Os01g0718300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Systemin receptor SR160 precursor (EC 2.7.1.37) (Brassinosteroid LRR receptor kinase).
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Os01g0718300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Systemin receptor SR160 precursor (EC 2.7.1.37) (Brassinosteroid LRR receptor kinase).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 73.72 | 0.403 | 9.03 | -0.0199 | 0.509 | 1.03 | -0.248 | 1.43 | 0.996 | 9.85 | 28.8 | 278 | -- | -- |
| 75.97 | 0.406 | 9.01 | 0.249 | 0.504 | 1.04 | -0.305 | -- | 1.05 | 9.99 | 29.92 | 278 | -- | -- |
| 73.94 | 0.4 | 9.03 | -0.0324 | 0.514 | 1.02 | -- | 1.46 | 0.993 | 9.85 | 28.78 | 267 | -- | -- |
| 76.3 | 0.407 | 9 | 0.225 | 0.502 | 1.02 | -- | -- | 1.06 | 9.82 | 29.69 | 284 | -- | -- |
| 84.75 | 0.429 | 9.03 | 0.0962 | -- | 1.26 | -- | 1.04 | 1.06 | -- | 29.42 | 510 | -- | -- |
| 89.82 | 0.444 | 9.05 | -0.0291 | 0.643 | -- | -0.016 | -- | 0.849 | 7.96 | -- | -- | -- | -- |
| 89.82 | 0.444 | 9.05 | -0.0295 | 0.643 | -- | -- | -- | 0.849 | 7.96 | -- | -- | -- | -- |
| 85.73 | 0.431 | 9.01 | 0.294 | -- | 1.26 | -- | -- | 1.1 | -- | 30.05 | 540 | -- | -- |
| 77.5 | 0.41 | 9.01 | -- | 0.525 | 0.927 | -- | -- | 1.01 | 9.66 | 29.76 | 274 | -- | -- |
| 112.36 | 0.495 | 9.06 | -0.0229 | -- | -- | -- | -- | 0.857 | -- | -- | -- | -- | -- |
| 89.84 | 0.443 | 9.05 | -- | 0.643 | -- | -- | -- | 0.852 | 7.96 | -- | -- | -- | -- |
| 87.79 | 0.436 | 9.02 | -- | -- | 1.16 | -- | -- | 1.05 | -- | 30.2 | 520 | -- | -- |
| 112.37 | 0.495 | 9.06 | -- | -- | -- | -- | -- | 0.86 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 71.03 | temperature | 10 | 270 | > th | dose dependent | rect. | 7 | 21 |
| 6 | 71.93 | temperature | 20 | 270 | > th | dose dependent | rect. | 22 | 16 |
| 7 | 72.07 | temperature | 20 | 270 | > th | dose dependent | rect. | 21 | 18 |
| 14 | 72.26 | temperature | 30 | 270 | < th | dose dependent | rect. | 1 | 22 |
| 16 | 72.29 | temperature | 20 | 270 | > th | dose dependent | rect. | 17 | 22 |
| 18 | 72.32 | temperature | 15 | 30 | > th | dose dependent | rect. | 9 | 21 |
| 32 | 72.63 | temperature | 30 | 270 | < th | dose dependent | rect. | 14 | 20 |
| 42 | 72.88 | temperature | 20 | 270 | > th | dose dependent | sin | 7 | NA |
| 85 | 73.39 | temperature | 30 | 270 | < th | dose dependent | rect. | 3 | 19 |
| 146 | 73.96 | temperature | 30 | 270 | < th | dose dependent | no | NA | NA |
| 182 | 74.32 | temperature | 30 | 270 | < th | dose dependent | sin | 5 | NA |
| 300 | 75.23 | temperature | 30 | 270 | < th | dose dependent | rect. | 3 | 7 |
| 361 | 75.65 | temperature | 25 | 270 | < th | dose independent | rect. | 15 | 20 |
| 365 | 75.67 | temperature | 25 | 270 | > th | dose independent | rect. | 21 | 21 |
| 375 | 75.71 | temperature | 20 | 1440 | > th | dose dependent | rect. | 23 | 1 |
| 410 | 75.89 | wind | 9 | 14400 | > th | dose independent | rect. | 4 | 10 |
| 422 | 75.96 | temperature | 25 | 270 | > th | dose independent | rect. | 22 | 18 |
| 462 | 76.06 | temperature | 10 | 270 | > th | dose dependent | no | NA | NA |
| 486 | 76.13 | temperature | 15 | 10 | > th | dose dependent | rect. | 23 | 23 |
| 489 | 76.14 | atmosphere | 995 | 90 | > th | dose dependent | rect. | 5 | 18 |
| 498 | 76.18 | temperature | 25 | 270 | < th | dose independent | rect. | 1 | 23 |
| 512 | 76.21 | temperature | 25 | 270 | > th | dose independent | rect. | 8 | 21 |
| 517 | 76.21 | temperature | 30 | 10 | < th | dose dependent | rect. | 5 | 19 |
| 559 | 76.32 | wind | 9 | 14400 | > th | dose independent | rect. | 10 | 4 |
| 570 | 76.35 | atmosphere | 1000 | 90 | > th | dose independent | rect. | 5 | 18 |
| 634 | 76.51 | wind | 9 | 14400 | > th | dose dependent | rect. | 11 | 2 |
| 644 | 76.53 | temperature | 30 | 1440 | < th | dose dependent | rect. | 23 | 1 |
| 645 | 76.53 | radiation | 1 | 4320 | < th | dose dependent | rect. | 17 | 1 |
| 664 | 76.58 | atmosphere | 1000 | 270 | > th | dose independent | rect. | 3 | 19 |
| 666 | 76.58 | temperature | 20 | 30 | > th | dose dependent | rect. | 17 | 23 |
| 668 | 76.59 | temperature | 10 | 1440 | > th | dose dependent | rect. | 23 | 1 |
| 669 | 76.59 | temperature | 30 | 270 | < th | dose dependent | rect. | 3 | 12 |
| 672 | 76.60 | wind | 9 | 14400 | > th | dose dependent | rect. | 4 | 10 |
| 683 | 76.62 | wind | 9 | 14400 | > th | dose dependent | rect. | 4 | 13 |
| 721 | 76.69 | temperature | 25 | 1440 | < th | dose dependent | rect. | 18 | 6 |
| 759 | 76.75 | temperature | 25 | 1440 | < th | dose dependent | rect. | 18 | 4 |
| 785 | 76.80 | wind | 9 | 14400 | > th | dose independent | rect. | 4 | 13 |
| 841 | 76.88 | temperature | 20 | 1440 | > th | dose independent | rect. | 4 | 1 |
| 854 | 76.89 | atmosphere | 995 | 270 | > th | dose dependent | rect. | 3 | 19 |
| 867 | 76.91 | wind | 9 | 14400 | > th | dose dependent | rect. | 10 | 4 |
| 870 | 76.92 | temperature | 25 | 270 | < th | dose independent | no | NA | NA |
| 871 | 76.92 | temperature | 20 | 1440 | < th | dose independent | rect. | 4 | 1 |
| 893 | 76.95 | atmosphere | 1015 | 10 | < th | dose dependent | rect. | 9 | 21 |
| 899 | 76.97 | wind | 9 | 14400 | < th | dose independent | rect. | 6 | 8 |
| 921 | 76.99 | wind | 9 | 14400 | > th | dose dependent | rect. | 10 | 7 |
| 932 | 77.01 | temperature | 25 | 270 | < th | dose independent | rect. | 20 | 23 |
| 933 | 77.01 | wind | 9 | 14400 | > th | dose dependent | sin | 3 | NA |
| 945 | 77.02 | radiation | 1 | 4320 | < th | dose independent | rect. | 17 | 1 |