Os01g0726000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os01g0726000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 34.01 | 0.274 | 10.9 | -0.288 | 0.694 | 0.627 | 0.15 | -1.21 | -0.133 | 14.4 | 18.33 | 33 | -- | -- |
| 34.99 | 0.275 | 10.9 | -0.0826 | 0.689 | 0.617 | -0.221 | -- | -0.0768 | 14.4 | 17.57 | 30 | -- | -- |
| 34.06 | 0.272 | 10.9 | -0.257 | 0.693 | 0.631 | -- | -1.05 | -0.125 | 14.4 | 18.16 | 30 | -- | -- |
| 35.16 | 0.276 | 10.9 | -0.0878 | 0.696 | 0.607 | -- | -- | -0.0762 | 14.4 | 17.47 | 29 | -- | -- |
| 52.54 | 0.338 | 10.9 | -0.422 | -- | 1.29 | -- | -1.14 | -0.254 | -- | 18.52 | 23 | -- | -- |
| 39.71 | 0.295 | 10.9 | 0.0469 | 0.897 | -- | -0.11 | -- | 0.0225 | 14.4 | -- | -- | -- | -- |
| 39.75 | 0.295 | 10.9 | 0.0439 | 0.897 | -- | -- | -- | 0.0219 | 14.4 | -- | -- | -- | -- |
| 53.73 | 0.341 | 10.9 | -0.258 | -- | 1.28 | -- | -- | -0.202 | -- | 18 | 14 | -- | -- |
| 35.35 | 0.277 | 10.9 | -- | 0.709 | 0.567 | -- | -- | -0.0615 | 14.4 | 17.6 | 29 | -- | -- |
| 87.22 | 0.436 | 10.9 | 0.00595 | -- | -- | -- | -- | -0.000304 | -- | -- | -- | -- | -- |
| 39.81 | 0.295 | 10.9 | -- | 0.896 | -- | -- | -- | 0.017 | 14.4 | -- | -- | -- | -- |
| 55.35 | 0.347 | 10.9 | -- | -- | 1.21 | -- | -- | -0.167 | -- | 18.41 | 13 | -- | -- |
| 87.22 | 0.436 | 10.9 | -- | -- | -- | -- | -- | -0.000964 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 33.04 | temperature | 15.0 | 10 | > th | dose dependent | rect. | 6 | 23 |
| 3 | 33.20 | temperature | 15.0 | 30 | > th | dose dependent | rect. | 9 | 17 |
| 8 | 33.34 | temperature | 20.0 | 30 | > th | dose dependent | rect. | 7 | 19 |
| 19 | 33.52 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 9 | 19 |
| 53 | 33.89 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 11 | 22 |
| 79 | 34.10 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 10 | 23 |
| 82 | 34.11 | temperature | 20.0 | 30 | > th | dose dependent | rect. | 3 | 23 |
| 98 | 34.20 | temperature | 20.0 | 30 | > th | dose dependent | no | NA | NA |
| 102 | 34.25 | temperature | 25.0 | 30 | < th | dose independent | rect. | 10 | 23 |
| 103 | 34.25 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 4 | 16 |
| 107 | 34.26 | temperature | 25.0 | 30 | < th | dose independent | rect. | 11 | 21 |
| 116 | 34.29 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 9 | 23 |
| 128 | 34.35 | temperature | 25.0 | 30 | < th | dose independent | rect. | 4 | 17 |
| 139 | 34.39 | temperature | 20.0 | 90 | > th | dose dependent | rect. | 15 | 23 |
| 141 | 34.42 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 13 | 23 |
| 147 | 34.46 | radiation | 10.0 | 43200 | > th | dose independent | rect. | 7 | 2 |
| 150 | 34.46 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 19 | 23 |
| 151 | 34.46 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 21 | 23 |
| 153 | 34.47 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 23 | 23 |
| 160 | 34.49 | radiation | 10.0 | 43200 | < th | dose dependent | rect. | 9 | 1 |
| 181 | 34.50 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 20 | 23 |
| 183 | 34.51 | radiation | 10.0 | 43200 | < th | dose independent | rect. | 10 | 1 |
| 198 | 34.51 | radiation | 20.0 | 43200 | < th | dose dependent | rect. | 11 | 1 |
| 202 | 34.51 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 2 | 22 |
| 232 | 34.54 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 13 | 23 |
| 233 | 34.55 | radiation | 10.0 | 43200 | > th | dose independent | sin | 10 | NA |
| 260 | 34.58 | temperature | 25.0 | 30 | < th | dose independent | rect. | 2 | 22 |
| 266 | 34.58 | radiation | 10.0 | 43200 | < th | dose dependent | rect. | 7 | 7 |
| 287 | 34.62 | temperature | 30.0 | 30 | < th | dose dependent | no | NA | NA |
| 309 | 34.64 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 15 | 23 |
| 328 | 34.66 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 15 | 23 |
| 331 | 34.67 | wind | 1.0 | 14400 | < th | dose dependent | rect. | 21 | 6 |
| 338 | 34.67 | temperature | 20.0 | 30 | > th | dose dependent | rect. | 22 | 23 |
| 415 | 34.73 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 17 | 23 |
| 417 | 34.74 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 19 | 1 |
| 458 | 34.76 | radiation | 20.0 | 43200 | > th | dose independent | rect. | 11 | 1 |
| 460 | 34.76 | atmosphere | 995.0 | 43200 | > th | dose independent | rect. | 20 | 2 |
| 479 | 34.77 | atmosphere | 995.0 | 43200 | < th | dose independent | rect. | 21 | 4 |
| 489 | 34.78 | atmosphere | 995.0 | 43200 | > th | dose independent | rect. | 22 | 1 |
| 490 | 34.78 | atmosphere | 995.0 | 43200 | < th | dose independent | rect. | 21 | 1 |
| 508 | 34.78 | atmosphere | 995.0 | 43200 | < th | dose dependent | rect. | 21 | 1 |
| 554 | 34.79 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 1 | 23 |
| 555 | 34.80 | wind | 1.0 | 43200 | < th | dose independent | rect. | 19 | 1 |
| 558 | 34.80 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 14 | 1 |
| 566 | 34.80 | atmosphere | 995.0 | 43200 | > th | dose independent | rect. | 21 | 12 |
| 570 | 34.80 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 14 | 1 |
| 591 | 34.81 | atmosphere | 995.0 | 43200 | < th | dose independent | rect. | 21 | 12 |
| 595 | 34.81 | radiation | 20.0 | 43200 | < th | dose dependent | sin | 3 | NA |
| 613 | 34.82 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 8 | 1 |
| 634 | 34.83 | atmosphere | 995.0 | 43200 | > th | dose independent | rect. | 6 | 1 |
| 635 | 34.83 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 14 | 1 |
| 644 | 34.83 | temperature | 25.0 | 10 | < th | dose independent | rect. | 4 | 20 |
| 646 | 34.83 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 14 | 1 |
| 652 | 34.84 | humidity | 80.0 | 43200 | < th | dose independent | rect. | 6 | 3 |
| 660 | 34.84 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 21 | 1 |
| 704 | 34.86 | humidity | 80.0 | 43200 | < th | dose independent | rect. | 5 | 5 |
| 719 | 34.87 | humidity | 80.0 | 43200 | > th | dose independent | rect. | 6 | 3 |
| 737 | 34.88 | temperature | 25.0 | 1440 | < th | dose independent | rect. | 20 | 1 |
| 762 | 34.88 | atmosphere | 995.0 | 43200 | < th | dose dependent | rect. | 21 | 11 |
| 963 | 34.92 | radiation | 20.0 | 43200 | < th | dose dependent | rect. | 6 | 21 |
| 974 | 34.93 | radiation | 1.0 | 43200 | > th | dose dependent | rect. | 13 | 1 |