Os01g0721000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein kinase-like domain containing protein.
FiT-DB / Search/ Help/ Sample detail
|
Os01g0721000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Protein kinase-like domain containing protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 78 | 0.415 | 11.4 | -0.56 | 1.23 | 1.19 | 0.893 | -9.99 | 0.174 | 23.4 | 25.99 | 4152 | -- | -- |
| 98.45 | 0.466 | 11.1 | 1.75 | 1.2 | -0.364 | 0.673 | -- | 0.613 | 23 | 25.99 | 4152 | -- | -- |
| 81.1 | 0.419 | 11.4 | -0.483 | 1.24 | 1.13 | -- | -9.36 | 0.191 | 23.3 | 26.05 | 4266 | -- | -- |
| 91.87 | 0.446 | 11.1 | 2.58 | 1.28 | -0.855 | -- | -- | 0.886 | 23.7 | 32.2 | 47518 | -- | -- |
| 169.61 | 0.607 | 11.4 | -0.798 | -- | 1.49 | -- | -10.2 | 0.0697 | -- | 25.11 | 3578 | -- | -- |
| 100.39 | 0.47 | 11.1 | 1.7 | 1.27 | -- | 0.748 | -- | 0.598 | 23.3 | -- | -- | -- | -- |
| 102.77 | 0.475 | 11.1 | 1.67 | 1.27 | -- | -- | -- | 0.596 | 23.3 | -- | -- | -- | -- |
| 175.14 | 0.616 | 11.2 | 1.4 | -- | 1.2 | -- | -- | 0.403 | -- | 16 | 852 | -- | -- |
| 129.46 | 0.53 | 11.2 | -- | 1.29 | 1.08 | -- | -- | 0.136 | 23.3 | 14.88 | 24844 | -- | -- |
| 203.02 | 0.666 | 11.1 | 1.71 | -- | -- | -- | -- | 0.608 | -- | -- | -- | -- | -- |
| 176.59 | 0.622 | 11.2 | -- | 1.28 | -- | -- | -- | 0.41 | 23.4 | -- | -- | -- | -- |
| 217.72 | 0.687 | 11.2 | -- | -- | 1.86 | -- | -- | 0.179 | -- | 14.5 | 882 | -- | -- |
| 279.73 | 0.781 | 11.2 | -- | -- | -- | -- | -- | 0.419 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 73.21 | wind | 1 | 43200 | < th | dose dependent | rect. | 13 | 13 |
| 6 | 75.21 | temperature | 25 | 4320 | > th | dose dependent | rect. | 17 | 1 |
| 8 | 75.34 | temperature | 25 | 4320 | > th | dose dependent | rect. | 16 | 3 |
| 9 | 75.35 | wind | 1 | 43200 | < th | dose independent | rect. | 24 | 1 |
| 12 | 75.40 | temperature | 25 | 4320 | > th | dose dependent | rect. | 16 | 9 |
| 15 | 75.43 | humidity | 80 | 43200 | < th | dose dependent | rect. | 10 | 1 |
| 28 | 75.57 | wind | 1 | 43200 | < th | dose dependent | sin | 17 | NA |
| 32 | 75.71 | humidity | 70 | 43200 | < th | dose independent | rect. | 5 | 9 |
| 36 | 75.77 | radiation | 10 | 43200 | < th | dose independent | rect. | 13 | 1 |
| 48 | 75.88 | humidity | 70 | 43200 | > th | dose independent | rect. | 6 | 8 |
| 52 | 75.95 | humidity | 70 | 43200 | < th | dose independent | sin | 2 | NA |
| 74 | 76.02 | radiation | 10 | 43200 | > th | dose independent | rect. | 6 | 1 |
| 96 | 76.06 | radiation | 10 | 43200 | > th | dose independent | rect. | 17 | 16 |
| 101 | 76.09 | wind | 1 | 43200 | > th | dose independent | rect. | 24 | 1 |
| 147 | 76.17 | radiation | 10 | 43200 | > th | dose independent | sin | 9 | NA |
| 154 | 76.19 | humidity | 60 | 43200 | > th | dose independent | rect. | 12 | 1 |
| 176 | 76.27 | humidity | 60 | 43200 | > th | dose independent | rect. | 11 | 3 |
| 199 | 76.34 | humidity | 70 | 43200 | < th | dose independent | rect. | 10 | 1 |
| 219 | 76.38 | humidity | 80 | 43200 | > th | dose independent | rect. | 20 | 2 |
| 244 | 76.45 | humidity | 70 | 43200 | > th | dose independent | sin | 2 | NA |
| 245 | 76.45 | humidity | 80 | 43200 | > th | dose independent | rect. | 19 | 4 |
| 250 | 76.47 | humidity | 70 | 43200 | > th | dose independent | rect. | 9 | 1 |
| 267 | 76.47 | wind | 1 | 43200 | < th | dose dependent | rect. | 24 | 1 |
| 273 | 76.48 | temperature | 25 | 4320 | > th | dose dependent | sin | 13 | NA |
| 292 | 76.53 | wind | 1 | 43200 | < th | dose independent | rect. | 17 | 9 |
| 297 | 76.54 | humidity | 80 | 43200 | < th | dose independent | rect. | 19 | 3 |
| 309 | 76.56 | humidity | 70 | 43200 | > th | dose independent | rect. | 5 | 15 |
| 313 | 76.57 | radiation | 20 | 43200 | > th | dose independent | rect. | 8 | 6 |
| 342 | 76.59 | humidity | 60 | 43200 | > th | dose independent | rect. | 20 | 19 |
| 351 | 76.60 | humidity | 70 | 43200 | < th | dose independent | rect. | 16 | 22 |
| 357 | 76.61 | humidity | 80 | 43200 | < th | dose dependent | sin | 4 | NA |
| 391 | 76.64 | humidity | 80 | 43200 | < th | dose dependent | rect. | 19 | 19 |
| 466 | 76.72 | radiation | 20 | 43200 | < th | dose dependent | rect. | 8 | 6 |
| 523 | 76.81 | humidity | 80 | 43200 | < th | dose independent | rect. | 20 | 1 |
| 566 | 76.85 | radiation | 20 | 43200 | < th | dose dependent | rect. | 10 | 4 |
| 587 | 76.88 | radiation | 20 | 43200 | > th | dose independent | rect. | 10 | 1 |
| 600 | 76.89 | radiation | 30 | 43200 | < th | dose dependent | rect. | 13 | 1 |
| 623 | 76.92 | wind | 1 | 43200 | > th | dose independent | rect. | 17 | 9 |
| 642 | 76.93 | humidity | 70 | 43200 | > th | dose independent | rect. | 17 | 20 |
| 644 | 76.93 | radiation | 20 | 43200 | < th | dose dependent | rect. | 10 | 1 |
| 672 | 76.97 | humidity | 70 | 43200 | < th | dose independent | no | NA | NA |
| 686 | 76.99 | humidity | 70 | 43200 | < th | dose independent | rect. | 19 | 23 |
| 729 | 77.05 | humidity | 70 | 43200 | < th | dose independent | rect. | 12 | 23 |
| 768 | 77.07 | radiation | 20 | 43200 | < th | dose dependent | rect. | 8 | 3 |
| 771 | 77.07 | humidity | 70 | 43200 | < th | dose dependent | rect. | 10 | 19 |
| 825 | 77.11 | humidity | 80 | 43200 | < th | dose dependent | rect. | 8 | 15 |
| 881 | 77.17 | humidity | 80 | 43200 | < th | dose dependent | rect. | 19 | 1 |
| 956 | 77.22 | temperature | 25 | 4320 | > th | dose independent | rect. | 17 | 2 |
| 962 | 77.22 | humidity | 50 | 43200 | > th | dose dependent | rect. | 10 | 1 |