 | temperature | 30 | 720 | > th | dose independent | sin | 10 | NA |
| 344 | 110.64 | temperature | 30 | 720 | < th | dose independent | rect. | 8 | 15 |
| 487 | 110.97 | temperature | 30 | 720 | < th | dose independent | rect. | 9 | 17 |
| 521 | 111.19 | temperature | 30 | 720 | < th | dose independent | rect. | 5 | 23 |
| 575 | 111.44 | temperature | 30 | 720 | > th | dose dependent | sin | 9 | NA |
| 667 | 111.94 | temperature | 30 | 720 | < th | dose independent | rect. | 5 | 8 |
| 708 | 112.28 | temperature | 30 | 720 | < th | dose independent | sin | 9 | NA |
| 796 | 112.87 | temperature | 30 | 720 | < th | dose independent | rect. | 11 | 23 |
| 974 | 114.15 | temperature | 30 | 720 | < th | dose independent | rect. | 11 | 2 |
| 985 | 114.23 | temperature | 25 | 270 | > th | dose dependent | sin | 14 | NA |