Os01g0737700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : 3'-5' exonuclease domain containing protein.
FiT-DB / Search/ Help/ Sample detail
|
Os01g0737700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : 3'-5' exonuclease domain containing protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 284.88 | 0.793 | 2.95 | 0.198 | 0.0105 | 0.552 | -0.931 | 2.76 | 0.0343 | 14.2 | 34.59 | 281 | -- | -- |
| 292.41 | 0.796 | 2.96 | 0.172 | 0.0145 | 0.56 | -0.0347 | -- | 0.00166 | 12.7 | 34.63 | 279 | -- | -- |
| 287.23 | 0.789 | 2.94 | 0.178 | 0.0331 | 0.525 | -- | 1.96 | 0.0521 | 12.2 | 34.6 | 280 | -- | -- |
| 292.32 | 0.796 | 2.96 | 0.179 | 0.0216 | 0.551 | -- | -- | 0.0114 | 11.2 | 34.65 | 269 | -- | -- |
| 287.23 | 0.789 | 2.95 | 0.173 | -- | 0.533 | -- | 1.9 | 0.0368 | -- | 34.59 | 281 | -- | -- |
| 296.55 | 0.807 | 2.95 | 0.199 | 0.211 | -- | -0.0189 | -- | 0.0518 | 14.4 | -- | -- | -- | -- |
| 296.55 | 0.806 | 2.95 | 0.199 | 0.211 | -- | -- | -- | 0.0517 | 14.4 | -- | -- | -- | -- |
| 292.34 | 0.796 | 2.96 | 0.174 | -- | 0.562 | -- | -- | 0.00946 | -- | 34.65 | 268 | -- | -- |
| 293.12 | 0.797 | 2.96 | -- | 0.025 | 0.575 | -- | -- | -0.00885 | 7.92 | 34.64 | 268 | -- | -- |
| 299.17 | 0.808 | 2.95 | 0.19 | -- | -- | -- | -- | 0.0465 | -- | -- | -- | -- | -- |
| 297.59 | 0.807 | 2.95 | -- | 0.207 | -- | -- | -- | 0.0296 | 14.4 | -- | -- | -- | -- |
| 293.14 | 0.797 | 2.96 | -- | -- | 0.568 | -- | -- | -0.00946 | -- | 34.64 | 268 | -- | -- |
| 300.12 | 0.809 | 2.95 | -- | -- | -- | -- | -- | 0.0254 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 271.51 | humidity | 90 | 90 | > th | dose independent | rect. | 8 | 1 |
| 3 | 271.69 | wind | 5 | 10 | > th | dose independent | rect. | 10 | 1 |
| 7 | 271.69 | wind | 5 | 10 | > th | dose dependent | rect. | 10 | 1 |
| 11 | 272.00 | wind | 7 | 90 | > th | dose dependent | rect. | 8 | 1 |
| 12 | 272.16 | humidity | 90 | 90 | > th | dose dependent | rect. | 8 | 1 |
| 14 | 272.39 | wind | 7 | 90 | > th | dose independent | rect. | 8 | 1 |
| 36 | 274.43 | wind | 9 | 90 | > th | dose dependent | rect. | 21 | 13 |
| 95 | 280.73 | temperature | 20 | 1440 | > th | dose independent | rect. | 12 | 2 |
| 96 | 280.99 | temperature | 20 | 1440 | < th | dose dependent | rect. | 18 | 2 |
| 103 | 281.34 | humidity | 50 | 90 | < th | dose dependent | rect. | 12 | 2 |
| 122 | 281.50 | atmosphere | 1005 | 90 | > th | dose dependent | rect. | 12 | 5 |
| 123 | 281.51 | temperature | 20 | 720 | < th | dose independent | rect. | 7 | 8 |
| 124 | 281.54 | temperature | 20 | 1440 | < th | dose independent | rect. | 12 | 2 |
| 125 | 281.54 | humidity | 50 | 90 | < th | dose independent | rect. | 11 | 3 |
| 149 | 281.63 | wind | 3 | 270 | > th | dose dependent | rect. | 6 | 1 |
| 197 | 281.84 | temperature | 20 | 1440 | < th | dose dependent | rect. | 12 | 8 |
| 198 | 281.84 | temperature | 20 | 1440 | < th | dose dependent | rect. | 12 | 12 |
| 213 | 281.98 | temperature | 20 | 1440 | < th | dose dependent | rect. | 11 | 2 |
| 225 | 282.10 | atmosphere | 1005 | 10 | < th | dose independent | rect. | 9 | 1 |
| 332 | 282.41 | humidity | 50 | 10 | < th | dose dependent | rect. | 13 | 5 |
| 377 | 282.51 | temperature | 20 | 1440 | < th | dose dependent | sin | 20 | NA |
| 418 | 282.69 | humidity | 50 | 720 | > th | dose independent | rect. | 22 | 16 |
| 419 | 282.69 | atmosphere | 1005 | 90 | > th | dose dependent | rect. | 12 | 2 |
| 423 | 282.72 | temperature | 15 | 720 | > th | dose independent | sin | 2 | NA |
| 425 | 282.80 | temperature | 20 | 720 | < th | dose independent | rect. | 7 | 1 |
| 428 | 282.81 | wind | 3 | 270 | > th | dose independent | rect. | 6 | 1 |
| 434 | 282.86 | humidity | 50 | 10 | < th | dose independent | rect. | 13 | 5 |
| 522 | 283.32 | humidity | 50 | 720 | < th | dose dependent | rect. | 10 | 4 |
| 544 | 283.39 | humidity | 50 | 720 | < th | dose dependent | rect. | 13 | 1 |
| 590 | 283.59 | radiation | 1 | 90 | < th | dose independent | rect. | 13 | 2 |
| 593 | 283.59 | radiation | 1 | 90 | < th | dose dependent | rect. | 13 | 2 |
| 602 | 283.63 | temperature | 20 | 1440 | < th | dose dependent | rect. | 22 | 1 |
| 614 | 283.74 | humidity | 50 | 720 | < th | dose independent | rect. | 13 | 1 |
| 622 | 283.78 | temperature | 20 | 1440 | < th | dose independent | rect. | 5 | 15 |
| 625 | 283.80 | temperature | 20 | 720 | > th | dose independent | rect. | 7 | 9 |
| 631 | 283.82 | temperature | 20 | 720 | > th | dose independent | rect. | 6 | 6 |
| 632 | 283.83 | temperature | 20 | 30 | < th | dose independent | rect. | 8 | 10 |
| 637 | 283.89 | temperature | 20 | 1440 | < th | dose independent | rect. | 9 | 10 |
| 641 | 283.93 | temperature | 20 | 30 | < th | dose dependent | rect. | 12 | 3 |
| 643 | 283.94 | radiation | 1 | 10 | < th | dose independent | rect. | 13 | 1 |
| 651 | 283.94 | temperature | 20 | 30 | < th | dose independent | rect. | 12 | 3 |
| 654 | 283.94 | radiation | 1 | 10 | < th | dose dependent | rect. | 13 | 1 |
| 670 | 283.96 | temperature | 20 | 1440 | > th | dose independent | rect. | 5 | 15 |
| 709 | 284.03 | temperature | 20 | 270 | < th | dose dependent | rect. | 7 | 1 |
| 743 | 284.11 | atmosphere | 1005 | 10 | > th | dose dependent | rect. | 13 | 1 |
| 746 | 284.12 | temperature | 20 | 1440 | < th | dose independent | sin | 23 | NA |
| 750 | 284.14 | radiation | 30 | 270 | > th | dose independent | rect. | 9 | 5 |
| 754 | 284.19 | temperature | 20 | 1440 | > th | dose independent | rect. | 7 | 13 |
| 774 | 284.33 | temperature | 20 | 1440 | > th | dose independent | sin | 23 | NA |
| 807 | 284.42 | temperature | 20 | 1440 | > th | dose independent | rect. | 9 | 10 |
| 817 | 284.47 | humidity | 90 | 1440 | < th | dose independent | rect. | 11 | 2 |
| 820 | 284.49 | radiation | 40 | 90 | > th | dose independent | rect. | 12 | 21 |
| 824 | 284.56 | temperature | 20 | 30 | < th | dose independent | rect. | 8 | 8 |
| 838 | 284.63 | atmosphere | 1015 | 4320 | > th | dose dependent | rect. | 14 | 5 |
| 841 | 284.64 | atmosphere | 1015 | 4320 | > th | dose dependent | rect. | 14 | 7 |
| 851 | 284.69 | humidity | 50 | 720 | > th | dose independent | rect. | 12 | 12 |
| 861 | 284.71 | atmosphere | 1015 | 4320 | > th | dose dependent | rect. | 14 | 3 |
| 874 | 284.82 | radiation | 40 | 90 | > th | dose independent | rect. | 12 | 3 |
| 888 | 284.85 | atmosphere | 1005 | 30 | > th | dose independent | rect. | 1 | 11 |
| 899 | 284.85 | temperature | 25 | 10 | < th | dose dependent | rect. | 14 | 1 |
| 901 | 284.85 | atmosphere | 1015 | 4320 | > th | dose dependent | rect. | 14 | 1 |
| 919 | 284.96 | wind | 9 | 90 | > th | dose independent | rect. | 19 | 15 |
| 926 | 284.98 | atmosphere | 1015 | 4320 | > th | dose independent | rect. | 14 | 6 |
| 927 | 284.98 | humidity | 50 | 720 | > th | dose independent | rect. | 12 | 22 |
| 979 | 285.08 | humidity | 50 | 30 | < th | dose dependent | sin | 7 | NA |
| 984 | 285.10 | humidity | 50 | 720 | > th | dose independent | rect. | 5 | 9 |