Os01g0727700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF584 family protein.
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Os01g0727700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein of unknown function DUF584 family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = atmosphere,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 303.79 | 0.819 | 7.41 | 0.133 | 2.53 | 1.23 | -0.518 | 3.68 | 0.0196 | 22.1 | 999.6 | 9368 | -- | -- |
| 318.6 | 0.831 | 7.33 | 0.866 | 2.5 | 1.46 | -0.517 | -- | 0.148 | 22.1 | 994.7 | 10662 | -- | -- |
| 304.84 | 0.813 | 7.41 | 0.157 | 2.53 | 1.23 | -- | 3.66 | 0.0223 | 22.1 | 999.6 | 9346 | -- | -- |
| 319.48 | 0.832 | 7.33 | 0.896 | 2.51 | 1.48 | -- | -- | 0.154 | 22 | 994.8 | 10660 | -- | -- |
| 689.16 | 1.22 | 7.33 | 0.299 | -- | 1.23 | -- | 3.17 | 0.0575 | -- | 999.2 | 10084 | -- | -- |
| 362.65 | 0.893 | 7.33 | 0.538 | 2.51 | -- | -0.537 | -- | 0.149 | 22.1 | -- | -- | -- | -- |
| 363.77 | 0.893 | 7.33 | 0.559 | 2.52 | -- | -- | -- | 0.151 | 22 | -- | -- | -- | -- |
| 698.68 | 1.23 | 7.26 | 0.931 | -- | 1.54 | -- | -- | 0.163 | -- | 994.8 | 11469 | -- | -- |
| 339.35 | 0.858 | 7.35 | -- | 2.52 | 1.23 | -- | -- | 0.0629 | 22.1 | 994.8 | 10712 | -- | -- |
| 745.57 | 1.28 | 7.26 | 0.591 | -- | -- | -- | -- | 0.153 | -- | -- | -- | -- | -- |
| 372.02 | 0.902 | 7.34 | -- | 2.52 | -- | -- | -- | 0.0887 | 22 | -- | -- | -- | -- |
| 720.24 | 1.25 | 7.28 | -- | -- | 1.29 | -- | -- | 0.0646 | -- | 994.7 | 11467 | -- | -- |
| 754.78 | 1.28 | 7.28 | -- | -- | -- | -- | -- | 0.0876 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 304.76 | temperature | 25 | 43200 | > th | dose independent | rect. | 22 | 2 |
| 7 | 305.62 | temperature | 25 | 43200 | < th | dose independent | rect. | 22 | 2 |
| 17 | 306.06 | temperature | 25 | 43200 | > th | dose dependent | rect. | 20 | 1 |
| 131 | 308.60 | humidity | 80 | 43200 | > th | dose dependent | rect. | 13 | 1 |
| 147 | 308.97 | temperature | 30 | 43200 | < th | dose independent | rect. | 13 | 1 |
| 157 | 309.19 | temperature | 30 | 43200 | > th | dose independent | rect. | 13 | 1 |
| 176 | 309.44 | temperature | 25 | 43200 | > th | dose independent | sin | 12 | NA |
| 184 | 309.48 | humidity | 80 | 43200 | > th | dose independent | rect. | 15 | 1 |
| 189 | 309.51 | temperature | 25 | 43200 | > th | dose dependent | sin | 11 | NA |
| 205 | 309.58 | temperature | 25 | 43200 | < th | dose independent | sin | 12 | NA |
| 230 | 309.72 | temperature | 30 | 43200 | < th | dose independent | rect. | 4 | 11 |
| 238 | 309.73 | temperature | 30 | 43200 | < th | dose independent | rect. | 8 | 7 |
| 239 | 309.73 | temperature | 30 | 43200 | < th | dose independent | rect. | 6 | 9 |
| 263 | 309.87 | temperature | 30 | 43200 | > th | dose independent | rect. | 8 | 7 |
| 373 | 310.28 | temperature | 30 | 43200 | < th | dose independent | sin | 4 | NA |
| 411 | 310.36 | atmosphere | 1000 | 4320 | > th | dose dependent | rect. | 12 | 1 |
| 440 | 310.40 | atmosphere | 1000 | 4320 | > th | dose dependent | rect. | 12 | 8 |
| 446 | 310.42 | temperature | 30 | 43200 | > th | dose independent | sin | 4 | NA |
| 506 | 310.51 | atmosphere | 1000 | 4320 | > th | dose dependent | rect. | 12 | 4 |
| 519 | 310.54 | atmosphere | 1015 | 4320 | < th | dose dependent | rect. | 12 | 8 |
| 545 | 310.61 | atmosphere | 995 | 4320 | > th | dose dependent | rect. | 15 | 5 |
| 552 | 310.64 | temperature | 25 | 43200 | > th | dose dependent | rect. | 6 | 5 |
| 572 | 310.67 | atmosphere | 995 | 4320 | > th | dose dependent | rect. | 18 | 1 |
| 600 | 310.71 | temperature | 30 | 43200 | < th | dose independent | rect. | 11 | 23 |
| 634 | 310.75 | temperature | 25 | 43200 | > th | dose dependent | rect. | 7 | 1 |
| 645 | 310.76 | temperature | 25 | 43200 | > th | dose dependent | rect. | 10 | 1 |
| 679 | 310.81 | temperature | 30 | 43200 | > th | dose independent | rect. | 11 | 23 |
| 718 | 310.84 | temperature | 30 | 43200 | < th | dose independent | no | NA | NA |
| 743 | 310.84 | temperature | 30 | 43200 | < th | dose independent | rect. | 8 | 21 |
| 763 | 310.84 | atmosphere | 1000 | 4320 | > th | dose dependent | rect. | 15 | 1 |
| 797 | 310.85 | atmosphere | 1015 | 4320 | < th | dose dependent | rect. | 15 | 1 |
| 865 | 310.90 | temperature | 25 | 43200 | > th | dose dependent | rect. | 6 | 21 |
| 881 | 310.92 | atmosphere | 1015 | 4320 | < th | dose dependent | rect. | 18 | 1 |
| 888 | 310.93 | temperature | 30 | 43200 | > th | dose independent | no | NA | NA |
| 982 | 310.93 | temperature | 25 | 43200 | > th | dose dependent | no | NA | NA |