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Os01g0717000

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to GmCK1p (EC 2.7.1.32).


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 12.3 (0.0258) R2 : 0.823
β1 : -- (--) R2dD : -- R2D : --
β2 : 3.04 (0.066) R2dC : 0.823 R2C : 0.819
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.166 (0.0544) R2dN8 : 0.00469 R2N8 : -3.86e-05
σ : 0.487
deviance : 108.41
__
_____
C
peak time of C : 16
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
85.55 0.435 12.5 -0.713 2.99 0.232 -0.194 -6.72 0.0534 16 30 1473 -- --
93.67 0.451 12.3 0.494 3 -0.309 -0.258 -- 0.193 16 32.6 3002 -- --
85.66 0.431 12.5 -0.709 2.99 0.231 -- -6.7 0.0532 16 30.01 1476 -- --
90.43 0.443 12.3 0.642 3.02 -0.49 -- -- 0.146 16.1 31.48 2919 -- --
554.82 1.1 12.3 0.00365 -- 1.4 -- -2.59 0.15 -- 30.01 1476 -- --
102.96 0.476 12.3 0.455 3.05 -- -0.0383 -- 0.217 16 -- -- -- --
102.97 0.475 12.3 0.455 3.05 -- -- -- 0.217 16 -- -- -- --
556.62 1.1 12.3 0.219 -- 1.21 -- -- 0.177 -- 30.01 1476 -- --
99.26 0.464 12.3 -- 3.02 -0.541 -- -- 0.0761 16.1 31.5 3336 -- --
609.81 1.15 12.3 0.33 -- -- -- -- 0.136 -- -- -- -- --
108.41 0.487 12.3 -- 3.04 -- -- -- 0.166 16 -- -- -- --
557.89 1.1 12.3 -- -- 1.23 -- -- 0.153 -- 30.01 1476 -- --
612.69 1.16 12.3 -- -- -- -- -- 0.0989 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 71.16 wind 9.0 720 < th dose independent rect. 8 21
2 73.74 precipitation 0.1 720 < th dose independent rect. 8 21
3 73.74 precipitation 0.1 720 < th dose dependent rect. 8 21
4 73.79 wind 7.0 720 < th dose independent rect. 17 3
5 74.06 precipitation 0.1 720 < th dose independent rect. 17 3
6 74.06 precipitation 0.1 720 < th dose dependent rect. 17 3
7 74.23 wind 1.0 720 > th dose independent rect. 17 3
9 74.79 wind 9.0 720 < th dose independent rect. 1 19
11 75.79 precipitation 0.1 720 < th dose independent rect. 17 12
12 75.79 precipitation 0.1 720 < th dose dependent rect. 17 12
13 76.04 wind 9.0 720 < th dose independent rect. 8 13
14 76.05 wind 9.0 720 < th dose independent rect. 9 11
15 76.29 temperature 10.0 720 > th dose independent rect. 17 3
16 76.29 atmosphere 1015.0 720 < th dose independent rect. 17 3
17 76.29 radiation 30.0 720 < th dose independent rect. 17 3
19 76.29 temperature 10.0 720 > th dose independent rect. 20 21
20 76.50 wind 9.0 720 < th dose independent rect. 5 3
21 76.50 temperature 10.0 720 > th dose independent rect. 5 3
22 76.50 temperature 30.0 720 < th dose independent rect. 5 3
23 76.50 humidity 50.0 720 > th dose independent rect. 5 3
25 76.50 atmosphere 995.0 720 > th dose independent rect. 5 3
26 76.50 atmosphere 1015.0 720 < th dose independent rect. 5 3
27 76.50 temperature 10.0 720 > th dose independent rect. 8 21
30 76.56 radiation 40.0 720 < th dose independent rect. 5 3
31 76.58 wind 7.0 270 < th dose independent rect. 16 13
34 76.97 precipitation 0.1 720 < th dose independent rect. 5 3
35 76.97 precipitation 0.1 720 < th dose dependent rect. 5 3
38 77.08 wind 9.0 720 < th dose independent rect. 17 20
39 77.33 radiation 40.0 720 < th dose dependent rect. 5 3
40 77.40 wind 9.0 720 < th dose independent rect. 8 6
41 77.42 precipitation 0.1 720 < th dose independent rect. 1 19
42 77.42 precipitation 0.1 720 < th dose dependent rect. 1 19
43 77.55 precipitation 0.1 720 < th dose independent rect. 17 20
44 77.55 precipitation 0.1 720 < th dose dependent rect. 17 20
54 78.53 precipitation 0.1 720 < th dose independent rect. 8 13
56 78.53 precipitation 0.1 720 < th dose dependent rect. 8 13
60 78.69 radiation 40.0 720 < th dose dependent rect. 17 3
61 78.75 atmosphere 1000.0 90 > th dose independent rect. 5 22
62 78.80 atmosphere 1000.0 10 > th dose independent rect. 6 21
63 78.84 atmosphere 995.0 720 > th dose independent rect. 20 21
68 79.09 precipitation 0.1 720 < th dose independent rect. 9 11
69 79.09 precipitation 0.1 720 < th dose dependent rect. 9 11
74 79.34 temperature 10.0 720 > th dose independent rect. 5 12
75 79.34 temperature 10.0 720 > th dose independent rect. 17 12
76 79.34 atmosphere 1015.0 720 < th dose independent rect. 5 12
77 79.34 radiation 30.0 720 < th dose independent rect. 17 12
79 79.35 radiation 1.0 90 < th dose dependent rect. 3 18
81 79.47 wind 3.0 90 < th dose independent rect. 3 2
85 79.54 temperature 10.0 720 > th dose independent rect. 20 5
86 79.54 temperature 30.0 720 < th dose independent rect. 20 5
87 79.54 humidity 50.0 720 > th dose independent rect. 20 5
90 79.54 atmosphere 995.0 720 > th dose independent rect. 20 5
91 79.54 radiation 1.0 720 < th dose independent rect. 20 5
97 79.54 temperature 10.0 720 > th dose independent rect. 1 19
98 79.54 radiation 10.0 720 < th dose dependent rect. 20 5
102 79.55 wind 5.0 90 < th dose dependent rect. 3 2
109 79.62 temperature 30.0 720 < th dose independent rect. 20 13
110 79.65 precipitation 0.1 720 < th dose independent rect. 1 4
111 79.65 precipitation 0.1 720 < th dose dependent rect. 1 4
112 79.70 precipitation 0.1 720 < th dose independent rect. 8 6
113 79.70 precipitation 0.1 720 < th dose dependent rect. 8 6
114 79.71 precipitation 0.1 90 < th dose independent rect. 3 2
115 79.71 precipitation 0.1 90 < th dose dependent rect. 3 2
116 79.72 wind 9.0 720 < th dose independent rect. 17 18
121 79.77 temperature 10.0 720 > th dose independent rect. 8 5
122 79.77 atmosphere 995.0 720 > th dose independent rect. 8 5
123 79.77 atmosphere 1015.0 720 < th dose independent rect. 8 5
124 79.77 temperature 10.0 720 > th dose independent rect. 13 19
148 80.03 wind 7.0 90 < th dose independent rect. 18 12
154 80.19 radiation 1.0 720 < th dose dependent rect. 1 4
160 80.32 humidity 50.0 720 > th dose independent rect. 17 3
161 80.32 wind 9.0 720 < th dose independent rect. 20 5
173 80.52 radiation 40.0 10 < th dose dependent rect. 7 20
175 80.60 wind 9.0 90 < th dose dependent rect. 18 12
176 80.64 humidity 50.0 720 > th dose dependent rect. 20 5
180 80.67 precipitation 0.1 10 < th dose independent rect. 3 3
181 80.67 precipitation 0.1 10 < th dose dependent rect. 3 3
182 80.74 atmosphere 995.0 720 > th dose independent rect. 5 12
184 80.79 radiation 1.0 720 > th dose independent rect. 8 5
188 80.83 temperature 10.0 90 > th dose independent rect. 3 2
190 80.83 temperature 30.0 90 < th dose independent rect. 3 2
191 80.83 humidity 50.0 90 > th dose independent rect. 3 2
194 80.83 atmosphere 995.0 90 > th dose independent rect. 3 2
195 80.83 atmosphere 1010.0 90 < th dose independent rect. 3 2
197 80.83 radiation 20.0 90 < th dose independent rect. 3 2
200 80.83 temperature 10.0 90 > th dose independent rect. 5 22
201 80.85 radiation 40.0 90 < th dose dependent rect. 3 2
205 80.90 radiation 1.0 90 < th dose independent rect. 3 2
212 80.98 wind 7.0 10 < th dose dependent rect. 3 3
219 81.03 temperature 10.0 720 > th dose independent rect. 9 11
220 81.03 atmosphere 1015.0 720 < th dose independent rect. 9 11
221 81.03 temperature 10.0 720 > th dose independent rect. 20 13
222 81.03 humidity 50.0 720 > th dose independent rect. 20 13
223 81.03 atmosphere 995.0 720 > th dose independent rect. 20 13
226 81.06 temperature 10.0 720 > th dose independent rect. 21 11
227 81.06 temperature 30.0 720 < th dose independent rect. 21 11
228 81.06 humidity 50.0 720 > th dose independent rect. 21 11
230 81.06 atmosphere 995.0 720 > th dose independent rect. 21 11
231 81.06 temperature 10.0 720 > th dose independent rect. 8 13
233 81.10 humidity 50.0 90 > th dose dependent rect. 3 2
234 81.11 radiation 1.0 720 < th dose independent rect. 1 4
237 81.13 radiation 40.0 270 < th dose dependent rect. 16 13
238 81.14 radiation 40.0 720 < th dose independent rect. 21 11
244 81.18 wind 9.0 720 < th dose independent rect. 1 4
247 81.20 temperature 10.0 90 > th dose dependent rect. 3 2
248 81.21 temperature 10.0 720 > th dose independent rect. 1 4
249 81.21 temperature 30.0 720 < th dose independent rect. 1 4
250 81.21 humidity 50.0 720 > th dose independent rect. 1 4
253 81.21 atmosphere 995.0 720 > th dose independent rect. 1 4
257 81.21 temperature 10.0 720 > th dose independent rect. 5 20
261 81.22 temperature 10.0 720 > th dose independent rect. 13 4
262 81.22 atmosphere 1015.0 720 < th dose independent rect. 13 4
263 81.22 temperature 10.0 720 > th dose independent rect. 17 20
267 81.30 radiation 40.0 10 < th dose independent rect. 6 21
269 81.32 radiation 40.0 90 < th dose independent rect. 6 21
276 81.44 radiation 40.0 720 < th dose independent rect. 20 13
280 81.48 humidity 60.0 90 > th dose independent rect. 17 13
287 81.57 temperature 10.0 10 > th dose dependent rect. 3 3
288 81.62 precipitation 0.1 720 < th dose independent rect. 23 6
289 81.62 precipitation 0.1 720 < th dose dependent rect. 23 6
291 81.64 atmosphere 1015.0 720 < th dose independent rect. 1 19
296 81.65 atmosphere 1015.0 90 < th dose dependent rect. 3 2
301 81.69 radiation 40.0 720 < th dose independent rect. 14 18
304 81.74 radiation 40.0 720 < th dose dependent rect. 21 11
306 81.79 wind 9.0 720 < th dose independent rect. 21 11
307 81.81 radiation 1.0 90 < th dose independent rect. 3 18
317 81.85 wind 9.0 720 < th dose independent rect. 20 13
319 81.86 radiation 10.0 90 < th dose dependent rect. 17 13
352 81.99 wind 9.0 90 < th dose independent rect. 5 22
360 82.08 precipitation 0.1 90 < th dose independent rect. 18 12
361 82.08 precipitation 0.1 90 < th dose dependent rect. 18 12
373 82.17 radiation 1.0 720 < th dose dependent rect. 23 6
382 82.25 precipitation 0.1 270 < th dose independent rect. 5 11
385 82.25 precipitation 0.1 270 < th dose dependent rect. 5 11
398 82.40 precipitation 0.1 270 < th dose independent rect. 1 12
400 82.40 precipitation 0.1 270 < th dose dependent rect. 1 12
405 82.49 radiation 10.0 10 < th dose independent rect. 3 3
413 82.59 atmosphere 1015.0 90 < th dose independent rect. 5 22
418 82.61 precipitation 0.1 90 < th dose independent rect. 5 22
419 82.61 precipitation 0.1 90 < th dose dependent rect. 5 22
422 82.63 temperature 10.0 10 > th dose independent rect. 3 3
424 82.63 temperature 30.0 10 < th dose independent rect. 3 3
425 82.63 humidity 50.0 10 > th dose independent rect. 3 3
428 82.63 atmosphere 995.0 10 > th dose independent rect. 3 3
429 82.63 atmosphere 1010.0 10 < th dose independent rect. 3 3
435 82.63 temperature 10.0 10 > th dose independent rect. 6 21
439 82.69 wind 9.0 720 < th dose independent rect. 23 15
441 82.71 radiation 40.0 10 < th dose dependent rect. 3 3
442 82.72 precipitation 0.1 720 < th dose independent rect. 20 5
443 82.72 precipitation 0.1 720 < th dose dependent rect. 20 5
463 82.80 wind 1.0 43200 > th dose independent rect. 24 6
466 82.81 wind 1.0 43200 < th dose independent rect. 24 6
471 82.85 radiation 10.0 14400 > th dose independent rect. 17 15
474 82.88 wind 1.0 43200 < th dose dependent rect. 3 4
512 83.03 temperature 10.0 720 > th dose independent rect. 11 6
513 83.03 atmosphere 1015.0 720 < th dose independent rect. 11 6
521 83.03 temperature 10.0 720 > th dose independent rect. 17 18
532 83.06 radiation 10.0 14400 > th dose independent rect. 6 2
549 83.06 atmosphere 1015.0 10 < th dose independent rect. 6 21
554 83.07 humidity 50.0 720 > th dose independent rect. 17 12
557 83.08 atmosphere 995.0 90 > th dose dependent rect. 3 2
567 83.10 precipitation 0.1 10 < th dose independent rect. 6 21
571 83.10 precipitation 0.1 10 < th dose dependent rect. 6 21
594 83.15 radiation 1.0 720 < th dose independent rect. 23 6
595 83.15 wind 1.0 270 > th dose independent rect. 9 11
597 83.16 wind 1.0 43200 < th dose independent rect. 3 3
606 83.19 radiation 1.0 90 < th dose independent rect. 2 21
609 83.20 wind 9.0 720 < th dose independent rect. 23 6
610 83.20 wind 9.0 270 < th dose independent rect. 5 11
616 83.24 temperature 10.0 720 > th dose independent rect. 23 6
617 83.24 temperature 30.0 720 < th dose independent rect. 23 6
618 83.24 humidity 50.0 720 > th dose independent rect. 23 6
621 83.24 atmosphere 995.0 720 > th dose independent rect. 23 6
625 83.24 temperature 10.0 720 > th dose independent rect. 5 18
629 83.25 wind 1.0 720 > th dose independent rect. 8 5
648 83.32 humidity 50.0 10 > th dose dependent rect. 3 3
650 83.33 atmosphere 995.0 720 > th dose independent rect. 13 4
652 83.33 temperature 10.0 90 > th dose independent rect. 18 12
655 83.33 radiation 20.0 90 < th dose independent rect. 18 12
665 83.36 wind 9.0 10 < th dose independent rect. 6 21
669 83.38 wind 1.0 43200 > th dose independent rect. 3 3
679 83.41 atmosphere 995.0 90 > th dose independent rect. 18 12
694 83.50 temperature 30.0 1440 < th dose independent sin 11 NA
718 83.56 temperature 30.0 90 < th dose independent rect. 18 12
741 83.66 humidity 50.0 720 > th dose dependent rect. 5 3
776 83.89 humidity 50.0 720 > th dose independent rect. 8 5
811 83.97 wind 1.0 43200 < th dose dependent rect. 2 8
812 83.99 precipitation 0.1 43200 < th dose independent rect. 14 7
816 83.99 precipitation 0.1 43200 < th dose dependent rect. 14 7
817 83.99 wind 9.0 10 < th dose dependent rect. 18 13
818 83.99 precipitation 0.1 43200 > th dose dependent rect. 12 13
829 84.03 wind 9.0 270 < th dose independent rect. 1 12
836 84.05 precipitation 0.1 43200 > th dose independent rect. 14 7
845 84.07 temperature 30.0 1440 > th dose independent sin 11 NA
862 84.10 temperature 30.0 14400 > th dose dependent rect. 18 1
886 84.12 precipitation 0.1 43200 > th dose dependent rect. 19 3
898 84.16 precipitation 0.1 43200 < th dose independent rect. 19 3
900 84.16 temperature 30.0 10 < th dose independent rect. 18 13
902 84.16 precipitation 0.1 43200 < th dose dependent rect. 19 3
906 84.17 precipitation 0.1 43200 > th dose independent rect. 14 4
909 84.17 temperature 30.0 1440 < th dose independent rect. 15 19
928 84.18 temperature 30.0 1440 < th dose independent rect. 15 17
934 84.19 temperature 30.0 1440 < th dose independent rect. 15 15
939 84.19 precipitation 0.1 43200 > th dose dependent rect. 9 13
951 84.21 precipitation 0.1 43200 < th dose independent rect. 12 6
956 84.21 precipitation 0.1 43200 < th dose dependent rect. 12 6
959 84.22 precipitation 0.1 720 < th dose independent rect. 13 4
960 84.22 precipitation 0.1 43200 < th dose independent rect. 14 4
964 84.22 temperature 30.0 1440 < th dose independent rect. 15 12
969 84.22 temperature 30.0 90 < th dose dependent rect. 3 2
970 84.22 precipitation 0.1 720 < th dose dependent rect. 13 4
971 84.22 precipitation 0.1 43200 < th dose dependent rect. 14 4
972 84.23 temperature 30.0 1440 < th dose independent rect. 15 5
973 84.23 temperature 30.0 1440 < th dose independent rect. 15 7
983 84.24 temperature 30.0 1440 < th dose independent rect. 15 10