Os01g0728300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Cytochrome P450 monooxygenase CYP72A5 (Fragment).
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Os01g0728300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Cytochrome P450 monooxygenase CYP72A5 (Fragment).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 97.59 | 0.464 | 9.28 | 2.9 | 0.448 | -1.22 | 0.353 | 1.24 | 0.911 | 23.4 | 20.18 | 925 | -- | -- |
| 99.35 | 0.464 | 9.3 | 2.66 | 0.415 | -1.15 | 0.317 | -- | 0.872 | 23.2 | 20.3 | 925 | -- | -- |
| 98.03 | 0.461 | 9.27 | 2.95 | 0.451 | -1.23 | -- | 1.53 | 0.923 | 23.2 | 20.42 | 910 | -- | -- |
| 99.52 | 0.465 | 9.31 | 2.61 | 0.446 | -1.25 | -- | -- | 0.831 | 22.9 | 18.11 | 853 | -- | -- |
| 102.6 | 0.472 | 9.24 | 3.08 | -- | -1 | -- | 1.66 | 0.961 | -- | 21.2 | 1540 | -- | -- |
| 128.8 | 0.532 | 9.36 | 2.25 | 0.186 | -- | 0.461 | -- | 0.602 | 1.13 | -- | -- | -- | -- |
| 129.68 | 0.533 | 9.36 | 2.24 | 0.186 | -- | -- | -- | 0.6 | 1.01 | -- | -- | -- | -- |
| 104.56 | 0.476 | 9.3 | 2.6 | -- | -0.949 | -- | -- | 0.829 | -- | 19.98 | 1553 | -- | -- |
| 257.59 | 0.748 | 9.41 | -- | 0.256 | -0.432 | -- | -- | 0.411 | 22.7 | 21.69 | 524 | -- | -- |
| 131.82 | 0.536 | 9.35 | 2.24 | -- | -- | -- | -- | 0.604 | -- | -- | -- | -- | -- |
| 261.41 | 0.756 | 9.41 | -- | 0.224 | -- | -- | -- | 0.351 | 1.43 | -- | -- | -- | -- |
| 258.74 | 0.752 | 9.4 | -- | -- | -0.481 | -- | -- | 0.421 | -- | 20.9 | 91 | -- | -- |
| 264.48 | 0.759 | 9.41 | -- | -- | -- | -- | -- | 0.355 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 92.86 | wind | 9 | 43200 | > th | dose dependent | rect. | 18 | 13 |
| 4 | 93.84 | wind | 9 | 43200 | > th | dose dependent | rect. | 18 | 7 |
| 5 | 93.95 | wind | 9 | 43200 | > th | dose independent | rect. | 18 | 3 |
| 7 | 94.02 | wind | 9 | 43200 | > th | dose dependent | rect. | 18 | 5 |
| 9 | 94.16 | wind | 9 | 43200 | < th | dose independent | rect. | 18 | 3 |
| 15 | 94.73 | wind | 9 | 43200 | > th | dose independent | rect. | 18 | 7 |
| 18 | 95.21 | wind | 9 | 43200 | > th | dose independent | rect. | 18 | 13 |
| 21 | 95.33 | temperature | 20 | 1440 | > th | dose dependent | rect. | 15 | 4 |
| 22 | 95.36 | temperature | 20 | 1440 | > th | dose dependent | rect. | 14 | 7 |
| 41 | 95.69 | temperature | 20 | 1440 | > th | dose dependent | rect. | 17 | 1 |
| 44 | 95.71 | temperature | 25 | 1440 | > th | dose independent | rect. | 13 | 8 |
| 46 | 95.72 | temperature | 25 | 1440 | < th | dose independent | rect. | 13 | 8 |
| 58 | 95.91 | temperature | 25 | 1440 | < th | dose independent | rect. | 11 | 11 |
| 99 | 96.31 | temperature | 20 | 1440 | > th | dose dependent | sin | 17 | NA |
| 112 | 96.46 | wind | 9 | 43200 | < th | dose independent | rect. | 18 | 7 |
| 124 | 96.64 | temperature | 30 | 1440 | < th | dose dependent | rect. | 17 | 1 |
| 176 | 97.13 | wind | 9 | 43200 | < th | dose independent | rect. | 18 | 13 |
| 179 | 97.15 | temperature | 30 | 1440 | < th | dose dependent | rect. | 15 | 4 |
| 186 | 97.24 | temperature | 25 | 1440 | < th | dose independent | sin | 19 | NA |
| 206 | 97.35 | temperature | 25 | 1440 | > th | dose independent | sin | 19 | NA |
| 219 | 97.43 | temperature | 20 | 720 | > th | dose dependent | rect. | 12 | 23 |
| 294 | 97.80 | temperature | 20 | 720 | > th | dose dependent | rect. | 21 | 22 |
| 302 | 97.85 | temperature | 10 | 1440 | > th | dose dependent | rect. | 15 | 1 |
| 367 | 98.13 | temperature | 10 | 720 | > th | dose dependent | rect. | 12 | 23 |
| 452 | 98.44 | temperature | 20 | 720 | > th | dose dependent | no | NA | NA |
| 461 | 98.47 | temperature | 20 | 720 | > th | dose dependent | rect. | 16 | 23 |
| 487 | 98.53 | temperature | 20 | 720 | > th | dose dependent | rect. | 1 | 23 |
| 500 | 98.58 | temperature | 20 | 720 | > th | dose dependent | rect. | 3 | 23 |
| 577 | 98.79 | temperature | 20 | 1440 | > th | dose dependent | rect. | 1 | 21 |
| 738 | 99.06 | temperature | 30 | 1440 | < th | dose dependent | sin | 18 | NA |
| 801 | 99.21 | temperature | 25 | 1440 | < th | dose independent | rect. | 3 | 19 |
| 883 | 99.39 | temperature | 25 | 1440 | > th | dose independent | rect. | 3 | 19 |