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Os01g0735900

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : UDP-glucuronosyl/UDP-glucosyltransferase family protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 8.3 (0.225) R2 : 0.378
β1 : -13.4 (2.08) R2dD : 12.3 R2D : -17.8
β2 : 1.16 (0.11) R2dC : 0.175 R2C : -3.19
β3 : 15 (2.27) R2dE : 22.4 R2E : -27.2
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -150 (21.3) R2dD*E : 37.6 R2D*E : -30.3
γ1 : -0.488 (0.085) R2dN8 : 0.062 R2N8 : -2.7
σ : 0.735
deviance : 248.85
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C
peak time of C : 6.01
E
wheather : temperature
threshold : 30.2
memory length : 768
response mode : > th
dose dependency : dose dependent
G
type of G : rect.
peak or start time of G : 18
open length of G : 8.85

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Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose dependent, type of G = rect.)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
247.8 0.74 8.3 -13.4 1.16 15 -0.675 -150 -0.488 6.12 30.2 762 18 2.12
307.73 0.823 6.71 1.18 0.774 -0.137 -1.61 -- -0.365 6.75 30.2 762 18 2.12
248.85 0.735 8.3 -13.4 1.16 15 -- -150 -0.488 6.01 30.2 768 18 8.85
267.79 0.762 6.71 1.34 1.18 -1.26 -- -- -0.443 5.46 25.76 694 18 5.24
315.24 0.827 8.25 -12.7 -- 14.4 -- -143 -0.447 -- 30.2 809 18 0.926
307.76 0.822 6.71 1.18 0.778 -- -1.6 -- -0.364 6.75 -- -- -- --
314.21 0.83 6.71 1.15 0.775 -- -- -- -0.361 6.57 -- -- -- --
320.21 0.833 6.73 1.28 -- -0.834 -- -- -0.405 -- 26.61 778 16.2 6.58
301.68 0.809 6.73 -- 1.2 -1.45 -- -- -0.609 5.37 25.83 572 20 2.67
345.5 0.869 6.72 1.17 -- -- -- -- -0.345 -- -- -- -- --
349.28 0.874 6.74 -- 0.79 -- -- -- -0.489 6.49 -- -- -- --
359.08 0.883 6.76 -- -- -0.946 -- -- -0.514 -- 25.83 464 22 0.317
381.75 0.912 6.75 -- -- -- -- -- -0.475 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 250.82 temperature 30.0 720 > th dose dependent rect. 18 1
31 262.81 humidity 50.0 1440 < th dose independent rect. 16 1
32 262.83 wind 1.0 90 < th dose dependent rect. 4 1
33 262.90 wind 1.0 90 < th dose independent rect. 4 1
34 262.99 humidity 70.0 720 > th dose independent rect. 19 8
35 263.17 temperature 25.0 720 > th dose dependent rect. 22 1
36 263.68 humidity 50.0 1440 < th dose dependent rect. 16 1
37 264.10 humidity 70.0 720 < th dose independent rect. 19 13
38 264.42 temperature 20.0 90 > th dose dependent rect. 3 2
40 264.76 humidity 70.0 720 < th dose independent rect. 19 1
65 265.62 humidity 70.0 720 < th dose dependent rect. 19 1
77 266.29 humidity 70.0 720 > th dose independent rect. 19 1
81 267.46 humidity 70.0 720 > th dose independent rect. 18 13
82 267.80 temperature 20.0 90 > th dose independent rect. 3 2
84 267.89 temperature 30.0 720 > th dose independent rect. 18 1
110 268.40 humidity 70.0 1440 > th dose independent rect. 19 4
136 269.13 humidity 70.0 720 < th dose dependent rect. 18 14
155 270.00 humidity 90.0 90 > th dose dependent rect. 3 2
159 270.21 wind 1.0 30 < th dose independent rect. 3 3
164 270.44 wind 1.0 30 > th dose independent sin 6 NA
166 270.52 radiation 20.0 14400 < th dose independent rect. 3 3
169 270.77 wind 1.0 30 < th dose independent rect. 24 6
192 271.42 humidity 90.0 30 > th dose independent rect. 4 1
198 271.81 humidity 50.0 1440 > th dose independent rect. 16 1
214 271.99 temperature 25.0 30 < th dose independent rect. 4 1
220 272.11 temperature 30.0 1440 < th dose independent rect. 18 11
222 272.21 temperature 20.0 10 > th dose dependent rect. 3 3
223 272.22 humidity 70.0 720 > th dose independent rect. 15 9
230 272.35 wind 1.0 30 > th dose independent rect. 19 14
231 272.40 humidity 70.0 720 > th dose independent sin 11 NA
249 272.63 wind 1.0 30 < th dose independent rect. 2 12
261 272.81 atmosphere 1010.0 30 < th dose dependent rect. 4 1
262 272.82 wind 1.0 30 < th dose independent rect. 4 10
263 272.84 temperature 30.0 1440 < th dose independent rect. 18 13
270 272.97 temperature 30.0 1440 < th dose independent rect. 18 8
274 273.02 wind 1.0 30 < th dose independent rect. 24 14
281 273.18 wind 3.0 10 < th dose dependent rect. 2 4
283 273.23 wind 1.0 30 < th dose independent rect. 24 9
288 273.35 wind 1.0 30 < th dose independent rect. 2 10
290 273.36 humidity 80.0 720 > th dose independent rect. 21 1
304 273.36 humidity 70.0 1440 > th dose independent rect. 19 17
309 273.44 humidity 80.0 720 > th dose independent rect. 12 10
316 273.53 wind 1.0 30 < th dose independent sin 4 NA
334 273.69 radiation 20.0 1440 < th dose dependent rect. 15 2
339 273.80 humidity 70.0 1440 < th dose independent rect. 18 18
353 273.99 humidity 70.0 720 > th dose dependent rect. 19 3
354 273.99 humidity 50.0 720 > th dose dependent rect. 17 7
361 274.02 temperature 20.0 10 > th dose independent rect. 3 3
386 274.14 radiation 10.0 1440 < th dose dependent rect. 13 5
387 274.17 radiation 10.0 1440 < th dose dependent rect. 13 14
389 274.20 radiation 10.0 1440 < th dose dependent rect. 13 10
390 274.20 radiation 10.0 1440 < th dose dependent rect. 13 12
395 274.26 radiation 10.0 1440 < th dose dependent rect. 13 8
436 274.58 temperature 30.0 1440 < th dose independent rect. 18 2
437 274.60 radiation 1.0 720 > th dose independent rect. 9 10
477 274.74 radiation 10.0 1440 < th dose dependent sin 17 NA
484 274.77 humidity 70.0 720 > th dose independent rect. 15 16
500 274.91 radiation 20.0 1440 < th dose dependent rect. 15 12
503 274.92 radiation 30.0 1440 < th dose dependent rect. 15 8
507 274.94 radiation 20.0 1440 < th dose dependent rect. 15 10
508 274.95 radiation 1.0 1440 > th dose dependent rect. 15 2
517 275.00 radiation 20.0 1440 < th dose dependent rect. 15 6
581 275.40 wind 7.0 4320 > th dose independent rect. 15 1
657 275.78 wind 1.0 10 > th dose independent rect. 23 23
658 275.79 wind 7.0 4320 < th dose independent rect. 15 1
699 276.01 humidity 70.0 1440 > th dose independent rect. 9 2
755 276.33 radiation 10.0 720 > th dose independent rect. 16 1
778 276.44 radiation 10.0 1440 > th dose independent sin 16 NA
786 276.46 humidity 70.0 720 < th dose independent sin 11 NA
815 276.58 radiation 20.0 1440 > th dose independent rect. 16 16
816 276.59 atmosphere 1005.0 30 > th dose independent rect. 4 1
831 276.62 temperature 30.0 30 < th dose dependent rect. 4 1
894 276.78 precipitation 0.1 30 < th dose independent rect. 4 1
895 276.78 precipitation 0.1 30 < th dose dependent rect. 4 1
911 276.88 wind 9.0 30 < th dose independent rect. 4 1
912 276.88 temperature 10.0 30 > th dose independent rect. 4 1
915 276.88 humidity 50.0 30 > th dose independent rect. 4 1
919 276.88 atmosphere 995.0 30 > th dose independent rect. 4 1
920 276.88 atmosphere 1010.0 30 < th dose independent rect. 4 1
922 276.88 radiation 1.0 30 < th dose independent rect. 4 1
927 276.88 temperature 10.0 30 > th dose independent rect. 5 23
932 276.89 radiation 1.0 720 < th dose independent rect. 14 10
933 276.89 radiation 40.0 30 < th dose dependent rect. 4 1
970 277.11 wind 5.0 4320 > th dose dependent rect. 15 1
985 277.24 humidity 70.0 720 > th dose dependent rect. 14 9