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Os01g0740300

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 7.1 (0.0348) R2 : 0.601
β1 : 2.17 (0.131) R2dD : 0.264 R2D : 0.0734
β2 : 1.39 (0.0875) R2dC : 0.221 R2C : 0.187
β3 : 1.23 (0.0969) R2dE : 0.149 R2E : -0.00511
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.89 (0.0744) R2dN8 : 0.169 R2N8 : 0.0609
σ : 0.65
deviance : 194.7
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C
peak time of C : 3.55
E
wheather : temperature
threshold : 29.5
memory length : 1519
response mode : < th
dose dependency : dose independent
G
type of G : no
peak or start time of G : --
open length of G : --

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Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = < th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
193.46 0.653 7.17 1.59 1.41 0.972 -0.02 2.29 0.763 3.56 29.5 1507 -- --
195.16 0.651 7.12 2.18 1.4 1.23 0.0443 -- 0.819 3.52 29.5 1530 -- --
193.46 0.648 7.17 1.59 1.41 0.973 -- 2.29 0.763 3.56 29.49 1508 -- --
194.7 0.65 7.1 2.17 1.39 1.23 -- -- 0.89 3.55 29.5 1519 -- --
238.12 0.719 7.05 2.03 -- 1.32 -- 0.637 1.13 -- 26.5 241 -- --
263.17 0.761 7.12 1.78 1.35 -- -0.249 -- 0.819 3.66 -- -- -- --
263.36 0.76 7.12 1.78 1.35 -- -- -- 0.82 3.65 -- -- -- --
238.22 0.719 7.05 2.16 -- 1.3 -- -- 1.18 -- 26.49 245 -- --
312.27 0.823 7.16 -- 1.33 0.926 -- -- 0.633 3.43 29.5 1638 -- --
364.9 0.893 7.12 1.84 -- -- -- -- 0.856 -- -- -- -- --
346.92 0.871 7.16 -- 1.39 -- -- -- 0.622 3.64 -- -- -- --
359.01 0.882 7.12 -- -- 1.14 -- -- 0.867 -- 26.64 259 -- --
453.93 0.994 7.16 -- -- -- -- -- 0.652 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 182.99 precipitation 0.1 43200 > th dose dependent rect. 16 2
3 187.41 precipitation 0.1 43200 > th dose dependent rect. 17 4
6 190.39 atmosphere 1000.0 43200 > th dose independent rect. 22 1
8 190.42 atmosphere 1000.0 43200 < th dose independent rect. 23 1
12 190.45 precipitation 0.1 14400 > th dose dependent rect. 17 10
13 190.63 precipitation 0.1 14400 > th dose dependent rect. 20 22
16 190.78 wind 9.0 14400 > th dose dependent rect. 18 17
23 191.52 precipitation 0.1 14400 > th dose dependent rect. 17 7
24 191.53 temperature 25.0 1440 > th dose dependent rect. 8 2
32 191.82 precipitation 0.1 43200 < th dose independent rect. 17 1
33 191.82 precipitation 0.1 43200 < th dose dependent rect. 17 1
34 191.84 precipitation 0.1 43200 > th dose independent rect. 17 1
39 192.22 wind 9.0 43200 > th dose dependent sin 14 NA
57 193.13 wind 9.0 14400 > th dose dependent rect. 20 15
59 193.16 wind 9.0 43200 > th dose dependent rect. 14 17
71 193.55 wind 9.0 14400 < th dose independent rect. 18 17
79 193.83 precipitation 0.1 43200 > th dose dependent rect. 20 1
86 193.98 wind 9.0 43200 < th dose independent rect. 17 22
87 194.00 wind 9.0 14400 < th dose independent rect. 20 15
88 194.03 wind 9.0 14400 > th dose independent rect. 18 17
92 194.09 precipitation 0.1 14400 > th dose dependent rect. 17 14
93 194.09 wind 7.0 43200 > th dose dependent rect. 17 22
95 194.15 precipitation 0.1 14400 > th dose dependent rect. 8 10
98 194.18 atmosphere 1000.0 43200 < th dose independent rect. 21 10
99 194.18 wind 5.0 14400 > th dose dependent rect. 6 3
109 194.27 precipitation 0.1 14400 > th dose dependent rect. 6 12
114 194.30 atmosphere 1000.0 43200 < th dose independent rect. 20 16
117 194.32 temperature 30.0 1440 < th dose independent rect. 10 6
119 194.34 atmosphere 1000.0 43200 > th dose independent rect. 21 10
126 194.37 precipitation 0.1 14400 > th dose dependent rect. 4 14
140 194.44 atmosphere 1000.0 43200 > th dose independent rect. 21 15
149 194.53 wind 9.0 43200 > th dose independent rect. 17 22
151 194.54 wind 7.0 43200 > th dose dependent rect. 3 18
167 194.71 temperature 30.0 1440 < th dose independent rect. 6 10
168 194.71 temperature 30.0 1440 < th dose independent rect. 4 12
170 194.71 temperature 30.0 1440 < th dose independent rect. 19 21
178 194.73 temperature 30.0 1440 < th dose independent rect. 8 8
189 194.75 wind 9.0 43200 > th dose dependent rect. 20 2
236 194.98 atmosphere 1000.0 43200 < th dose independent rect. 4 1
248 195.10 atmosphere 1000.0 43200 < th dose independent sin 8 NA
253 195.13 wind 9.0 14400 > th dose independent rect. 20 15
260 195.16 wind 5.0 14400 > th dose independent rect. 6 3
292 195.36 wind 9.0 43200 > th dose independent sin 13 NA
297 195.37 atmosphere 1000.0 43200 > th dose independent sin 8 NA
300 195.37 wind 9.0 43200 > th dose dependent rect. 14 11
304 195.38 wind 7.0 43200 > th dose dependent rect. 8 13
319 195.44 temperature 30.0 1440 > th dose independent rect. 11 5
357 195.60 atmosphere 1000.0 43200 > th dose independent rect. 4 1
384 195.68 wind 7.0 43200 > th dose dependent rect. 10 23
390 195.71 wind 7.0 43200 > th dose dependent rect. 13 23
403 195.78 precipitation 0.1 14400 > th dose independent rect. 17 5
406 195.79 precipitation 0.1 4320 < th dose independent rect. 13 5
407 195.79 precipitation 0.1 4320 < th dose dependent rect. 13 5
412 195.82 temperature 30.0 1440 > th dose independent rect. 8 8
436 195.88 wind 9.0 43200 > th dose dependent rect. 17 14
437 195.89 precipitation 0.1 14400 < th dose independent rect. 17 5
441 195.89 precipitation 0.1 14400 < th dose dependent rect. 17 5
471 195.98 precipitation 0.1 14400 > th dose dependent rect. 8 19
472 195.99 wind 9.0 43200 < th dose independent rect. 20 19
495 196.08 precipitation 0.1 14400 > th dose dependent rect. 10 17
505 196.13 radiation 1.0 43200 < th dose dependent rect. 21 7
514 196.16 wind 7.0 43200 > th dose dependent no NA NA
534 196.22 wind 9.0 43200 > th dose dependent rect. 14 7
548 196.27 precipitation 0.1 4320 < th dose independent rect. 9 9
551 196.27 precipitation 0.1 4320 < th dose dependent rect. 9 9
558 196.30 precipitation 0.1 14400 > th dose dependent rect. 6 21
560 196.32 precipitation 0.1 4320 > th dose independent rect. 12 6
580 196.38 temperature 30.0 1440 < th dose independent rect. 11 1
588 196.39 precipitation 0.1 14400 > th dose dependent sin 17 NA
602 196.42 precipitation 0.1 4320 > th dose independent rect. 9 9
611 196.44 precipitation 0.1 14400 > th dose dependent rect. 8 15
620 196.46 wind 5.0 14400 < th dose independent rect. 6 3
628 196.48 wind 7.0 43200 > th dose independent rect. 3 18
672 196.56 precipitation 0.1 14400 > th dose dependent rect. 10 13
676 196.58 wind 9.0 43200 < th dose independent sin 14 NA
700 196.64 temperature 30.0 1440 < th dose independent sin 3 NA
718 196.68 precipitation 0.1 14400 > th dose dependent rect. 6 17
756 196.75 temperature 30.0 1440 > th dose independent rect. 13 3
760 196.76 wind 9.0 43200 < th dose independent rect. 13 22
763 196.77 wind 9.0 43200 < th dose independent rect. 13 19
788 196.83 temperature 30.0 1440 > th dose independent rect. 11 1
791 196.83 wind 9.0 43200 > th dose independent rect. 14 18
822 196.90 wind 7.0 43200 > th dose independent rect. 23 22
835 196.94 atmosphere 1000.0 43200 > th dose independent rect. 11 1
842 196.95 atmosphere 1000.0 43200 < th dose independent rect. 11 1
892 197.11 atmosphere 1000.0 43200 < th dose dependent rect. 19 1
900 197.14 humidity 50.0 14400 < th dose independent rect. 15 3
915 197.15 wind 7.0 43200 < th dose independent rect. 3 18
972 197.26 wind 7.0 43200 > th dose independent rect. 19 2