Os01g0723800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to P-glycoprotein homologue.
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Os01g0723800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to P-glycoprotein homologue.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 141.21 | 0.558 | 10.4 | -0.188 | 1.14 | -0.997 | 0.24 | 2.86 | -0.185 | 23.3 | 26.01 | 1263 | -- | -- |
| 145.97 | 0.563 | 10.4 | -0.851 | 1.2 | -0.731 | 0.597 | -- | -0.213 | 22.9 | 25.61 | 1232 | -- | -- |
| 141.45 | 0.554 | 10.4 | -0.185 | 1.15 | -1.01 | -- | 2.94 | -0.178 | 23.3 | 25.92 | 1247 | -- | -- |
| 143.79 | 0.558 | 10.5 | -0.918 | 1.16 | -0.717 | -- | -- | -0.346 | 23.3 | 26 | 1212 | -- | -- |
| 206.81 | 0.673 | 10.4 | -0.865 | -- | -1.11 | -- | 1.17 | -0.317 | -- | 25.87 | 1504 | -- | -- |
| 163.04 | 0.599 | 10.5 | -1.13 | 1.04 | -- | 0.222 | -- | -0.389 | 23.1 | -- | -- | -- | -- |
| 163.25 | 0.598 | 10.5 | -1.13 | 1.04 | -- | -- | -- | -0.39 | 23.1 | -- | -- | -- | -- |
| 204.55 | 0.669 | 10.5 | -0.972 | -- | -1.04 | -- | -- | -0.322 | -- | 25.3 | 1523 | -- | -- |
| 164.25 | 0.597 | 10.5 | -- | 1.17 | -0.905 | -- | -- | -0.217 | 23.4 | 25.52 | 1231 | -- | -- |
| 230.28 | 0.709 | 10.5 | -1.11 | -- | -- | -- | -- | -0.382 | -- | -- | -- | -- | -- |
| 197.16 | 0.657 | 10.5 | -- | 1.03 | -- | -- | -- | -0.264 | 23.1 | -- | -- | -- | -- |
| 215.17 | 0.683 | 10.4 | -- | -- | -1.03 | -- | -- | 0.109 | -- | 19.29 | 47520 | -- | -- |
| 262.76 | 0.757 | 10.4 | -- | -- | -- | -- | -- | -0.258 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 136.79 | humidity | 70 | 720 | > th | dose dependent | rect. | 19 | 2 |
| 2 | 137.23 | humidity | 50 | 720 | > th | dose dependent | rect. | 16 | 7 |
| 14 | 138.65 | humidity | 90 | 720 | < th | dose dependent | rect. | 16 | 9 |
| 32 | 139.26 | humidity | 50 | 720 | > th | dose dependent | rect. | 16 | 10 |
| 52 | 139.81 | humidity | 50 | 720 | > th | dose dependent | sin | 15 | NA |
| 54 | 139.85 | radiation | 1 | 43200 | > th | dose independent | rect. | 8 | 6 |
| 55 | 139.85 | humidity | 90 | 720 | < th | dose dependent | sin | 14 | NA |
| 57 | 139.87 | radiation | 1 | 43200 | < th | dose independent | rect. | 8 | 6 |
| 62 | 139.96 | humidity | 80 | 720 | < th | dose dependent | sin | 12 | NA |
| 64 | 139.99 | radiation | 1 | 43200 | < th | dose dependent | rect. | 8 | 7 |
| 66 | 140.00 | humidity | 90 | 720 | < th | dose independent | rect. | 21 | 3 |
| 81 | 140.20 | radiation | 1 | 43200 | > th | dose independent | rect. | 9 | 4 |
| 83 | 140.20 | humidity | 50 | 720 | > th | dose dependent | rect. | 15 | 15 |
| 86 | 140.23 | temperature | 25 | 1440 | > th | dose dependent | rect. | 14 | 1 |
| 89 | 140.24 | humidity | 90 | 720 | < th | dose dependent | rect. | 19 | 4 |
| 94 | 140.26 | temperature | 25 | 1440 | > th | dose dependent | rect. | 13 | 3 |
| 108 | 140.37 | radiation | 1 | 43200 | < th | dose dependent | rect. | 6 | 10 |
| 120 | 140.43 | radiation | 1 | 43200 | > th | dose independent | rect. | 9 | 1 |
| 122 | 140.44 | temperature | 20 | 43200 | < th | dose dependent | rect. | 6 | 1 |
| 131 | 140.51 | temperature | 20 | 43200 | < th | dose dependent | rect. | 5 | 3 |
| 133 | 140.53 | radiation | 1 | 43200 | < th | dose independent | rect. | 9 | 1 |
| 134 | 140.53 | temperature | 20 | 43200 | < th | dose dependent | rect. | 2 | 1 |
| 148 | 140.59 | temperature | 20 | 43200 | < th | dose dependent | rect. | 2 | 6 |
| 156 | 140.61 | temperature | 20 | 43200 | < th | dose dependent | rect. | 2 | 9 |
| 199 | 140.69 | temperature | 20 | 43200 | > th | dose independent | rect. | 6 | 2 |
| 216 | 140.71 | temperature | 20 | 43200 | < th | dose independent | rect. | 6 | 2 |
| 217 | 140.71 | temperature | 20 | 43200 | < th | dose dependent | sin | 5 | NA |
| 249 | 140.77 | temperature | 20 | 43200 | < th | dose dependent | rect. | 24 | 1 |
| 258 | 140.78 | temperature | 20 | 43200 | < th | dose dependent | rect. | 24 | 3 |
| 311 | 140.86 | radiation | 10 | 43200 | < th | dose independent | rect. | 18 | 12 |
| 342 | 140.89 | radiation | 10 | 43200 | < th | dose independent | rect. | 24 | 6 |
| 343 | 140.89 | radiation | 1 | 14400 | < th | dose dependent | rect. | 19 | 10 |
| 354 | 140.90 | radiation | 10 | 43200 | < th | dose independent | rect. | 3 | 3 |
| 365 | 140.91 | radiation | 1 | 43200 | < th | dose independent | rect. | 13 | 1 |
| 368 | 140.91 | radiation | 1 | 43200 | < th | dose dependent | rect. | 13 | 1 |
| 388 | 140.93 | radiation | 1 | 43200 | < th | dose dependent | rect. | 6 | 1 |
| 400 | 140.94 | radiation | 40 | 43200 | < th | dose dependent | rect. | 19 | 10 |
| 430 | 140.97 | radiation | 1 | 43200 | > th | dose independent | rect. | 13 | 1 |
| 444 | 140.98 | radiation | 1 | 14400 | < th | dose dependent | rect. | 22 | 7 |
| 516 | 141.03 | temperature | 20 | 43200 | < th | dose dependent | no | NA | NA |
| 525 | 141.04 | temperature | 20 | 43200 | > th | dose independent | rect. | 6 | 9 |
| 528 | 141.04 | temperature | 20 | 43200 | < th | dose independent | rect. | 6 | 10 |
| 549 | 141.05 | temperature | 20 | 43200 | < th | dose dependent | rect. | 2 | 23 |
| 569 | 141.07 | temperature | 20 | 43200 | < th | dose dependent | rect. | 4 | 23 |
| 580 | 141.09 | temperature | 20 | 43200 | > th | dose independent | rect. | 6 | 6 |
| 588 | 141.10 | temperature | 20 | 43200 | < th | dose independent | rect. | 6 | 6 |
| 668 | 141.19 | radiation | 20 | 43200 | < th | dose independent | rect. | 17 | 9 |
| 739 | 141.28 | humidity | 60 | 43200 | < th | dose dependent | rect. | 10 | 1 |
| 741 | 141.29 | radiation | 20 | 43200 | < th | dose independent | rect. | 17 | 6 |
| 753 | 141.30 | radiation | 20 | 43200 | < th | dose independent | rect. | 17 | 4 |
| 762 | 141.31 | radiation | 1 | 43200 | < th | dose dependent | rect. | 6 | 4 |
| 805 | 141.36 | radiation | 10 | 43200 | < th | dose dependent | rect. | 4 | 1 |
| 913 | 141.50 | radiation | 1 | 43200 | > th | dose independent | rect. | 4 | 1 |
| 924 | 141.50 | radiation | 1 | 43200 | > th | dose dependent | rect. | 4 | 1 |
| 949 | 141.51 | temperature | 25 | 1440 | > th | dose dependent | rect. | 13 | 9 |