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Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os01g0740700

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 3.06 (0.0209) R2 : 0.016
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.12 (0.044) R2dN8 : 0.0207 R2N8 : 0.016
σ : 0.394
deviance : 71.16
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = humidity, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
69.43 0.392 3.07 0.162 0.153 -0.195 0.407 -0.567 0.105 5.42 89.17 252 -- --
69.89 0.389 3.06 0.144 0.144 -0.197 0.113 -- 0.103 5.29 89 248 -- --
69.7 0.389 3.07 0.147 0.142 -0.179 -- -0.318 0.103 5.18 89 243 -- --
69.91 0.389 3.06 0.141 0.143 -0.196 -- -- 0.101 5.12 89 248 -- --
70.35 0.391 3.06 0.141 -- -0.0569 -- -0.339 0.125 -- 89.17 164 -- --
70.64 0.394 3.06 0.114 0.0357 -- 0.16 -- 0.133 8.05 -- -- -- --
70.67 0.394 3.06 0.117 0.0477 -- -- -- 0.132 5.58 -- -- -- --
70.55 0.391 3.06 0.127 -- -0.0962 -- -- 0.118 -- 91 218 -- --
70.42 0.391 3.07 -- 0.134 -0.173 -- -- 0.0887 5.06 89.01 239 -- --
70.79 0.393 3.06 0.119 -- -- -- -- 0.133 -- -- -- -- --
71.03 0.394 3.06 -- 0.0497 -- -- -- 0.119 5.48 -- -- -- --
70.96 0.392 3.06 -- -- -0.093 -- -- 0.107 -- 92.43 165 -- --
71.16 0.394 3.06 -- -- -- -- -- 0.12 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 59.53 temperature 20.0 30 > th dose dependent rect. 2 1
2 59.54 wind 3.0 30 < th dose dependent rect. 2 1
6 59.59 temperature 20.0 30 > th dose independent rect. 2 1
7 59.59 atmosphere 1005.0 30 > th dose dependent rect. 2 1
8 59.60 wind 3.0 30 < th dose independent rect. 2 1
10 59.61 humidity 80.0 30 > th dose independent rect. 2 1
12 59.64 temperature 25.0 30 < th dose independent rect. 2 1
13 59.66 wind 9.0 30 < th dose independent rect. 2 1
14 59.66 temperature 10.0 30 > th dose independent rect. 2 1
17 59.66 humidity 50.0 30 > th dose independent rect. 2 1
20 59.66 atmosphere 995.0 30 > th dose independent rect. 2 1
21 59.66 atmosphere 1010.0 30 < th dose independent rect. 2 1
23 59.66 radiation 1.0 30 < th dose independent rect. 2 1
28 59.66 precipitation 0.1 30 < th dose independent rect. 2 1
29 59.66 temperature 10.0 30 > th dose independent rect. 3 23
30 59.66 humidity 50.0 30 > th dose dependent rect. 2 1
32 59.66 radiation 1.0 30 < th dose dependent rect. 2 1
37 59.66 precipitation 0.1 30 < th dose dependent rect. 2 1
45 59.73 atmosphere 1005.0 30 > th dose independent rect. 2 1
48 59.85 atmosphere 1015.0 30 < th dose dependent rect. 2 1
49 60.14 temperature 30.0 30 < th dose dependent rect. 2 1
58 60.80 wind 1.0 30 > th dose independent rect. 2 1
67 61.09 wind 9.0 30 < th dose independent rect. 3 23
109 65.74 atmosphere 995.0 30 > th dose independent rect. 3 23
117 66.75 precipitation 0.1 30 < th dose independent rect. 3 23
118 66.75 precipitation 0.1 30 < th dose dependent rect. 3 23
119 66.80 wind 1.0 30 < th dose independent rect. 24 3
120 66.89 temperature 25.0 270 > th dose independent rect. 1 1
123 67.07 temperature 15.0 720 > th dose independent rect. 11 16
126 67.18 temperature 15.0 720 > th dose independent rect. 3 8
127 67.18 atmosphere 1015.0 720 < th dose independent rect. 3 8
129 67.25 wind 9.0 720 < th dose independent rect. 3 8
131 67.32 atmosphere 995.0 720 > th dose independent rect. 3 8
133 67.35 temperature 15.0 720 > th dose independent rect. 15 8
139 67.44 radiation 40.0 720 < th dose independent rect. 15 8
140 67.45 temperature 15.0 720 > th dose independent rect. 23 16
144 67.55 wind 9.0 720 < th dose independent rect. 23 16
146 67.63 radiation 20.0 10 < th dose dependent rect. 3 23
150 67.75 atmosphere 1015.0 1440 < th dose independent rect. 3 1
151 67.81 wind 9.0 720 < th dose independent rect. 15 8
152 67.81 humidity 50.0 720 > th dose independent rect. 3 8
154 67.82 atmosphere 1015.0 30 < th dose independent rect. 3 23
160 67.93 wind 1.0 10 < th dose independent rect. 14 13
163 67.96 wind 1.0 10 < th dose independent rect. 17 10
165 67.96 radiation 10.0 30 < th dose independent rect. 3 23
170 67.99 wind 9.0 1440 < th dose independent rect. 3 1
171 67.99 temperature 10.0 1440 > th dose independent rect. 3 1
174 67.99 temperature 30.0 1440 < th dose independent rect. 3 1
178 67.99 humidity 50.0 1440 > th dose independent rect. 3 1
187 67.99 atmosphere 995.0 1440 > th dose independent rect. 3 1
188 67.99 radiation 1.0 1440 < th dose independent rect. 3 1
208 67.99 temperature 10.0 1440 > th dose independent rect. 4 23
211 67.99 radiation 1.0 1440 < th dose dependent rect. 3 1
229 68.02 wind 1.0 30 > th dose dependent rect. 2 1
233 68.03 wind 9.0 30 < th dose dependent rect. 3 23
237 68.07 humidity 90.0 90 < th dose independent rect. 2 1
263 68.22 temperature 10.0 30 > th dose dependent rect. 3 23
267 68.24 humidity 50.0 30 > th dose independent rect. 3 23
268 68.25 wind 1.0 10 < th dose independent rect. 7 20
280 68.34 atmosphere 1005.0 30 > th dose dependent rect. 16 1
282 68.35 wind 3.0 10 < th dose dependent rect. 22 5
284 68.36 humidity 50.0 720 > th dose independent rect. 23 16
286 68.37 atmosphere 1005.0 30 > th dose independent rect. 16 1
288 68.38 radiation 30.0 30 < th dose independent rect. 3 8
289 68.38 precipitation 0.1 720 < th dose independent rect. 23 16
293 68.38 precipitation 0.1 720 < th dose dependent rect. 23 16
294 68.39 precipitation 0.1 720 < th dose independent rect. 15 8
297 68.39 wind 5.0 30 > th dose dependent rect. 16 1
299 68.39 precipitation 0.1 720 < th dose dependent rect. 15 8
301 68.41 temperature 30.0 30 < th dose independent rect. 16 1
302 68.41 humidity 60.0 30 > th dose independent rect. 16 1
305 68.41 wind 7.0 10 < th dose dependent rect. 20 7
307 68.41 atmosphere 995.0 30 > th dose dependent rect. 3 8
313 68.43 precipitation 0.1 720 < th dose independent rect. 3 8
315 68.43 precipitation 0.1 720 < th dose dependent rect. 3 8
316 68.44 wind 7.0 30 < th dose independent rect. 3 17
327 68.47 atmosphere 995.0 720 > th dose independent rect. 23 16
330 68.47 wind 9.0 30 < th dose dependent rect. 3 17
335 68.48 humidity 50.0 30 > th dose dependent rect. 3 8
336 68.49 wind 7.0 30 > th dose independent rect. 16 1
337 68.49 atmosphere 995.0 30 > th dose dependent rect. 20 7
339 68.51 atmosphere 1005.0 30 > th dose independent rect. 20 7
341 68.51 wind 9.0 30 < th dose dependent rect. 3 8
342 68.52 wind 9.0 720 < th dose independent rect. 11 16
349 68.53 atmosphere 1000.0 30 > th dose independent rect. 3 8
350 68.53 atmosphere 995.0 30 > th dose independent rect. 3 17
356 68.54 humidity 50.0 30 > th dose dependent rect. 16 1
368 68.57 temperature 25.0 90 > th dose independent rect. 4 1
374 68.59 radiation 40.0 10 < th dose dependent rect. 3 8
375 68.60 wind 5.0 30 < th dose independent rect. 20 7
399 68.65 humidity 50.0 30 > th dose dependent rect. 20 7
405 68.66 humidity 90.0 270 < th dose independent rect. 19 8
414 68.67 humidity 90.0 270 < th dose independent rect. 19 10
420 68.68 atmosphere 1015.0 30 < th dose independent rect. 20 7
442 68.69 radiation 40.0 90 < th dose independent rect. 11 16
457 68.70 temperature 15.0 90 > th dose independent rect. 3 17
460 68.71 precipitation 0.1 30 < th dose independent rect. 20 7
462 68.71 humidity 60.0 30 > th dose independent rect. 3 8
463 68.71 precipitation 0.1 30 < th dose dependent rect. 20 7
467 68.72 atmosphere 1015.0 30 < th dose independent rect. 11 16
468 68.72 precipitation 0.1 720 < th dose independent rect. 11 16
473 68.72 precipitation 0.1 720 < th dose dependent rect. 11 16
474 68.73 temperature 10.0 30 > th dose independent rect. 20 7
475 68.73 temperature 30.0 30 < th dose independent rect. 20 7
476 68.73 humidity 50.0 30 > th dose independent rect. 20 7
480 68.73 atmosphere 995.0 30 > th dose independent rect. 20 7
481 68.73 radiation 1.0 30 < th dose independent rect. 20 7
486 68.73 wind 7.0 30 < th dose independent rect. 3 8
487 68.73 temperature 30.0 30 < th dose independent rect. 3 8
494 68.73 atmosphere 1015.0 30 < th dose independent rect. 3 17
496 68.73 radiation 1.0 30 < th dose dependent rect. 20 7
501 68.74 humidity 90.0 270 > th dose independent rect. 3 1
504 68.74 temperature 10.0 30 > th dose independent rect. 3 8
508 68.74 atmosphere 1015.0 30 < th dose independent rect. 3 8
510 68.74 temperature 10.0 30 > th dose independent rect. 11 16
516 68.75 temperature 25.0 30 > th dose independent rect. 24 9
517 68.75 precipitation 0.1 30 < th dose independent rect. 11 16
518 68.75 temperature 25.0 90 > th dose dependent rect. 4 1
525 68.75 precipitation 0.1 30 < th dose dependent rect. 11 16
528 68.76 temperature 25.0 270 < th dose independent rect. 24 7
539 68.76 temperature 10.0 30 > th dose dependent rect. 3 17
542 68.77 temperature 25.0 10 > th dose independent rect. 24 11
543 68.77 wind 9.0 30 < th dose independent rect. 11 16
550 68.78 humidity 90.0 270 > th dose independent rect. 23 7
551 68.78 temperature 15.0 720 > th dose independent rect. 7 8
559 68.79 wind 1.0 10 > th dose independent rect. 17 14
574 68.80 temperature 10.0 30 > th dose dependent rect. 3 8
587 68.81 wind 9.0 30 < th dose dependent rect. 3 19
588 68.82 radiation 10.0 10 < th dose independent rect. 16 1
607 68.83 precipitation 0.1 30 < th dose independent rect. 3 17
614 68.83 precipitation 0.1 30 < th dose dependent rect. 3 17
616 68.84 precipitation 0.1 30 < th dose independent rect. 3 8
619 68.84 humidity 70.0 30 > th dose dependent rect. 22 5
620 68.84 precipitation 0.1 30 < th dose dependent rect. 3 8
636 68.85 temperature 15.0 720 > th dose independent rect. 3 16
638 68.85 temperature 15.0 720 > th dose independent rect. 15 16
655 68.85 wind 9.0 30 < th dose dependent rect. 3 12
682 68.86 atmosphere 995.0 90 > th dose dependent rect. 3 6
693 68.87 atmosphere 1015.0 30 < th dose independent rect. 22 5
705 68.88 humidity 90.0 270 < th dose independent rect. 22 5
712 68.88 humidity 90.0 270 > th dose independent rect. 21 9
728 68.89 atmosphere 1000.0 90 > th dose independent rect. 3 6
729 68.89 temperature 10.0 1440 > th dose independent rect. 21 7
732 68.89 temperature 30.0 1440 < th dose independent rect. 21 7
736 68.89 humidity 50.0 1440 > th dose independent rect. 21 7
742 68.89 atmosphere 995.0 1440 > th dose independent rect. 21 7
744 68.89 radiation 1.0 1440 < th dose independent rect. 21 7
768 68.89 humidity 60.0 720 > th dose independent rect. 19 8
782 68.89 radiation 10.0 1440 < th dose dependent rect. 21 7
788 68.89 atmosphere 995.0 30 > th dose dependent rect. 11 16
801 68.90 humidity 90.0 270 < th dose independent rect. 19 20
802 68.90 temperature 10.0 30 > th dose dependent rect. 20 7
807 68.91 humidity 80.0 30 > th dose independent rect. 22 5
823 68.91 atmosphere 1015.0 720 < th dose independent rect. 23 16
837 68.92 temperature 15.0 720 > th dose independent rect. 19 8
875 68.94 precipitation 0.1 30 < th dose independent rect. 22 5
883 68.94 precipitation 0.1 30 < th dose dependent rect. 22 5
899 68.95 temperature 10.0 30 > th dose independent rect. 22 5
900 68.95 temperature 30.0 30 < th dose independent rect. 22 5
901 68.95 humidity 50.0 30 > th dose independent rect. 22 5
904 68.95 atmosphere 995.0 30 > th dose independent rect. 22 5
905 68.95 radiation 1.0 30 < th dose independent rect. 22 5
921 68.95 atmosphere 1015.0 30 < th dose independent rect. 3 19
922 68.95 humidity 80.0 270 > th dose dependent rect. 3 1
926 68.95 radiation 1.0 30 < th dose dependent rect. 22 5
936 68.95 wind 9.0 30 < th dose dependent rect. 15 12
954 68.96 radiation 40.0 720 < th dose independent rect. 15 16
962 68.96 temperature 30.0 30 < th dose dependent rect. 16 1
971 68.96 radiation 40.0 43200 < th dose dependent rect. 21 7
997 68.98 humidity 90.0 90 < th dose independent rect. 1 4
999 68.98 humidity 50.0 43200 > th dose independent rect. 23 5