Os01g0710300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os01g0710300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 68.96 | 0.39 | 8 | 1.9 | 0.636 | -1.41 | 1.31 | 0.796 | 0.525 | 14.9 | 29.98 | 12 | -- | -- |
| 69.56 | 0.391 | 7.99 | 2.05 | 0.629 | -1.41 | 1.06 | -- | 0.563 | 14.9 | 29.98 | 12 | -- | -- |
| 72.94 | 0.398 | 7.98 | 2.08 | 0.602 | -1.49 | -- | -0.195 | 0.565 | 14.5 | 30.01 | 12 | -- | -- |
| 73.04 | 0.398 | 7.98 | 2.06 | 0.617 | -1.45 | -- | -- | 0.561 | 14.5 | 30.04 | 12 | -- | -- |
| 87.64 | 0.436 | 7.99 | 2.04 | -- | -2.08 | -- | -0.72 | 0.475 | -- | 30.09 | 12 | -- | -- |
| 96.44 | 0.46 | 7.92 | 2.37 | 1.11 | -- | 1.16 | -- | 0.836 | 14.5 | -- | -- | -- | -- |
| 101.17 | 0.471 | 7.92 | 2.4 | 1.11 | -- | -- | -- | 0.843 | 14.4 | -- | -- | -- | -- |
| 87.92 | 0.437 | 8.01 | 1.89 | -- | -2.07 | -- | -- | 0.416 | -- | 30.1 | 13 | -- | -- |
| 172.94 | 0.612 | 8.07 | -- | 0.29 | -2.32 | -- | -- | 0.177 | 14.6 | 29.8 | 19 | -- | -- |
| 173.54 | 0.616 | 7.92 | 2.36 | -- | -- | -- | -- | 0.815 | -- | -- | -- | -- | -- |
| 253.33 | 0.745 | 7.98 | -- | 1.06 | -- | -- | -- | 0.575 | 14.4 | -- | -- | -- | -- |
| 176.36 | 0.619 | 8.08 | -- | -- | -2.59 | -- | -- | 0.13 | -- | 29.9 | 20 | -- | -- |
| 319.94 | 0.835 | 7.98 | -- | -- | -- | -- | -- | 0.554 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 64.78 | temperature | 30 | 10 | < th | dose dependent | rect. | 7 | 23 |
| 3 | 65.74 | temperature | 30 | 10 | < th | dose dependent | rect. | 10 | 20 |
| 21 | 68.85 | temperature | 15 | 90 | > th | dose dependent | rect. | 5 | 21 |
| 23 | 68.95 | temperature | 30 | 10 | < th | dose dependent | rect. | 15 | 23 |
| 24 | 68.98 | temperature | 30 | 10 | < th | dose dependent | no | NA | NA |
| 27 | 69.20 | temperature | 30 | 10 | < th | dose dependent | rect. | 17 | 23 |
| 35 | 69.51 | temperature | 30 | 30 | < th | dose dependent | rect. | 13 | 23 |
| 45 | 70.07 | temperature | 30 | 10 | < th | dose dependent | rect. | 21 | 23 |
| 47 | 70.13 | temperature | 15 | 10 | > th | dose dependent | rect. | 3 | 23 |
| 48 | 70.20 | temperature | 10 | 10 | > th | dose dependent | no | NA | NA |
| 70 | 70.77 | temperature | 30 | 10 | < th | dose dependent | rect. | 1 | 23 |
| 81 | 71.08 | temperature | 30 | 10 | < th | dose dependent | rect. | 23 | 23 |
| 100 | 71.51 | temperature | 10 | 720 | > th | dose dependent | rect. | 20 | 19 |
| 137 | 72.21 | temperature | 15 | 10 | > th | dose dependent | rect. | 23 | 23 |
| 150 | 72.53 | temperature | 15 | 30 | > th | dose dependent | rect. | 19 | 23 |
| 206 | 73.34 | temperature | 15 | 10 | > th | dose dependent | rect. | 1 | 23 |
| 258 | 74.20 | temperature | 15 | 90 | > th | dose dependent | rect. | 5 | 16 |
| 285 | 74.45 | temperature | 20 | 720 | > th | dose independent | rect. | 5 | 19 |
| 291 | 74.53 | temperature | 25 | 720 | < th | dose dependent | rect. | 3 | 19 |
| 305 | 74.69 | temperature | 15 | 90 | > th | dose dependent | rect. | 11 | 23 |
| 310 | 74.75 | temperature | 15 | 10 | > th | dose dependent | rect. | 21 | 23 |
| 362 | 75.23 | temperature | 10 | 720 | > th | dose dependent | rect. | 12 | 20 |
| 364 | 75.26 | temperature | 15 | 720 | > th | dose dependent | rect. | 19 | 15 |
| 380 | 75.37 | temperature | 25 | 720 | < th | dose dependent | sin | 0 | NA |
| 390 | 75.43 | temperature | 10 | 720 | > th | dose dependent | rect. | 19 | 13 |
| 399 | 75.46 | temperature | 25 | 1440 | < th | dose dependent | rect. | 21 | 1 |
| 433 | 75.72 | temperature | 15 | 90 | > th | dose dependent | rect. | 5 | 13 |
| 461 | 75.80 | temperature | 20 | 10 | > th | dose dependent | rect. | 12 | 23 |
| 471 | 75.83 | temperature | 10 | 720 | > th | dose dependent | rect. | 4 | 12 |
| 551 | 76.13 | temperature | 10 | 720 | > th | dose dependent | sin | 5 | NA |
| 565 | 76.20 | temperature | 20 | 720 | > th | dose independent | rect. | 19 | 21 |
| 616 | 76.38 | temperature | 25 | 720 | < th | dose dependent | no | NA | NA |
| 656 | 76.50 | temperature | 10 | 10 | > th | dose dependent | sin | 7 | NA |
| 662 | 76.51 | temperature | 15 | 10 | > th | dose dependent | rect. | 17 | 23 |
| 685 | 76.60 | temperature | 25 | 720 | < th | dose dependent | rect. | 17 | 23 |
| 687 | 76.61 | temperature | 25 | 1440 | < th | dose dependent | rect. | 8 | 16 |
| 693 | 76.61 | temperature | 25 | 720 | < th | dose dependent | rect. | 15 | 23 |
| 703 | 76.64 | temperature | 15 | 720 | > th | dose dependent | rect. | 5 | 2 |
| 715 | 76.66 | temperature | 25 | 720 | < th | dose dependent | rect. | 19 | 23 |
| 775 | 76.83 | temperature | 25 | 1440 | < th | dose dependent | rect. | 17 | 20 |
| 793 | 76.86 | temperature | 20 | 720 | > th | dose independent | rect. | 19 | 15 |
| 812 | 76.89 | temperature | 20 | 720 | > th | dose independent | rect. | 12 | 20 |
| 884 | 77.02 | temperature | 15 | 10 | > th | dose dependent | rect. | 15 | 23 |