Os01g0739700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Glycoside hydrolase, family 17 protein.
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Os01g0739700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Glycoside hydrolase, family 17 protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 142.5 | 0.561 | 7 | 0.381 | 0.922 | 0.968 | -0.923 | -2.17 | -0.274 | 22.1 | 10.09 | 230 | -- | -- |
| 152.58 | 0.575 | 6.99 | 0.47 | 1.07 | 1.07 | 0.522 | -- | -0.234 | 22.6 | 10.01 | 194 | -- | -- |
| 144.44 | 0.56 | 6.99 | 0.437 | 0.943 | 0.986 | -- | -1.56 | -0.256 | 22.2 | 10.15 | 222 | -- | -- |
| 153.74 | 0.577 | 6.98 | 0.455 | 0.974 | 0.932 | -- | -- | -0.236 | 22 | 10.09 | 192 | -- | -- |
| 161.81 | 0.592 | 6.97 | 0.409 | -- | 1.07 | -- | -1.76 | -0.256 | -- | 10 | 754 | -- | -- |
| 169.96 | 0.611 | 6.95 | 0.61 | 0.865 | -- | -1.04 | -- | -0.146 | 18 | -- | -- | -- | -- |
| 172.43 | 0.615 | 6.95 | 0.617 | 0.862 | -- | -- | -- | -0.151 | 18.2 | -- | -- | -- | -- |
| 164.64 | 0.598 | 6.95 | 0.636 | -- | 1.16 | -- | -- | -0.206 | -- | 5.92 | 805 | -- | -- |
| 159.71 | 0.589 | 6.97 | -- | 1 | 0.975 | -- | -- | -0.255 | 22.3 | 10.09 | 191 | -- | -- |
| 210.94 | 0.679 | 6.94 | 0.594 | -- | -- | -- | -- | -0.17 | -- | -- | -- | -- | -- |
| 182.47 | 0.632 | 6.97 | -- | 0.853 | -- | -- | -- | -0.22 | 18.3 | -- | -- | -- | -- |
| 172.95 | 0.612 | 6.98 | -- | -- | 1.02 | -- | -- | -0.333 | -- | 10 | 818 | -- | -- |
| 220.24 | 0.693 | 6.95 | -- | -- | -- | -- | -- | -0.236 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 133.85 | humidity | 90 | 10 | < th | dose dependent | rect. | 8 | 8 |
| 4 | 136.25 | temperature | 30 | 90 | < th | dose dependent | rect. | 1 | 18 |
| 5 | 136.36 | temperature | 30 | 90 | < th | dose dependent | rect. | 3 | 16 |
| 8 | 137.01 | radiation | 10 | 270 | > th | dose independent | rect. | 15 | 22 |
| 9 | 137.02 | radiation | 10 | 270 | > th | dose independent | sin | 4 | NA |
| 14 | 137.51 | temperature | 30 | 90 | < th | dose dependent | rect. | 1 | 20 |
| 17 | 137.63 | temperature | 30 | 10 | < th | dose dependent | rect. | 2 | 16 |
| 26 | 137.95 | temperature | 30 | 10 | < th | dose dependent | sin | 2 | NA |
| 28 | 137.99 | humidity | 80 | 10 | < th | dose independent | rect. | 8 | 8 |
| 32 | 138.22 | temperature | 30 | 10 | < th | dose dependent | rect. | 2 | 18 |
| 41 | 138.42 | temperature | 15 | 10 | > th | dose dependent | rect. | 8 | 8 |
| 43 | 138.50 | temperature | 15 | 10 | > th | dose dependent | rect. | 8 | 17 |
| 44 | 138.50 | humidity | 90 | 10 | < th | dose dependent | rect. | 8 | 17 |
| 53 | 138.71 | radiation | 10 | 270 | > th | dose independent | rect. | 6 | 7 |
| 83 | 138.91 | radiation | 10 | 90 | > th | dose independent | rect. | 8 | 8 |
| 89 | 139.13 | temperature | 10 | 10 | > th | dose dependent | sin | 1 | NA |
| 91 | 139.18 | humidity | 90 | 10 | < th | dose dependent | rect. | 8 | 12 |
| 106 | 139.45 | radiation | 20 | 270 | < th | dose dependent | sin | 4 | NA |
| 108 | 139.51 | humidity | 60 | 10 | > th | dose dependent | sin | 0 | NA |
| 130 | 139.88 | temperature | 30 | 30 | < th | dose dependent | rect. | 5 | 15 |
| 146 | 140.20 | temperature | 30 | 30 | < th | dose dependent | rect. | 5 | 13 |
| 150 | 140.25 | atmosphere | 995 | 14400 | > th | dose independent | rect. | 9 | 5 |
| 154 | 140.29 | wind | 9 | 4320 | < th | dose independent | rect. | 19 | 9 |
| 170 | 140.57 | humidity | 90 | 10 | < th | dose dependent | sin | 0 | NA |
| 176 | 140.62 | radiation | 20 | 270 | < th | dose dependent | rect. | 2 | 15 |
| 285 | 141.43 | temperature | 15 | 10 | > th | dose dependent | rect. | 8 | 21 |
| 287 | 141.47 | humidity | 50 | 270 | > th | dose dependent | rect. | 2 | 15 |
| 349 | 142.08 | radiation | 10 | 270 | > th | dose independent | rect. | 8 | 3 |
| 391 | 142.35 | radiation | 20 | 30 | > th | dose independent | rect. | 8 | 6 |
| 407 | 142.46 | temperature | 15 | 10 | > th | dose dependent | rect. | 8 | 6 |
| 421 | 142.54 | humidity | 60 | 90 | > th | dose dependent | rect. | 5 | 13 |
| 454 | 142.64 | wind | 7 | 4320 | > th | dose dependent | rect. | 19 | 9 |
| 516 | 142.93 | wind | 9 | 4320 | > th | dose independent | rect. | 20 | 8 |
| 517 | 142.94 | wind | 9 | 4320 | < th | dose independent | rect. | 20 | 1 |
| 524 | 142.99 | humidity | 90 | 30 | < th | dose dependent | rect. | 24 | 16 |
| 573 | 143.27 | wind | 7 | 4320 | > th | dose dependent | rect. | 19 | 5 |
| 601 | 143.41 | wind | 9 | 4320 | > th | dose independent | rect. | 20 | 4 |
| 609 | 143.45 | radiation | 1 | 14400 | < th | dose dependent | rect. | 22 | 5 |
| 671 | 143.68 | radiation | 20 | 30 | > th | dose independent | rect. | 15 | 23 |
| 700 | 143.80 | atmosphere | 995 | 14400 | > th | dose independent | rect. | 6 | 15 |
| 711 | 143.86 | radiation | 20 | 270 | < th | dose dependent | rect. | 21 | 22 |
| 753 | 143.99 | humidity | 70 | 90 | > th | dose independent | rect. | 1 | 17 |
| 760 | 144.02 | radiation | 1 | 14400 | < th | dose dependent | rect. | 22 | 3 |
| 778 | 144.12 | wind | 9 | 4320 | > th | dose independent | rect. | 20 | 1 |
| 837 | 144.28 | atmosphere | 995 | 14400 | > th | dose independent | rect. | 18 | 3 |
| 849 | 144.31 | humidity | 70 | 10 | > th | dose independent | rect. | 2 | 16 |
| 850 | 144.31 | radiation | 1 | 30 | > th | dose dependent | rect. | 8 | 8 |
| 874 | 144.40 | radiation | 1 | 30 | > th | dose dependent | rect. | 8 | 11 |
| 899 | 144.47 | radiation | 20 | 270 | < th | dose independent | rect. | 1 | 16 |
| 942 | 144.57 | radiation | 1 | 14400 | < th | dose dependent | rect. | 24 | 3 |
| 951 | 144.59 | wind | 7 | 10 | < th | dose independent | rect. | 8 | 8 |
| 969 | 144.65 | temperature | 30 | 270 | < th | dose independent | rect. | 2 | 15 |