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Os01g0719300

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to Sulfate transporter 3.1 (AST12) (AtST1).


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 7.47 (0.067) R2 : 0.514
β1 : 1.35 (0.259) R2dD : 0.0487 R2D : -0.0426
β2 : 1.46 (0.144) R2dC : 0.11 R2C : 0.0636
β3 : -6.76 (0.587) R2dE : 0.959 R2E : -1.57
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -21.8 (1.41) R2dD*E : 1.54 R2D*E : -0.313
γ1 : 1.23 (0.131) R2dN8 : 0.152 R2N8 : -0.0242
σ : 1.04
deviance : 500.07
__
_____
C
peak time of C : 4.84
E
wheather : radiation
threshold : 30
memory length : 4321
response mode : < th
dose dependency : dose independent
G
type of G : rect.
peak or start time of G : 24
open length of G : 8

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Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = < th, dose dependency = dose independent, type of G = rect.)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
499.49 1.05 7.47 1.35 1.46 -6.77 0.479 -21.9 1.23 4.89 30 4321 24 8
775.64 1.31 6.88 0.943 0.648 0.677 0.358 -- 1.27 5.87 30 4321 24 8
500.07 1.04 7.47 1.35 1.46 -6.76 -- -21.8 1.23 4.84 30 4321 24 8
762.97 1.29 6.88 1.07 0.832 0.669 -- -- 1.29 5.43 54.45 33309 1.21 6.27
566.2 1.11 7.46 1.47 -- -6.98 -- -22.1 1.3 -- 30 4316 24 7.98
782.24 1.31 6.87 0.964 1.37 -- -0.122 -- 1.3 4.73 -- -- -- --
782.28 1.31 6.87 0.965 1.37 -- -- -- 1.3 4.75 -- -- -- --
719.4 1.25 6.75 0.999 -- 1.19 -- -- 1.44 -- 11.58 47520 1.49 7.46
754.96 1.28 6.88 -- 0.833 0.67 -- -- 1.29 5.38 54.7 36016 1.27 8.63
882.17 1.39 6.88 1.02 -- -- -- -- 1.33 -- -- -- -- --
806.81 1.33 6.9 -- 1.39 -- -- -- 1.19 4.73 -- -- -- --
593.63 1.13 6.85 -- -- 3.27 -- -- 1.2 -- 14.89 47520 0.333 10.4
909.43 1.41 6.91 -- -- -- -- -- 1.22 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 425.13 wind 3 43200 < th dose dependent rect. 9 1
3 440.29 humidity 80 43200 < th dose independent rect. 21 3
4 441.14 humidity 80 43200 > th dose independent rect. 21 2
13 443.80 humidity 80 43200 > th dose independent rect. 21 7
20 447.43 humidity 80 43200 < th dose dependent rect. 21 9
23 448.36 wind 1 43200 < th dose dependent rect. 24 2
37 452.43 humidity 80 43200 < th dose independent rect. 4 1
47 453.95 humidity 80 43200 < th dose dependent rect. 3 1
51 454.60 humidity 80 43200 < th dose dependent rect. 1 1
80 457.78 wind 5 14400 > th dose independent rect. 5 11
81 457.91 humidity 80 43200 > th dose independent rect. 3 1
85 458.08 wind 5 14400 < th dose independent rect. 5 11
86 458.09 wind 1 43200 < th dose independent rect. 24 2
108 459.87 wind 5 43200 > th dose dependent rect. 15 1
123 461.43 wind 5 14400 > th dose dependent rect. 5 11
128 462.34 humidity 80 43200 > th dose independent rect. 1 4
171 466.96 wind 3 43200 > th dose dependent rect. 13 18
186 468.16 wind 9 43200 < th dose dependent rect. 8 9
189 468.29 wind 9 43200 < th dose dependent rect. 9 19
194 468.68 wind 5 14400 > th dose dependent rect. 24 16
197 468.89 wind 1 43200 > th dose dependent rect. 9 19
201 468.98 wind 3 43200 < th dose independent rect. 9 1
207 469.27 wind 5 43200 < th dose dependent rect. 8 7
210 469.38 wind 1 43200 > th dose dependent rect. 8 9
223 470.04 wind 9 43200 < th dose dependent rect. 8 16
225 470.08 wind 9 43200 < th dose dependent rect. 6 11
247 470.91 wind 1 43200 > th dose dependent rect. 6 11
248 470.91 wind 9 43200 < th dose dependent rect. 6 17
252 471.02 wind 1 43200 > th dose dependent rect. 8 16
260 471.17 wind 1 43200 > th dose independent rect. 8 3
261 471.18 wind 3 43200 < th dose independent rect. 20 2
277 471.73 wind 1 43200 > th dose dependent rect. 6 17
290 471.92 wind 9 43200 < th dose dependent sin 23 NA
317 472.37 wind 1 43200 > th dose dependent sin 23 NA
322 472.53 wind 3 43200 > th dose independent rect. 20 2
329 472.69 wind 3 43200 > th dose independent rect. 20 21
354 473.19 wind 5 14400 < th dose independent sin 2 NA
379 473.71 wind 5 14400 > th dose independent sin 2 NA
399 474.18 wind 3 43200 > th dose independent rect. 9 1
438 474.76 wind 3 43200 > th dose dependent sin 16 NA
451 475.03 wind 1 43200 < th dose dependent rect. 8 20
486 475.69 wind 3 43200 < th dose independent rect. 9 5
500 475.90 wind 5 43200 < th dose independent rect. 14 15
571 476.84 wind 5 14400 > th dose dependent sin 2 NA
590 477.10 wind 9 43200 < th dose dependent rect. 19 23
646 477.79 wind 3 43200 < th dose independent rect. 20 21
647 477.80 wind 7 14400 > th dose independent rect. 20 20
650 477.83 wind 1 43200 > th dose dependent rect. 19 23
656 477.91 wind 9 43200 < th dose dependent rect. 13 23
658 477.92 wind 5 43200 > th dose independent rect. 14 14
683 478.23 wind 9 43200 < th dose dependent no NA NA
686 478.24 wind 7 14400 < th dose independent rect. 20 20
718 478.77 wind 3 43200 > th dose independent rect. 2 21
735 478.91 wind 1 43200 > th dose dependent no NA NA
788 479.48 wind 5 14400 > th dose dependent rect. 20 20
919 481.23 wind 3 43200 > th dose independent rect. 8 23
955 481.63 wind 9 43200 < th dose dependent sin 16 NA
956 481.65 wind 3 43200 > th dose independent rect. 8 21
962 481.70 wind 3 43200 > th dose independent rect. 16 23