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Os01g0735400

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description :


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 9.64 (0.0673) R2 : 0.678
β1 : -5.34 (0.251) R2dD : 0.347 R2D : 0.152
β2 : 2.62 (0.172) R2dC : 0.165 R2C : 0.142
β3 : -4.96 (0.25) R2dE : 0.297 R2E : 0.145
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -1.47 (0.144) R2dN8 : 0.0991 R2N8 : -0.0118
σ : 1.25
deviance : 724.86
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C
peak time of C : 7.59
E
wheather : humidity
threshold : 73
memory length : 1317
response mode : > th
dose dependency : dose independent
G
type of G : rect.
peak or start time of G : 17.5
open length of G : 20.4

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Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = humidity, response mode = > th, dose dependency = dose independent, type of G = rect.)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
720.95 1.26 9.63 -5.04 2.67 -3.91 1.95 -2.52 -1.39 6.66 72 1414 17.5 20.3
721.9 1.25 9.71 -4.96 2.63 -4.34 2.39 -- -1.43 7.3 72.09 1314 17.5 21.1
721.43 1.25 9.59 -4.91 2.7 -4.42 -- -2.36 -1.29 7.16 72.01 1345 17.5 20.4
724.86 1.25 9.64 -5.34 2.62 -4.96 -- -- -1.47 7.59 73 1317 17.5 20.4
1071.79 1.52 9.68 -4.98 -- -4.7 -- -2.77 -1.35 -- 72.24 1348 17.5 20.3
1297.95 1.69 9.62 -4.38 2.84 -- 2.25 -- -1.17 6.37 -- -- -- --
1310.45 1.7 9.62 -4.36 2.85 -- -- -- -1.18 6.33 -- -- -- --
1080.12 1.53 9.74 -5.24 -- -4.62 -- -- -1.41 -- 72.36 1349 17.5 20.3
1378.35 1.73 9.6 -- 4.14 -5.48 -- -- -1.14 7.41 82.35 2201 16.8 21.6
1731.19 1.94 9.68 -4.28 -- -- -- -- -1.12 -- -- -- -- --
1810.43 1.99 9.51 -- 2.79 -- -- -- -0.696 6.42 -- -- -- --
1762.37 1.96 9.68 -- -- -5.19 -- -- -1.17 -- 85.99 1376 17.6 22
2214.43 2.2 9.57 -- -- -- -- -- -0.645 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 760.10 humidity 70 1440 > th dose independent rect. 17 20
11 775.28 humidity 70 1440 < th dose independent rect. 17 20
13 776.64 humidity 80 1440 < th dose dependent rect. 16 20
17 779.73 humidity 70 1440 < th dose independent rect. 15 21
40 790.24 humidity 70 1440 > th dose independent sin 10 NA
46 792.58 humidity 60 1440 > th dose dependent rect. 7 7
47 792.86 humidity 90 1440 < th dose dependent sin 2 NA
52 794.27 humidity 50 1440 > th dose dependent sin 1 NA
54 794.38 humidity 50 1440 > th dose dependent rect. 6 13
55 794.41 humidity 80 1440 < th dose independent rect. 7 7
65 795.74 humidity 90 1440 < th dose dependent rect. 5 15
70 796.17 humidity 70 1440 > th dose independent rect. 8 19
74 796.23 humidity 70 1440 > th dose independent rect. 8 17
78 796.29 humidity 70 1440 > th dose independent rect. 8 12
89 796.55 humidity 90 1440 < th dose dependent rect. 6 8
114 797.18 humidity 70 1440 > th dose independent rect. 23 21
119 797.19 humidity 70 1440 > th dose independent rect. 2 23
130 797.24 humidity 70 1440 > th dose independent no NA NA
135 797.25 humidity 70 1440 > th dose independent rect. 2 18
295 800.81 humidity 80 1440 < th dose dependent no NA NA
330 802.69 humidity 80 1440 > th dose independent rect. 7 7
359 803.75 humidity 70 1440 < th dose independent sin 10 NA
478 808.52 humidity 80 1440 < th dose dependent rect. 11 23
508 809.48 humidity 70 1440 < th dose independent rect. 8 12
546 810.39 humidity 70 1440 < th dose independent no NA NA
652 812.38 humidity 70 1440 > th dose independent sin 0 NA
667 813.07 humidity 60 1440 > th dose dependent rect. 10 3
769 816.84 humidity 70 1440 > th dose independent rect. 9 4
928 824.62 humidity 60 1440 > th dose dependent rect. 11 1
960 826.37 humidity 70 1440 < th dose independent sin 23 NA