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Os01g0710200

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Amine oxidase domain containing protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 9.63 (0.0249) R2 : 0.759
β1 : 1.73 (0.0937) R2dD : 0.202 R2D : 0.0689
β2 : 1.55 (0.0652) R2dC : 0.326 R2C : 0.458
β3 : -2.26 (0.125) R2dE : 0.213 R2E : 0.208
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.401 (0.0553) R2dN8 : 0.0412 R2N8 : -0.0383
σ : 0.461
deviance : 97.82
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C
peak time of C : 8.16
E
wheather : temperature
threshold : 12.97
memory length : 256
response mode : > th
dose dependency : dose dependent
G
type of G : no
peak or start time of G : --
open length of G : --

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Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
89.38 0.444 9.58 2.13 1.59 -2.35 1.06 2.84 0.52 8.32 10.11 221 -- --
95.25 0.455 9.62 1.71 1.59 -2.29 1.08 -- 0.42 8.32 14.2 226 -- --
92.33 0.448 9.58 2.15 1.66 -2.35 -- 2.85 0.515 8.29 10.13 173 -- --
97.82 0.461 9.63 1.73 1.55 -2.26 -- -- 0.401 8.16 12.97 256 -- --
181.06 0.627 9.61 2.24 -- -3.47 -- 1.13 0.662 -- -3.854 504 -- --
149.55 0.573 9.69 1.23 2 -- 0.798 -- 0.0835 7.23 -- -- -- --
151.16 0.576 9.7 1.25 2 -- -- -- 0.081 7.15 -- -- -- --
181.96 0.628 9.63 2.05 -- -3.44 -- -- 0.611 -- -6.853 509 -- --
168.82 0.605 9.69 -- 1.71 -1.42 -- -- 0.109 7.65 2.193 264 -- --
362.79 0.89 9.74 1.29 -- -- -- -- 0.116 -- -- -- -- --
192.35 0.649 9.73 -- 2.01 -- -- -- -0.0582 7.11 -- -- -- --
259.3 0.75 9.74 -- -- -2.23 -- -- 0.127 -- 24.5 547 -- --
406.52 0.941 9.77 -- -- -- -- -- -0.0266 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 84.74 temperature 15 270 > th dose dependent rect. 6 22
3 85.23 temperature 30 270 < th dose dependent rect. 14 21
17 87.17 temperature 30 90 < th dose dependent rect. 17 19
23 87.82 temperature 10 720 > th dose dependent rect. 6 15
35 88.78 temperature 30 270 < th dose dependent rect. 10 23
39 88.92 temperature 10 720 > th dose dependent rect. 7 19
50 89.45 temperature 30 270 < th dose dependent rect. 8 23
61 90.00 temperature 10 270 > th dose dependent no NA NA
73 90.33 temperature 30 270 < th dose dependent rect. 1 23
81 90.47 temperature 30 270 < th dose dependent no NA NA
88 90.64 temperature 10 720 > th dose dependent rect. 23 20
92 90.74 temperature 30 720 < th dose dependent rect. 8 17
94 90.76 temperature 10 720 > th dose dependent sin 22 NA
95 90.78 temperature 10 720 > th dose dependent rect. 1 18
123 91.38 temperature 10 1440 > th dose dependent rect. 8 3
163 92.05 temperature 15 270 > th dose dependent rect. 20 23
174 92.16 temperature 30 1440 < th dose dependent rect. 8 1
190 92.28 temperature 15 270 > th dose dependent rect. 22 23
201 92.42 temperature 30 1440 < th dose dependent rect. 7 4
237 92.83 temperature 15 270 > th dose dependent rect. 18 23
241 92.86 humidity 60 14400 < th dose dependent rect. 17 3
287 93.22 temperature 15 270 > th dose dependent rect. 15 23
292 93.28 temperature 30 270 < th dose dependent rect. 19 23
358 93.75 humidity 50 14400 < th dose dependent rect. 17 17
423 94.08 temperature 30 90 < th dose dependent rect. 21 23
519 94.61 humidity 50 14400 > th dose independent rect. 17 16
546 94.72 humidity 50 14400 < th dose independent rect. 17 17
547 94.72 temperature 30 720 < th dose dependent sin 20 NA
624 95.04 temperature 15 270 > th dose dependent rect. 12 23
823 95.76 radiation 10 14400 < th dose independent rect. 17 1
930 96.09 temperature 10 1440 > th dose dependent no NA NA
946 96.12 temperature 10 1440 > th dose dependent rect. 13 23