Os01g0729500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
FiT-DB / Search/ Help/ Sample detail
|
Os01g0729500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Conserved hypothetical protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 81.62 | 0.424 | 8.6 | -1.67 | 0.834 | -2.22 | 0.1 | -0.116 | -0.0166 | 21.4 | 25.44 | 2323 | -- | -- |
| 81.35 | 0.42 | 8.61 | -1.71 | 0.876 | -2.23 | 0.132 | -- | -0.0245 | 21.2 | 25.88 | 2502 | -- | -- |
| 81.4 | 0.42 | 8.61 | -1.71 | 0.872 | -2.22 | -- | -0.00166 | -0.0243 | 21.2 | 25.92 | 2494 | -- | -- |
| 81.39 | 0.42 | 8.61 | -1.72 | 0.873 | -2.23 | -- | -- | -0.0313 | 21.2 | 25.93 | 2501 | -- | -- |
| 117.41 | 0.505 | 8.61 | -1.87 | -- | -2.37 | -- | 0.619 | -0.0751 | -- | 29.36 | 2253 | -- | -- |
| 170.12 | 0.611 | 8.48 | -0.804 | 1 | -- | 0.0341 | -- | 0.549 | 21.9 | -- | -- | -- | -- |
| 170.12 | 0.611 | 8.48 | -0.806 | 1 | -- | -- | -- | 0.549 | 21.9 | -- | -- | -- | -- |
| 117.68 | 0.505 | 8.59 | -1.73 | -- | -2.4 | -- | -- | -0.0603 | -- | 28.38 | 2248 | -- | -- |
| 139.75 | 0.551 | 8.53 | -- | 0.875 | -1.69 | -- | -- | 0.311 | 21.2 | 26.07 | 1120 | -- | -- |
| 230.5 | 0.709 | 8.45 | -0.794 | -- | -- | -- | -- | 0.549 | -- | -- | -- | -- | -- |
| 187.24 | 0.64 | 8.46 | -- | 1 | -- | -- | -- | 0.639 | 21.8 | -- | -- | -- | -- |
| 160.19 | 0.589 | 8.52 | -- | -- | -2.16 | -- | -- | 0.267 | -- | 29.47 | 742 | -- | -- |
| 247.15 | 0.734 | 8.43 | -- | -- | -- | -- | -- | 0.637 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 80.50 | temperature | 25 | 1440 | < th | dose dependent | rect. | 20 | 12 |
| 5 | 80.58 | temperature | 25 | 4320 | < th | dose dependent | rect. | 21 | 3 |
| 6 | 80.58 | temperature | 10 | 1440 | > th | dose dependent | rect. | 21 | 12 |
| 45 | 80.93 | temperature | 25 | 1440 | < th | dose dependent | sin | 10 | NA |
| 73 | 81.17 | temperature | 10 | 1440 | > th | dose dependent | rect. | 1 | 7 |
| 76 | 81.19 | temperature | 30 | 1440 | < th | dose dependent | rect. | 1 | 7 |
| 102 | 81.31 | temperature | 10 | 4320 | > th | dose dependent | rect. | 21 | 3 |
| 118 | 81.42 | temperature | 25 | 1440 | < th | dose dependent | rect. | 21 | 7 |
| 142 | 81.53 | radiation | 10 | 4320 | > th | dose dependent | rect. | 16 | 15 |
| 202 | 81.78 | temperature | 10 | 1440 | > th | dose dependent | sin | 10 | NA |
| 216 | 81.87 | radiation | 10 | 4320 | < th | dose independent | rect. | 16 | 15 |
| 319 | 82.29 | temperature | 25 | 1440 | < th | dose dependent | rect. | 5 | 2 |
| 418 | 82.77 | temperature | 10 | 1440 | > th | dose dependent | rect. | 5 | 2 |
| 712 | 83.91 | temperature | 25 | 1440 | < th | dose dependent | rect. | 3 | 1 |
| 969 | 84.86 | temperature | 20 | 1440 | < th | dose independent | rect. | 5 | 1 |