Os01g0711900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os01g0711900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 68.68 | 0.389 | 3.36 | 0.195 | 0.261 | 0.198 | -0.485 | 1.36 | -0.0672 | 6.56 | 90.49 | 5849 | -- | -- |
| 71.11 | 0.393 | 3.36 | 0.106 | 0.298 | 0.275 | -0.493 | -- | -0.111 | 6.43 | 97.87 | 4790 | -- | -- |
| 69.24 | 0.388 | 3.36 | 0.191 | 0.261 | 0.199 | -- | 1.38 | -0.0671 | 6.59 | 91 | 5929 | -- | -- |
| 71.72 | 0.394 | 3.36 | 0.0983 | 0.295 | 0.273 | -- | -- | -0.11 | 6.49 | 110.1 | 4817 | -- | -- |
| 72.76 | 0.397 | 3.36 | 0.194 | -- | 0.199 | -- | 1.37 | -0.0605 | -- | 90.53 | 5835 | -- | -- |
| 72.08 | 0.398 | 3.34 | 0.0888 | 0.263 | -- | -0.494 | -- | -0.0481 | 6.48 | -- | -- | -- | -- |
| 72.69 | 0.399 | 3.34 | 0.0821 | 0.261 | -- | -- | -- | -0.0465 | 6.52 | -- | -- | -- | -- |
| 75.28 | 0.404 | 3.36 | 0.101 | -- | 0.276 | -- | -- | -0.098 | -- | 110.7 | 4261 | -- | -- |
| 71.97 | 0.395 | 3.36 | -- | 0.294 | 0.264 | -- | -- | -0.118 | 6.45 | 135.1 | 4789 | -- | -- |
| 76.22 | 0.408 | 3.35 | 0.0886 | -- | -- | -- | -- | -0.0411 | -- | -- | -- | -- | -- |
| 72.86 | 0.399 | 3.35 | -- | 0.262 | -- | -- | -- | -0.0556 | 6.5 | -- | -- | -- | -- |
| 75.54 | 0.405 | 3.36 | -- | -- | 0.266 | -- | -- | -0.107 | -- | 132 | 4260 | -- | -- |
| 76.43 | 0.408 | 3.35 | -- | -- | -- | -- | -- | -0.0509 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 60.56 | humidity | 80.0 | 10 | < th | dose independent | rect. | 6 | 2 |
| 3 | 60.72 | radiation | 10.0 | 30 | > th | dose independent | rect. | 7 | 1 |
| 6 | 61.16 | humidity | 80.0 | 10 | < th | dose independent | rect. | 23 | 9 |
| 26 | 62.66 | radiation | 10.0 | 10 | > th | dose independent | rect. | 16 | 16 |
| 36 | 63.17 | temperature | 25.0 | 30 | > th | dose independent | rect. | 7 | 1 |
| 58 | 66.22 | atmosphere | 1005.0 | 10 | > th | dose independent | rect. | 7 | 1 |
| 59 | 66.27 | humidity | 90.0 | 10 | < th | dose dependent | rect. | 7 | 1 |
| 61 | 66.35 | wind | 5.0 | 10 | < th | dose dependent | rect. | 7 | 1 |
| 64 | 66.45 | atmosphere | 995.0 | 10 | > th | dose independent | rect. | 8 | 23 |
| 65 | 66.46 | humidity | 90.0 | 90 | < th | dose dependent | rect. | 1 | 7 |
| 68 | 66.50 | wind | 5.0 | 10 | < th | dose independent | rect. | 7 | 1 |
| 83 | 66.63 | temperature | 15.0 | 10 | > th | dose dependent | rect. | 7 | 1 |
| 88 | 66.76 | wind | 1.0 | 30 | > th | dose independent | rect. | 7 | 1 |
| 91 | 66.76 | atmosphere | 1005.0 | 90 | > th | dose dependent | rect. | 2 | 1 |
| 92 | 66.77 | atmosphere | 1000.0 | 30 | > th | dose independent | rect. | 3 | 23 |
| 99 | 66.86 | atmosphere | 1005.0 | 10 | > th | dose dependent | rect. | 2 | 2 |
| 105 | 66.94 | temperature | 15.0 | 30 | > th | dose independent | rect. | 8 | 23 |
| 113 | 67.05 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 3 | 1 |
| 116 | 67.09 | precipitation | 0.1 | 10 | < th | dose independent | rect. | 7 | 1 |
| 117 | 67.09 | precipitation | 0.1 | 10 | < th | dose dependent | rect. | 7 | 1 |
| 121 | 67.11 | temperature | 10.0 | 10 | > th | dose independent | rect. | 7 | 1 |
| 123 | 67.11 | temperature | 30.0 | 10 | < th | dose independent | rect. | 7 | 1 |
| 124 | 67.11 | humidity | 50.0 | 10 | > th | dose independent | rect. | 7 | 1 |
| 126 | 67.11 | atmosphere | 995.0 | 10 | > th | dose independent | rect. | 7 | 1 |
| 127 | 67.11 | atmosphere | 1015.0 | 10 | < th | dose independent | rect. | 7 | 1 |
| 129 | 67.11 | atmosphere | 995.0 | 10 | > th | dose dependent | rect. | 7 | 1 |
| 131 | 67.16 | radiation | 1.0 | 10 | > th | dose dependent | rect. | 7 | 1 |
| 147 | 67.23 | wind | 9.0 | 1440 | < th | dose independent | rect. | 8 | 1 |
| 150 | 67.23 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 8 | 1 |
| 155 | 67.23 | humidity | 50.0 | 1440 | > th | dose independent | rect. | 8 | 1 |
| 157 | 67.23 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 8 | 1 |
| 160 | 67.23 | atmosphere | 1015.0 | 1440 | < th | dose independent | rect. | 8 | 1 |
| 161 | 67.23 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 9 | 23 |
| 166 | 67.27 | wind | 9.0 | 30 | < th | dose independent | rect. | 8 | 23 |
| 169 | 67.28 | radiation | 40.0 | 30 | < th | dose independent | rect. | 7 | 1 |
| 170 | 67.29 | precipitation | 0.1 | 10 | < th | dose independent | rect. | 8 | 23 |
| 171 | 67.29 | precipitation | 0.1 | 10 | < th | dose dependent | rect. | 8 | 23 |
| 178 | 67.37 | radiation | 20.0 | 10 | < th | dose independent | rect. | 7 | 1 |
| 186 | 67.44 | temperature | 25.0 | 90 | > th | dose independent | rect. | 1 | 1 |
| 188 | 67.46 | temperature | 25.0 | 90 | > th | dose dependent | rect. | 1 | 2 |
| 190 | 67.54 | radiation | 1.0 | 4320 | < th | dose dependent | rect. | 3 | 1 |
| 201 | 67.61 | precipitation | 0.1 | 1440 | < th | dose independent | rect. | 8 | 1 |
| 203 | 67.61 | precipitation | 0.1 | 1440 | < th | dose dependent | rect. | 8 | 1 |
| 214 | 67.64 | wind | 9.0 | 1440 | < th | dose independent | rect. | 3 | 1 |
| 215 | 67.64 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 3 | 1 |
| 218 | 67.64 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 3 | 1 |
| 222 | 67.64 | humidity | 50.0 | 1440 | > th | dose independent | rect. | 3 | 1 |
| 231 | 67.64 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 3 | 1 |
| 232 | 67.64 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 3 | 1 |
| 252 | 67.64 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 4 | 23 |
| 265 | 67.69 | humidity | 50.0 | 30 | > th | dose independent | rect. | 8 | 23 |
| 267 | 67.71 | humidity | 80.0 | 10 | < th | dose independent | rect. | 20 | 12 |
| 270 | 67.73 | wind | 3.0 | 30 | < th | dose independent | rect. | 2 | 1 |
| 272 | 67.74 | atmosphere | 1005.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 273 | 67.74 | temperature | 15.0 | 30 | > th | dose independent | rect. | 3 | 23 |
| 276 | 67.75 | wind | 3.0 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 288 | 67.78 | humidity | 90.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 289 | 67.78 | humidity | 50.0 | 30 | > th | dose dependent | rect. | 2 | 1 |
| 292 | 67.79 | radiation | 10.0 | 10 | > th | dose independent | sin | 11 | NA |
| 294 | 67.79 | temperature | 10.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 296 | 67.79 | temperature | 30.0 | 30 | < th | dose independent | rect. | 2 | 1 |
| 297 | 67.79 | humidity | 50.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 301 | 67.79 | atmosphere | 1010.0 | 30 | < th | dose independent | rect. | 2 | 1 |
| 303 | 67.79 | radiation | 1.0 | 30 | < th | dose independent | rect. | 2 | 1 |
| 308 | 67.79 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 2 | 1 |
| 311 | 67.79 | radiation | 1.0 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 316 | 67.79 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 322 | 67.83 | atmosphere | 1015.0 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 327 | 67.88 | wind | 1.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 329 | 67.88 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 338 | 67.93 | atmosphere | 1015.0 | 10 | < th | dose dependent | rect. | 7 | 1 |
| 339 | 67.94 | humidity | 80.0 | 14400 | < th | dose dependent | rect. | 4 | 5 |
| 348 | 67.96 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 3 | 23 |
| 352 | 67.96 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 3 | 23 |
| 364 | 68.03 | wind | 1.0 | 10 | > th | dose independent | rect. | 8 | 23 |
| 409 | 68.20 | humidity | 70.0 | 14400 | > th | dose independent | rect. | 8 | 1 |
| 429 | 68.27 | wind | 9.0 | 30 | < th | dose independent | rect. | 3 | 23 |
| 445 | 68.36 | humidity | 70.0 | 14400 | < th | dose independent | rect. | 8 | 1 |
| 447 | 68.36 | humidity | 70.0 | 14400 | > th | dose independent | rect. | 4 | 5 |
| 462 | 68.38 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 6 | 2 |
| 475 | 68.39 | radiation | 1.0 | 90 | > th | dose independent | rect. | 8 | 22 |
| 491 | 68.46 | radiation | 1.0 | 10 | > th | dose dependent | rect. | 16 | 16 |
| 503 | 68.48 | humidity | 50.0 | 30 | > th | dose independent | rect. | 3 | 23 |
| 506 | 68.48 | radiation | 10.0 | 30 | < th | dose dependent | rect. | 3 | 23 |
| 518 | 68.57 | humidity | 70.0 | 14400 | < th | dose independent | rect. | 6 | 3 |
| 545 | 68.63 | atmosphere | 995.0 | 720 | > th | dose independent | rect. | 23 | 16 |
| 547 | 68.64 | humidity | 90.0 | 90 | < th | dose independent | rect. | 2 | 1 |
| 562 | 68.66 | humidity | 90.0 | 90 | < th | dose independent | rect. | 1 | 20 |
| 571 | 68.67 | wind | 1.0 | 14400 | < th | dose dependent | rect. | 6 | 1 |
| 587 | 68.72 | atmosphere | 1000.0 | 30 | > th | dose independent | rect. | 8 | 18 |
| 597 | 68.73 | atmosphere | 1000.0 | 90 | > th | dose independent | rect. | 8 | 11 |
| 599 | 68.74 | humidity | 70.0 | 4320 | > th | dose independent | rect. | 10 | 1 |
| 600 | 68.74 | humidity | 80.0 | 4320 | > th | dose independent | rect. | 7 | 7 |
| 604 | 68.74 | humidity | 50.0 | 4320 | > th | dose dependent | rect. | 11 | 1 |
| 607 | 68.75 | humidity | 80.0 | 4320 | < th | dose independent | rect. | 7 | 7 |
| 608 | 68.75 | radiation | 40.0 | 30 | < th | dose dependent | rect. | 7 | 1 |
| 609 | 68.75 | humidity | 90.0 | 4320 | < th | dose dependent | rect. | 23 | 16 |
| 620 | 68.76 | humidity | 90.0 | 4320 | < th | dose dependent | rect. | 11 | 2 |
| 622 | 68.76 | humidity | 50.0 | 4320 | > th | dose dependent | rect. | 2 | 13 |
| 645 | 68.77 | humidity | 90.0 | 4320 | < th | dose dependent | rect. | 3 | 12 |
| 653 | 68.78 | humidity | 50.0 | 4320 | > th | dose dependent | rect. | 23 | 16 |
| 665 | 68.80 | atmosphere | 995.0 | 720 | > th | dose independent | rect. | 7 | 8 |
| 668 | 68.80 | temperature | 20.0 | 30 | > th | dose dependent | rect. | 2 | 6 |
| 670 | 68.80 | humidity | 80.0 | 10 | < th | dose dependent | rect. | 20 | 12 |
| 760 | 68.86 | wind | 1.0 | 14400 | < th | dose independent | rect. | 4 | 3 |
| 777 | 68.86 | humidity | 50.0 | 4320 | > th | dose dependent | sin | 4 | NA |
| 778 | 68.86 | humidity | 90.0 | 4320 | < th | dose dependent | sin | 4 | NA |
| 809 | 68.87 | humidity | 50.0 | 14400 | > th | dose dependent | rect. | 8 | 1 |
| 824 | 68.88 | humidity | 70.0 | 4320 | > th | dose independent | sin | 4 | NA |
| 834 | 68.88 | wind | 1.0 | 14400 | > th | dose independent | rect. | 4 | 3 |
| 836 | 68.88 | temperature | 15.0 | 30 | > th | dose independent | rect. | 8 | 18 |
| 839 | 68.88 | humidity | 80.0 | 4320 | < th | dose dependent | rect. | 14 | 1 |
| 841 | 68.88 | wind | 1.0 | 14400 | < th | dose dependent | rect. | 4 | 3 |
| 859 | 68.89 | wind | 1.0 | 14400 | < th | dose dependent | rect. | 2 | 1 |
| 909 | 68.91 | wind | 7.0 | 14400 | > th | dose independent | rect. | 9 | 1 |