Os01g0725600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Regulator of chromosome condensation/beta-lactamase-inhibitor protein II domain containing protein.
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Os01g0725600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Regulator of chromosome condensation/beta-lactamase-inhibitor protein II domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 33.56 | 0.272 | 6.91 | 0.858 | 0.151 | 0.598 | 0.299 | 0.285 | -0.0871 | 0.97 | 25.42 | 5895 | -- | -- |
| 33.59 | 0.27 | 6.91 | 0.777 | 0.144 | 0.628 | 0.293 | -- | -0.0958 | 0.856 | 25.62 | 5814 | -- | -- |
| 33.93 | 0.271 | 6.91 | 0.851 | 0.151 | 0.601 | -- | 0.293 | -0.0859 | 1.09 | 25.48 | 5902 | -- | -- |
| 33.95 | 0.271 | 6.91 | 0.768 | 0.145 | 0.628 | -- | -- | -0.0999 | 0.888 | 25.62 | 5811 | -- | -- |
| 35.05 | 0.276 | 6.91 | 0.892 | -- | 0.556 | -- | 0.431 | -0.139 | -- | 25 | 6988 | -- | -- |
| 48.35 | 0.326 | 6.9 | 1.02 | 0.169 | -- | 0.376 | -- | -0.0313 | 1.14 | -- | -- | -- | -- |
| 48.94 | 0.328 | 6.9 | 1 | 0.169 | -- | -- | -- | -0.0334 | 1.26 | -- | -- | -- | -- |
| 34.76 | 0.275 | 6.95 | 0.704 | -- | 0.669 | -- | -- | -0.274 | -- | 25.3 | 11241 | -- | -- |
| 36.49 | 0.281 | 7 | -- | 0.138 | 1.07 | -- | -- | -0.485 | 1.95 | 19.08 | 21022 | -- | -- |
| 50.71 | 0.333 | 6.9 | 1.01 | -- | -- | -- | -- | -0.0299 | -- | -- | -- | -- | -- |
| 75.43 | 0.406 | 6.92 | -- | 0.187 | -- | -- | -- | -0.145 | 1.47 | -- | -- | -- | -- |
| 37.47 | 0.285 | 7 | -- | -- | 1.03 | -- | -- | -0.474 | -- | 19.2 | 22697 | -- | -- |
| 77.58 | 0.411 | 6.92 | -- | -- | -- | -- | -- | -0.142 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 32.05 | temperature | 30 | 14400 | < th | dose independent | rect. | 15 | 1 |
| 3 | 32.20 | temperature | 30 | 14400 | > th | dose independent | rect. | 15 | 1 |
| 8 | 32.71 | temperature | 20 | 14400 | > th | dose dependent | rect. | 9 | 1 |
| 9 | 32.73 | temperature | 20 | 14400 | > th | dose dependent | rect. | 12 | 2 |
| 10 | 32.74 | temperature | 20 | 14400 | > th | dose dependent | rect. | 12 | 6 |
| 17 | 32.76 | temperature | 20 | 14400 | > th | dose dependent | rect. | 9 | 10 |
| 34 | 32.80 | temperature | 20 | 14400 | > th | dose dependent | rect. | 17 | 1 |
| 39 | 32.81 | temperature | 25 | 14400 | < th | dose independent | rect. | 7 | 4 |
| 49 | 32.82 | temperature | 20 | 14400 | > th | dose dependent | rect. | 9 | 5 |
| 52 | 32.83 | temperature | 25 | 14400 | < th | dose independent | rect. | 6 | 7 |
| 72 | 32.85 | temperature | 25 | 14400 | > th | dose independent | rect. | 7 | 5 |
| 121 | 32.89 | temperature | 20 | 14400 | > th | dose dependent | sin | 22 | NA |
| 148 | 32.91 | temperature | 30 | 14400 | < th | dose dependent | rect. | 17 | 1 |
| 302 | 33.01 | temperature | 25 | 14400 | > th | dose independent | rect. | 10 | 1 |
| 341 | 33.03 | temperature | 30 | 14400 | < th | dose dependent | rect. | 12 | 8 |
| 409 | 33.06 | temperature | 30 | 14400 | < th | dose dependent | rect. | 9 | 11 |
| 463 | 33.09 | temperature | 25 | 14400 | < th | dose independent | rect. | 4 | 15 |
| 481 | 33.10 | temperature | 25 | 14400 | > th | dose independent | rect. | 4 | 16 |
| 500 | 33.11 | temperature | 25 | 14400 | > th | dose independent | sin | 1 | NA |
| 501 | 33.11 | temperature | 25 | 14400 | < th | dose independent | sin | 1 | NA |
| 503 | 33.11 | temperature | 25 | 14400 | > th | dose independent | rect. | 6 | 14 |
| 510 | 33.11 | temperature | 30 | 14400 | < th | dose dependent | rect. | 9 | 1 |
| 668 | 33.18 | temperature | 30 | 14400 | < th | dose dependent | sin | 21 | NA |
| 779 | 33.23 | humidity | 60 | 14400 | > th | dose dependent | rect. | 18 | 1 |
| 798 | 33.24 | temperature | 25 | 14400 | > th | dose independent | rect. | 10 | 11 |
| 826 | 33.25 | humidity | 90 | 14400 | < th | dose dependent | rect. | 18 | 1 |
| 830 | 33.25 | temperature | 30 | 14400 | < th | dose dependent | rect. | 9 | 5 |
| 905 | 33.28 | temperature | 30 | 14400 | < th | dose dependent | rect. | 12 | 1 |