Os01g0719400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
FiT-DB / Search/ Help/ Sample detail
|
Os01g0719400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Conserved hypothetical protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose dependent, type of G = sin)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 200.66 | 0.666 | 4.75 | -1.52 | 1.83 | -2.52 | -0.626 | 1.9 | 0.397 | 9.42 | 2.716 | 224 | 21.3 | -- |
| 206.7 | 0.67 | 4.74 | -1.57 | 1.8 | -2.38 | -0.37 | -- | 0.414 | 9.6 | 2.31 | 224 | 21 | -- |
| 201.96 | 0.662 | 4.75 | -1.55 | 1.82 | -2.49 | -- | 1.71 | 0.401 | 9.52 | 2.592 | 224 | 21.1 | -- |
| 207.06 | 0.67 | 4.75 | -1.58 | 1.8 | -2.45 | -- | -- | 0.394 | 9.55 | 2.45 | 224 | 21 | -- |
| 293.21 | 0.798 | 4.81 | -1.51 | -- | -1.75 | -- | 0.353 | 0.315 | -- | 18.49 | 95 | 4.72 | -- |
| 295.1 | 0.805 | 4.77 | -1.47 | 1.81 | -- | -0.293 | -- | 0.42 | 12.8 | -- | -- | -- | -- |
| 295.47 | 0.805 | 4.77 | -1.48 | 1.81 | -- | -- | -- | 0.419 | 12.8 | -- | -- | -- | -- |
| 291.29 | 0.795 | 4.8 | -1.48 | -- | -1.73 | -- | -- | 0.395 | -- | 33.17 | 95 | 5.21 | -- |
| 268.57 | 0.763 | 4.72 | -- | 1.92 | -2.55 | -- | -- | 0.557 | 9.15 | 8.887 | 176 | 21.9 | -- |
| 500.46 | 1.05 | 4.8 | -1.54 | -- | -- | -- | -- | 0.385 | -- | -- | -- | -- | -- |
| 352.91 | 0.879 | 4.73 | -- | 1.84 | -- | -- | -- | 0.583 | 12.9 | -- | -- | -- | -- |
| 348.93 | 0.87 | 4.76 | -- | -- | -1.76 | -- | -- | 0.555 | -- | 33.17 | 91 | 5.15 | -- |
| 563.24 | 1.11 | 4.76 | -- | -- | -- | -- | -- | 0.556 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 204.66 | radiation | 1.0 | 270 | < th | dose dependent | sin | 3 | NA |
| 3 | 205.89 | humidity | 70.0 | 30 | > th | dose dependent | sin | 3 | NA |
| 4 | 205.93 | humidity | 80.0 | 30 | > th | dose dependent | sin | 1 | NA |
| 7 | 207.16 | temperature | 15.0 | 270 | > th | dose independent | rect. | 6 | 19 |
| 11 | 208.49 | temperature | 20.0 | 30 | > th | dose independent | rect. | 7 | 5 |
| 14 | 208.85 | radiation | 1.0 | 270 | < th | dose independent | sin | 4 | NA |
| 15 | 208.96 | radiation | 1.0 | 270 | > th | dose independent | sin | 4 | NA |
| 17 | 209.79 | humidity | 90.0 | 10 | < th | dose independent | rect. | 7 | 5 |
| 20 | 210.02 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 7 | 20 |
| 26 | 210.72 | humidity | 70.0 | 90 | > th | dose dependent | rect. | 3 | 14 |
| 28 | 211.09 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 1 | 13 |
| 42 | 212.19 | radiation | 1.0 | 270 | < th | dose independent | rect. | 1 | 13 |
| 49 | 212.30 | humidity | 80.0 | 90 | > th | dose dependent | rect. | 3 | 16 |
| 92 | 215.01 | humidity | 90.0 | 10 | < th | dose independent | rect. | 7 | 7 |
| 108 | 215.89 | temperature | 15.0 | 10 | > th | dose dependent | rect. | 7 | 5 |
| 144 | 217.60 | humidity | 80.0 | 30 | > th | dose independent | rect. | 3 | 13 |
| 192 | 219.32 | temperature | 15.0 | 270 | > th | dose independent | rect. | 20 | 15 |
| 231 | 220.47 | temperature | 20.0 | 90 | > th | dose independent | rect. | 7 | 8 |
| 239 | 220.61 | radiation | 1.0 | 270 | > th | dose independent | rect. | 6 | 5 |
| 275 | 221.51 | humidity | 90.0 | 90 | < th | dose independent | sin | 2 | NA |
| 280 | 221.54 | wind | 9.0 | 270 | < th | dose dependent | rect. | 6 | 5 |
| 310 | 222.13 | temperature | 15.0 | 270 | > th | dose independent | rect. | 5 | 9 |
| 373 | 223.56 | humidity | 80.0 | 30 | > th | dose independent | sin | 3 | NA |
| 376 | 223.62 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 6 | 19 |
| 377 | 223.62 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 6 | 19 |
| 408 | 224.22 | wind | 7.0 | 10 | < th | dose independent | rect. | 7 | 5 |
| 427 | 224.42 | radiation | 10.0 | 270 | < th | dose dependent | rect. | 1 | 5 |
| 436 | 224.62 | wind | 7.0 | 270 | < th | dose independent | rect. | 1 | 5 |
| 437 | 224.62 | wind | 9.0 | 270 | < th | dose independent | rect. | 6 | 19 |
| 438 | 224.64 | radiation | 1.0 | 270 | > th | dose independent | rect. | 17 | 22 |
| 456 | 224.89 | radiation | 10.0 | 270 | < th | dose independent | rect. | 1 | 5 |
| 458 | 224.92 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 1 | 5 |
| 461 | 224.92 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 1 | 5 |
| 463 | 224.95 | wind | 1.0 | 270 | > th | dose independent | rect. | 1 | 5 |
| 466 | 224.99 | radiation | 1.0 | 270 | > th | dose independent | rect. | 7 | 3 |
| 474 | 225.04 | atmosphere | 1010.0 | 270 | < th | dose independent | rect. | 1 | 5 |
| 475 | 225.04 | radiation | 20.0 | 90 | < th | dose dependent | sin | 4 | NA |
| 494 | 225.22 | temperature | 10.0 | 270 | > th | dose independent | rect. | 1 | 5 |
| 496 | 225.22 | temperature | 30.0 | 270 | < th | dose independent | rect. | 1 | 5 |
| 497 | 225.22 | humidity | 50.0 | 270 | > th | dose independent | rect. | 1 | 5 |
| 500 | 225.22 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 1 | 5 |
| 548 | 225.61 | wind | 1.0 | 270 | > th | dose independent | rect. | 10 | 10 |
| 573 | 225.95 | temperature | 15.0 | 10 | > th | dose dependent | rect. | 21 | 15 |
| 603 | 226.53 | humidity | 90.0 | 30 | < th | dose independent | rect. | 7 | 18 |
| 606 | 226.55 | radiation | 20.0 | 90 | < th | dose dependent | rect. | 3 | 14 |
| 614 | 226.63 | humidity | 90.0 | 90 | < th | dose independent | rect. | 20 | 16 |
| 618 | 226.69 | humidity | 90.0 | 10 | < th | dose dependent | sin | 5 | NA |
| 636 | 226.80 | wind | 7.0 | 270 | < th | dose independent | rect. | 6 | 5 |
| 638 | 226.80 | wind | 9.0 | 10 | < th | dose dependent | rect. | 7 | 5 |
| 642 | 226.84 | humidity | 90.0 | 10 | < th | dose dependent | rect. | 7 | 5 |
| 655 | 226.99 | radiation | 20.0 | 90 | < th | dose dependent | rect. | 3 | 12 |
| 715 | 227.73 | humidity | 90.0 | 10 | < th | dose dependent | rect. | 21 | 15 |
| 745 | 227.91 | wind | 9.0 | 270 | < th | dose dependent | rect. | 7 | 3 |
| 764 | 228.07 | radiation | 10.0 | 10 | > th | dose independent | sin | 3 | NA |
| 806 | 228.32 | radiation | 1.0 | 270 | < th | dose independent | rect. | 22 | 22 |
| 937 | 229.27 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 6 | 19 |
| 947 | 229.38 | radiation | 10.0 | 10 | > th | dose independent | rect. | 7 | 5 |
| 976 | 229.68 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 3 | 17 |