Os01g0733200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Heat shock transcription factor 29 (Fragment).
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Os01g0733200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Heat shock transcription factor 29 (Fragment).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = rect.)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 140.78 | 0.557 | 10.3 | 1.06 | 5.76 | -5.37 | -0.145 | 0.548 | -0.102 | 17.4 | 11.07 | 234 | 4.55 | 6.99 |
| 140.9 | 0.553 | 10.3 | 1.06 | 5.76 | -5.27 | -0.199 | -- | -0.122 | 17.5 | 11.4 | 222 | 4.58 | 7.05 |
| 140.18 | 0.551 | 10.3 | 1.08 | 5.74 | -5.31 | -- | 0.67 | -0.109 | 17.5 | 11.64 | 222 | 4.54 | 7.08 |
| 140.97 | 0.553 | 10.3 | 1.06 | 5.76 | -5.27 | -- | -- | -0.125 | 17.5 | 11.51 | 221 | 4.58 | 7.03 |
| 593.86 | 1.13 | 10.2 | 0.946 | -- | -7.21 | -- | 0.878 | -0.0909 | -- | -5.1 | 296 | 0.367 | 10.3 |
| 485.52 | 1.03 | 10.4 | 0.734 | 7.77 | -- | 0.0194 | -- | -0.298 | 19.4 | -- | -- | -- | -- |
| 485.52 | 1.03 | 10.4 | 0.733 | 7.77 | -- | -- | -- | -0.298 | 19.4 | -- | -- | -- | -- |
| 590.12 | 1.13 | 10.1 | 1.12 | -- | -7.18 | -- | -- | -0.0208 | -- | -1.279 | 261 | 0.333 | 10.5 |
| 169.08 | 0.606 | 10.3 | -- | 5.75 | -5.14 | -- | -- | -0.235 | 17.4 | 9.53 | 223 | 4.6 | 7.05 |
| 3707.91 | 2.85 | 10.2 | 0.61 | -- | -- | -- | -- | -0.423 | -- | -- | -- | -- | -- |
| 499.69 | 1.05 | 10.4 | -- | 7.77 | -- | -- | -- | -0.38 | 19.4 | -- | -- | -- | -- |
| 622.73 | 1.16 | 10.2 | -- | -- | -7.03 | -- | -- | -0.129 | -- | -4.243 | 262 | 0.35 | 10.4 |
| 3717.72 | 2.85 | 10.2 | -- | -- | -- | -- | -- | -0.491 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 154.88 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 4 | 7 |
| 11 | 183.09 | temperature | 20.0 | 270 | > th | dose independent | rect. | 5 | 6 |
| 13 | 184.68 | temperature | 15.0 | 10 | > th | dose dependent | rect. | 6 | 7 |
| 63 | 231.37 | radiation | 1.0 | 270 | > th | dose independent | rect. | 18 | 17 |
| 65 | 231.48 | temperature | 15.0 | 270 | > th | dose independent | rect. | 17 | 18 |
| 66 | 231.56 | radiation | 1.0 | 270 | > th | dose independent | rect. | 5 | 6 |
| 68 | 231.75 | temperature | 15.0 | 270 | > th | dose independent | rect. | 6 | 16 |
| 79 | 232.20 | wind | 9.0 | 270 | < th | dose independent | rect. | 17 | 18 |
| 81 | 232.47 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 22 | 16 |
| 83 | 232.81 | temperature | 10.0 | 270 | > th | dose independent | rect. | 11 | 6 |
| 84 | 232.81 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 11 | 6 |
| 90 | 233.40 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 11 | 6 |
| 91 | 233.40 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 11 | 6 |
| 92 | 233.61 | wind | 9.0 | 270 | < th | dose independent | rect. | 11 | 6 |
| 96 | 234.63 | humidity | 50.0 | 270 | > th | dose independent | rect. | 17 | 18 |
| 97 | 234.78 | wind | 1.0 | 270 | > th | dose independent | rect. | 11 | 6 |
| 102 | 235.29 | radiation | 1.0 | 270 | < th | dose independent | rect. | 22 | 16 |
| 109 | 236.95 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 17 | 18 |
| 124 | 240.02 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 17 | 18 |
| 125 | 240.02 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 17 | 18 |
| 132 | 240.58 | temperature | 10.0 | 90 | > th | dose dependent | rect. | 19 | 18 |
| 136 | 241.06 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 11 | 6 |
| 146 | 243.99 | wind | 7.0 | 270 | < th | dose independent | rect. | 5 | 6 |
| 147 | 244.19 | radiation | 1.0 | 270 | > th | dose independent | rect. | 11 | 6 |
| 148 | 244.65 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 5 | 6 |
| 149 | 244.65 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 5 | 6 |
| 153 | 245.65 | radiation | 1.0 | 270 | < th | dose dependent | sin | 7 | NA |
| 154 | 245.82 | radiation | 10.0 | 270 | < th | dose dependent | rect. | 22 | 9 |
| 155 | 245.96 | humidity | 50.0 | 270 | > th | dose independent | rect. | 5 | 6 |
| 157 | 246.03 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 11 | 18 |
| 158 | 246.03 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 11 | 18 |
| 159 | 246.13 | wind | 9.0 | 270 | < th | dose independent | rect. | 11 | 18 |
| 161 | 246.20 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 5 | 6 |
| 162 | 246.20 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 5 | 6 |
| 163 | 246.20 | temperature | 10.0 | 270 | > th | dose independent | rect. | 11 | 18 |
| 173 | 248.43 | temperature | 10.0 | 270 | > th | dose independent | rect. | 22 | 8 |
| 174 | 248.43 | temperature | 30.0 | 270 | < th | dose independent | rect. | 22 | 8 |
| 175 | 248.43 | humidity | 50.0 | 270 | > th | dose independent | rect. | 22 | 8 |
| 178 | 248.43 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 22 | 8 |
| 179 | 248.43 | radiation | 20.0 | 270 | < th | dose independent | rect. | 22 | 8 |
| 183 | 248.45 | wind | 9.0 | 270 | < th | dose independent | rect. | 22 | 8 |
| 185 | 248.57 | wind | 7.0 | 270 | < th | dose independent | rect. | 4 | 8 |
| 188 | 248.92 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 4 | 8 |
| 189 | 248.92 | radiation | 40.0 | 270 | < th | dose dependent | rect. | 22 | 8 |
| 190 | 248.92 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 4 | 8 |
| 193 | 249.52 | radiation | 1.0 | 270 | < th | dose independent | rect. | 22 | 9 |
| 194 | 249.59 | wind | 9.0 | 270 | < th | dose independent | rect. | 12 | 16 |
| 198 | 249.70 | humidity | 90.0 | 90 | < th | dose independent | rect. | 6 | 7 |
| 211 | 250.95 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 22 | 8 |
| 212 | 250.95 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 22 | 8 |
| 213 | 251.11 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 12 | 16 |
| 214 | 251.11 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 12 | 16 |
| 217 | 251.56 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 4 | 8 |
| 218 | 251.56 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 4 | 8 |
| 219 | 251.56 | temperature | 10.0 | 270 | > th | dose independent | rect. | 12 | 16 |
| 237 | 252.80 | wind | 9.0 | 270 | < th | dose independent | rect. | 6 | 16 |
| 239 | 253.03 | humidity | 50.0 | 270 | > th | dose independent | rect. | 4 | 8 |
| 275 | 255.93 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 6 | 16 |
| 280 | 256.34 | radiation | 1.0 | 270 | < th | dose independent | sin | 8 | NA |
| 281 | 256.36 | radiation | 1.0 | 270 | > th | dose independent | sin | 8 | NA |
| 366 | 260.45 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 6 | 16 |
| 367 | 260.45 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 6 | 16 |
| 376 | 261.06 | temperature | 10.0 | 270 | > th | dose independent | rect. | 16 | 8 |
| 377 | 261.06 | radiation | 40.0 | 270 | < th | dose independent | rect. | 16 | 8 |
| 378 | 261.06 | temperature | 10.0 | 270 | > th | dose independent | rect. | 24 | 16 |
| 381 | 261.14 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 24 | 16 |
| 411 | 262.90 | radiation | 40.0 | 270 | < th | dose dependent | rect. | 16 | 7 |
| 430 | 263.94 | wind | 9.0 | 270 | < th | dose independent | rect. | 16 | 8 |
| 434 | 264.32 | wind | 9.0 | 270 | < th | dose independent | rect. | 24 | 16 |
| 449 | 265.10 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 24 | 16 |
| 455 | 265.38 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 11 | 18 |
| 471 | 265.97 | radiation | 1.0 | 270 | > th | dose independent | rect. | 11 | 18 |
| 532 | 267.87 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 24 | 16 |
| 533 | 267.87 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 24 | 16 |
| 573 | 270.20 | wind | 1.0 | 270 | > th | dose independent | rect. | 5 | 6 |
| 589 | 271.19 | wind | 9.0 | 270 | < th | dose dependent | rect. | 22 | 8 |
| 590 | 271.24 | humidity | 90.0 | 270 | < th | dose independent | rect. | 11 | 6 |
| 594 | 271.50 | humidity | 50.0 | 270 | > th | dose dependent | rect. | 22 | 8 |
| 595 | 271.56 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 22 | 8 |
| 604 | 272.06 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 17 | 18 |
| 609 | 272.37 | wind | 9.0 | 270 | < th | dose dependent | rect. | 5 | 6 |
| 613 | 272.75 | wind | 1.0 | 270 | > th | dose independent | rect. | 16 | 8 |
| 630 | 273.30 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 16 | 8 |
| 643 | 273.88 | atmosphere | 995.0 | 270 | > th | dose dependent | rect. | 11 | 6 |
| 667 | 274.66 | radiation | 1.0 | 10 | > th | dose independent | rect. | 6 | 7 |
| 669 | 274.84 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 16 | 8 |
| 670 | 274.84 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 16 | 8 |
| 678 | 275.20 | wind | 9.0 | 10 | < th | dose independent | rect. | 6 | 7 |
| 743 | 277.23 | precipitation | 0.1 | 10 | < th | dose independent | rect. | 6 | 7 |
| 744 | 277.23 | precipitation | 0.1 | 10 | < th | dose dependent | rect. | 6 | 7 |
| 754 | 277.46 | humidity | 50.0 | 270 | > th | dose independent | rect. | 17 | 6 |
| 770 | 277.84 | wind | 9.0 | 10 | < th | dose independent | rect. | 13 | 17 |
| 773 | 278.04 | temperature | 10.0 | 10 | > th | dose independent | rect. | 6 | 7 |
| 775 | 278.04 | atmosphere | 995.0 | 10 | > th | dose independent | rect. | 6 | 7 |
| 776 | 278.04 | atmosphere | 1015.0 | 10 | < th | dose independent | rect. | 6 | 7 |
| 777 | 278.04 | temperature | 10.0 | 10 | > th | dose independent | rect. | 13 | 17 |
| 808 | 278.72 | radiation | 40.0 | 10 | < th | dose independent | rect. | 13 | 17 |
| 817 | 279.03 | wind | 1.0 | 10 | > th | dose independent | rect. | 6 | 7 |
| 829 | 279.35 | temperature | 25.0 | 30 | > th | dose independent | rect. | 20 | 17 |
| 872 | 280.87 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 6 | 16 |
| 886 | 281.00 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 7 | 7 |
| 889 | 281.00 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 7 | 7 |
| 890 | 281.00 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 14 | 17 |
| 941 | 282.84 | humidity | 50.0 | 270 | > th | dose independent | rect. | 11 | 6 |
| 978 | 284.35 | wind | 1.0 | 270 | > th | dose independent | rect. | 11 | 18 |
| 989 | 284.51 | wind | 1.0 | 270 | > th | dose independent | rect. | 12 | 16 |
| 993 | 284.65 | wind | 1.0 | 270 | > th | dose independent | rect. | 17 | 18 |