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Os01g0710800

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 10.2 (0.019) R2 : 0.126
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.323 (0.0399) R2dN8 : 0.162 R2N8 : 0.126
σ : 0.357
deviance : 58.46
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = humidity, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
31.95 0.266 10.2 -0.333 0.533 -0.392 -0.149 0.877 -0.436 0.824 92 606 -- --
33.19 0.268 10.3 -0.268 0.513 -0.397 -0.379 -- -0.423 0.699 92 696 -- --
31.94 0.263 10.2 -0.341 0.533 -0.387 -- 1.06 -0.428 0.777 92.97 583 -- --
33.69 0.27 10.3 -0.255 0.525 -0.413 -- -- -0.427 0.979 92.01 641 -- --
48.07 0.323 10.3 -0.206 -- -0.575 -- 0.44 -0.509 -- 90.19 769 -- --
35.42 0.279 10.2 -0.287 0.571 -- -0.411 -- -0.361 0.103 -- -- -- --
36.13 0.281 10.2 -0.272 0.573 -- -- -- -0.36 0.247 -- -- -- --
46.53 0.318 10.2 -0.275 -- -0.658 -- -- -0.389 -- 59.91 993 -- --
35.34 0.277 10.3 -- 0.525 -0.432 -- -- -0.416 0.989 91.97 641 -- --
56.78 0.352 10.2 -0.253 -- -- -- -- -0.351 -- -- -- -- --
38.07 0.289 10.2 -- 0.569 -- -- -- -0.33 0.221 -- -- -- --
48.31 0.324 10.2 -- -- -0.709 -- -- -0.397 -- 76.12 956 -- --
58.46 0.357 10.2 -- -- -- -- -- -0.323 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 29.56 atmosphere 1015.0 270 < th dose dependent rect. 12 10
3 29.75 atmosphere 1000.0 270 > th dose independent rect. 17 10
4 29.77 temperature 25.0 720 < th dose dependent rect. 24 6
16 30.01 temperature 10.0 30 > th dose dependent rect. 4 16
20 30.04 temperature 25.0 720 < th dose dependent rect. 1 2
30 30.15 temperature 10.0 270 > th dose dependent rect. 3 15
42 30.25 atmosphere 1010.0 90 < th dose dependent rect. 15 8
64 30.37 atmosphere 1000.0 10 > th dose independent rect. 20 8
76 30.46 atmosphere 1000.0 270 > th dose independent rect. 20 16
83 30.48 atmosphere 995.0 30 > th dose dependent rect. 11 17
107 30.58 temperature 30.0 720 < th dose dependent sin 8 NA
117 30.62 atmosphere 995.0 90 > th dose dependent rect. 9 18
135 30.68 atmosphere 1000.0 270 > th dose independent rect. 16 23
151 30.76 temperature 15.0 270 > th dose dependent rect. 1 7
156 30.78 atmosphere 1000.0 270 > th dose independent rect. 17 21
158 30.78 temperature 15.0 90 > th dose dependent rect. 3 6
162 30.80 precipitation 0.1 270 < th dose independent rect. 14 17
165 30.80 precipitation 0.1 270 < th dose dependent rect. 14 17
181 30.85 precipitation 0.1 270 < th dose independent rect. 12 10
183 30.85 precipitation 0.1 270 < th dose dependent rect. 12 10
185 30.86 atmosphere 1000.0 10 > th dose independent rect. 20 19
187 30.86 atmosphere 1010.0 10 < th dose dependent rect. 14 8
195 30.88 temperature 25.0 270 < th dose independent rect. 7 5
219 30.95 humidity 50.0 10 > th dose independent rect. 4 16
228 30.96 radiation 10.0 270 < th dose independent rect. 17 10
230 30.97 wind 1.0 270 > th dose independent rect. 13 18
243 31.00 temperature 10.0 270 > th dose independent rect. 12 10
244 31.00 temperature 10.0 270 > th dose independent rect. 22 14
251 31.01 radiation 40.0 30 < th dose independent rect. 3 8
252 31.01 wind 9.0 270 < th dose independent rect. 12 10
260 31.03 atmosphere 1015.0 270 < th dose independent rect. 12 10
266 31.04 wind 9.0 270 < th dose independent rect. 14 17
276 31.05 humidity 50.0 270 > th dose independent rect. 22 14
279 31.05 atmosphere 1015.0 10 < th dose dependent rect. 14 10
286 31.07 atmosphere 995.0 90 > th dose dependent rect. 19 9
287 31.07 atmosphere 995.0 270 > th dose dependent rect. 17 10
292 31.08 atmosphere 1000.0 30 > th dose independent rect. 20 16
298 31.09 wind 1.0 270 > th dose independent rect. 12 10
305 31.10 temperature 30.0 270 < th dose dependent rect. 7 4
319 31.14 temperature 30.0 270 < th dose dependent rect. 9 1
323 31.14 temperature 10.0 720 > th dose dependent rect. 21 11
325 31.15 temperature 10.0 270 > th dose independent rect. 7 7
326 31.15 atmosphere 995.0 270 > th dose independent rect. 7 7
327 31.15 atmosphere 1015.0 270 < th dose independent rect. 7 7
328 31.15 temperature 10.0 270 > th dose independent rect. 14 17
339 31.17 wind 9.0 270 < th dose independent rect. 22 14
346 31.18 precipitation 0.1 270 < th dose independent rect. 7 7
348 31.18 precipitation 0.1 270 < th dose dependent rect. 7 7
372 31.21 precipitation 0.1 270 < th dose independent rect. 3 14
382 31.21 precipitation 0.1 270 < th dose dependent rect. 3 14
397 31.24 humidity 50.0 270 > th dose independent rect. 7 7
400 31.24 temperature 10.0 10 > th dose dependent rect. 20 8
406 31.25 precipitation 0.1 270 < th dose independent rect. 22 14
409 31.25 precipitation 0.1 270 < th dose dependent rect. 22 14
435 31.28 atmosphere 1000.0 90 > th dose independent rect. 9 18
439 31.29 wind 9.0 270 < th dose independent rect. 7 7
442 31.29 temperature 30.0 270 < th dose dependent rect. 6 7
483 31.33 atmosphere 1015.0 90 < th dose dependent sin 18 NA
493 31.34 humidity 80.0 30 > th dose independent rect. 20 8
518 31.36 precipitation 0.1 270 < th dose independent rect. 10 23
524 31.36 radiation 10.0 270 < th dose dependent rect. 17 10
529 31.36 precipitation 0.1 270 < th dose dependent rect. 10 23
532 31.37 atmosphere 1000.0 30 > th dose independent rect. 11 17
535 31.37 atmosphere 1015.0 720 < th dose dependent rect. 12 3
545 31.38 temperature 25.0 720 < th dose dependent rect. 5 1
553 31.39 temperature 10.0 270 > th dose dependent rect. 23 9
554 31.39 temperature 10.0 30 > th dose dependent rect. 23 10
555 31.39 temperature 20.0 720 > th dose dependent rect. 23 10
562 31.40 wind 9.0 270 < th dose independent rect. 3 15
570 31.41 precipitation 0.1 90 < th dose independent rect. 3 6
572 31.41 radiation 40.0 270 < th dose independent rect. 14 17
575 31.41 precipitation 0.1 90 < th dose dependent rect. 3 6
597 31.42 atmosphere 995.0 90 > th dose dependent rect. 9 14
601 31.43 humidity 90.0 720 < th dose independent rect. 21 3
632 31.46 precipitation 0.1 10 < th dose independent rect. 4 16
640 31.46 precipitation 0.1 10 < th dose dependent rect. 4 16
656 31.48 temperature 10.0 270 > th dose independent rect. 17 10
660 31.48 temperature 10.0 270 > th dose independent rect. 3 14
661 31.48 atmosphere 1015.0 270 < th dose independent rect. 3 14
670 31.49 humidity 70.0 270 > th dose independent rect. 18 9
679 31.49 humidity 50.0 10 > th dose dependent rect. 20 8
687 31.50 humidity 60.0 90 > th dose independent rect. 3 6
689 31.50 wind 9.0 10 < th dose independent rect. 20 8
690 31.50 radiation 30.0 270 < th dose independent rect. 1 8
692 31.50 humidity 50.0 270 > th dose independent rect. 18 9
700 31.50 wind 9.0 30 < th dose independent rect. 4 16
715 31.51 temperature 10.0 10 > th dose independent rect. 20 8
716 31.51 temperature 30.0 10 < th dose independent rect. 20 8
717 31.51 humidity 50.0 10 > th dose independent rect. 20 8
721 31.51 radiation 1.0 10 < th dose independent rect. 20 8
726 31.51 temperature 30.0 270 < th dose independent rect. 18 9
728 31.51 temperature 10.0 10 > th dose independent rect. 4 16
731 31.51 atmosphere 1015.0 10 < th dose independent rect. 4 16
736 31.51 temperature 15.0 30 > th dose dependent rect. 3 8
737 31.51 radiation 1.0 10 < th dose dependent rect. 20 8
746 31.52 wind 5.0 90 < th dose independent rect. 3 6
750 31.52 wind 9.0 270 < th dose independent rect. 17 10
752 31.52 temperature 15.0 720 > th dose dependent rect. 23 1
761 31.52 atmosphere 1005.0 30 > th dose dependent rect. 11 12
805 31.54 precipitation 0.1 270 < th dose independent rect. 18 9
809 31.54 temperature 10.0 720 > th dose dependent rect. 21 3
813 31.54 precipitation 0.1 270 < th dose dependent rect. 18 9
815 31.54 atmosphere 995.0 30 > th dose dependent rect. 11 12
818 31.55 temperature 30.0 90 < th dose independent rect. 3 6
828 31.55 humidity 50.0 270 > th dose dependent rect. 18 9
834 31.55 radiation 40.0 90 < th dose dependent rect. 15 18
837 31.56 temperature 10.0 90 > th dose independent rect. 3 6
840 31.56 atmosphere 995.0 90 > th dose independent rect. 3 6
841 31.56 atmosphere 1015.0 90 < th dose independent rect. 3 6
846 31.56 temperature 10.0 90 > th dose independent rect. 9 18
859 31.57 precipitation 0.1 720 < th dose independent rect. 17 16
870 31.57 precipitation 0.1 720 < th dose dependent rect. 17 16
887 31.59 precipitation 0.1 30 < th dose independent rect. 20 8
889 31.59 radiation 40.0 30 < th dose independent rect. 4 16
898 31.59 precipitation 0.1 30 < th dose dependent rect. 20 8
907 31.59 atmosphere 1015.0 270 < th dose dependent rect. 12 19
917 31.60 wind 9.0 90 < th dose dependent rect. 3 6
926 31.60 wind 9.0 270 < th dose dependent rect. 14 17
929 31.60 atmosphere 1015.0 90 < th dose dependent rect. 15 18
933 31.61 atmosphere 1015.0 270 < th dose independent rect. 22 14
934 31.61 radiation 40.0 720 < th dose independent rect. 17 16
935 31.61 atmosphere 995.0 1440 > th dose independent rect. 21 18
954 31.63 atmosphere 995.0 10 > th dose independent rect. 4 16
974 31.65 precipitation 0.1 720 < th dose independent rect. 12 21
989 31.65 precipitation 0.1 720 < th dose dependent rect. 12 21
990 31.66 wind 1.0 270 > th dose independent rect. 7 7
992 31.66 humidity 60.0 90 > th dose independent rect. 3 8
993 31.66 precipitation 0.1 10 < th dose independent rect. 16 17