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Os01g0738900

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Transferase family protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 7.57 (0.0303) R2 : 0.541
β1 : 2.32 (0.114) R2dD : 0.458 R2D : 0.244
β2 : -- (--) R2dC : -- R2C : --
β3 : 1.48 (0.0981) R2dE : 0.24 R2E : 0.0874
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.365 (0.0646) R2dN8 : 0.0425 R2N8 : 0.000421
σ : 0.566
deviance : 147.69
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C
peak time of C : --
E
wheather : temperature
threshold : 29.7
memory length : 1801
response mode : < th
dose dependency : dose independent
G
type of G : no
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = < th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
135.48 0.547 7.6 2.06 0.184 1.31 1.54 1.62 0.317 1.01 29.69 1807 -- --
135.85 0.543 7.58 2.36 0.19 1.5 1.52 -- 0.35 0.933 29.6 1812 -- --
145.07 0.561 7.63 1.95 0.205 1.23 -- 2.26 0.287 2.26 29.7 1807 -- --
145.63 0.562 7.59 2.29 0.208 1.51 -- -- 0.272 2.51 29.7 1856 -- --
147.38 0.565 7.61 1.93 -- 1.25 -- 1.85 0.324 -- 29.5 1806 -- --
209.37 0.678 7.56 1.96 0.224 -- 1.46 -- 0.402 2.24 -- -- -- --
215.23 0.687 7.56 1.92 0.31 -- -- -- 0.391 4.79 -- -- -- --
147.69 0.566 7.57 2.32 -- 1.48 -- -- 0.365 -- 29.7 1801 -- --
278.11 0.777 7.61 -- 0.238 1.01 -- -- 0.179 2.69 29.5 1808 -- --
220.33 0.694 7.56 1.93 -- -- -- -- 0.399 -- -- -- -- --
312.38 0.827 7.61 -- 0.346 -- -- -- 0.177 4.63 -- -- -- --
281.72 0.782 7.61 -- -- 1 -- -- 0.201 -- 29.44 1804 -- --
318.74 0.833 7.61 -- -- -- -- -- 0.185 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 140.81 temperature 15 30 > th dose dependent rect. 4 16
2 140.99 temperature 30 1440 < th dose independent rect. 14 22
4 141.04 temperature 30 1440 < th dose independent sin 5 NA
7 141.11 temperature 30 1440 > th dose independent rect. 14 22
11 141.28 temperature 30 1440 < th dose independent rect. 8 8
12 141.28 temperature 30 1440 < th dose independent rect. 1 15
13 141.28 temperature 30 1440 < th dose independent rect. 21 19
16 141.30 temperature 30 1440 < th dose independent rect. 3 13
29 141.45 humidity 70 1440 > th dose independent sin 16 NA
30 141.47 temperature 30 14400 > th dose independent rect. 15 1
33 141.49 temperature 30 1440 < th dose independent rect. 9 3
50 141.58 temperature 30 1440 < th dose independent rect. 21 15
51 141.59 temperature 30 1440 < th dose independent rect. 1 11
57 141.61 temperature 30 1440 < th dose independent rect. 3 9
59 141.61 temperature 30 14400 > th dose independent rect. 15 18
60 141.61 temperature 30 14400 < th dose independent rect. 15 18
82 141.65 temperature 30 14400 > th dose dependent rect. 17 16
94 141.67 humidity 50 1440 > th dose dependent rect. 11 11
99 141.69 temperature 30 1440 > th dose independent sin 5 NA
104 141.71 temperature 30 1440 > th dose independent rect. 9 3
112 141.80 temperature 30 1440 < th dose independent rect. 8 16
114 141.80 temperature 30 1440 < th dose independent rect. 1 23
116 141.81 temperature 30 1440 < th dose independent rect. 8 20
117 141.81 temperature 30 1440 < th dose independent rect. 3 21
131 141.82 temperature 30 1440 < th dose independent rect. 3 19
146 141.83 temperature 30 1440 < th dose independent no NA NA
147 141.83 temperature 30 14400 > th dose independent rect. 15 4
221 141.86 temperature 30 14400 < th dose independent rect. 15 14
222 141.87 temperature 30 14400 < th dose independent rect. 15 4
227 141.88 temperature 30 14400 < th dose independent rect. 15 9
228 141.88 temperature 30 14400 < th dose independent rect. 15 11
231 141.89 temperature 30 14400 < th dose independent rect. 15 7
238 141.91 temperature 30 14400 < th dose independent rect. 15 2
254 141.91 temperature 30 14400 > th dose dependent rect. 17 2
268 141.92 temperature 30 1440 < th dose independent rect. 10 1
271 141.92 temperature 30 1440 > th dose independent rect. 18 22
273 141.93 temperature 30 1440 > th dose independent rect. 8 8
364 142.11 humidity 90 1440 < th dose dependent rect. 11 11
382 142.19 temperature 30 1440 > th dose independent no NA NA
474 142.19 temperature 25 1440 > th dose dependent rect. 6 13
495 142.26 temperature 30 1440 < th dose independent rect. 11 23
561 142.41 temperature 30 14400 > th dose dependent sin 12 NA
566 142.44 temperature 30 14400 > th dose independent sin 12 NA
577 142.50 temperature 30 14400 < th dose independent sin 12 NA
607 142.56 temperature 30 14400 > th dose dependent rect. 14 19
611 142.57 temperature 30 1440 > th dose independent rect. 11 23
614 142.58 humidity 80 1440 < th dose dependent sin 16 NA
626 142.60 temperature 30 14400 > th dose dependent rect. 14 5
655 142.62 temperature 15 270 > th dose dependent rect. 2 16
673 142.66 temperature 25 1440 > th dose dependent sin 0 NA
696 142.77 temperature 25 720 > th dose dependent rect. 18 19
825 143.05 humidity 70 1440 > th dose independent rect. 15 4
893 143.18 temperature 30 1440 > th dose dependent rect. 11 1
904 143.23 humidity 90 1440 < th dose dependent rect. 15 6
906 143.24 humidity 70 1440 > th dose independent rect. 14 15
924 143.27 humidity 70 1440 > th dose independent rect. 14 12
929 143.28 humidity 70 1440 > th dose independent rect. 14 10
935 143.29 humidity 70 1440 > th dose independent rect. 14 6
997 143.36 temperature 25 1440 > th dose dependent rect. 6 3