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Os01g0708300

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 10.3 (0.0167) R2 : 0.459
β1 : -0.696 (0.0611) R2dD : 0.16 R2D : 0.162
β2 : 0.645 (0.0408) R2dC : 0.297 R2C : 0.293
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.0332 (0.0356) R2dN8 : 0.00138 R2N8 : 0.00415
σ : 0.314
deviance : 44.95
__
_____
C
peak time of C : 21.6
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = < th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
37.17 0.286 10.3 -0.941 0.651 -0.682 -0.227 0.378 -0.106 22 24.3 259 -- --
37.2 0.286 10.3 -0.869 0.73 -0.722 -0.206 -- -0.0875 22 24.2 276 -- --
37.36 0.285 10.3 -0.932 0.639 -0.687 -- 0.364 -0.107 22 24.4 284 -- --
37.36 0.287 10.3 -0.863 0.731 -0.727 -- -- -0.0882 22.1 24.2 254 -- --
50.96 0.332 10.3 -1.06 -- -1.03 -- 0.517 -0.187 -- 29.9 702 -- --
44.65 0.313 10.3 -0.706 0.645 -- -0.296 -- 0.0333 21.5 -- -- -- --
44.95 0.314 10.3 -0.696 0.645 -- -- -- 0.0332 21.6 -- -- -- --
51.35 0.334 10.3 -0.974 -- -1.04 -- -- -0.174 -- 29.71 708 -- --
55.26 0.348 10.3 -- 0.688 -0.396 -- -- 0.0547 21.8 24.2 254 -- --
69.5 0.39 10.3 -0.691 -- -- -- -- 0.0318 -- -- -- -- --
57.73 0.355 10.3 -- 0.644 -- -- -- 0.111 21.5 -- -- -- --
73.83 0.4 10.3 -- -- -0.691 -- -- 0.0229 -- 38.61 722 -- --
82.11 0.423 10.3 -- -- -- -- -- 0.108 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 21.01 temperature 10.0 270 > th dose dependent rect. 11 18
9 22.85 temperature 10.0 270 > th dose dependent rect. 22 8
13 23.26 temperature 20.0 90 > th dose independent rect. 12 19
18 23.86 temperature 15.0 10 > th dose dependent rect. 12 19
50 25.02 precipitation 0.1 270 < th dose independent rect. 11 18
51 25.02 precipitation 0.1 270 < th dose dependent rect. 11 18
55 25.12 humidity 50.0 270 > th dose independent rect. 5 6
59 25.19 temperature 10.0 270 > th dose independent rect. 5 6
60 25.19 atmosphere 995.0 270 > th dose independent rect. 5 6
61 25.19 atmosphere 1015.0 270 < th dose independent rect. 5 6
62 25.19 temperature 10.0 270 > th dose independent rect. 11 18
63 25.20 precipitation 0.1 270 < th dose independent rect. 5 6
64 25.20 precipitation 0.1 270 < th dose dependent rect. 5 6
66 25.23 wind 9.0 270 < th dose independent rect. 5 6
80 25.64 atmosphere 1015.0 270 < th dose independent rect. 11 18
94 26.01 wind 9.0 270 < th dose independent rect. 11 18
98 26.08 temperature 15.0 270 > th dose independent rect. 22 8
103 26.16 atmosphere 1010.0 270 < th dose independent rect. 22 8
105 26.21 atmosphere 995.0 270 > th dose independent rect. 11 18
115 26.39 wind 1.0 270 > th dose independent rect. 5 6
127 26.55 wind 9.0 270 < th dose independent rect. 6 16
128 26.56 wind 9.0 270 < th dose independent rect. 16 8
137 26.64 wind 9.0 270 < th dose dependent rect. 22 8
150 26.72 atmosphere 1015.0 270 < th dose independent rect. 24 16
153 26.73 temperature 10.0 270 > th dose independent rect. 16 8
154 26.73 radiation 40.0 270 < th dose independent rect. 16 8
155 26.73 temperature 10.0 270 > th dose independent rect. 24 16
157 26.74 precipitation 0.1 270 < th dose independent rect. 10 8
159 26.74 precipitation 0.1 270 < th dose dependent rect. 10 8
166 26.79 precipitation 0.1 270 < th dose independent rect. 22 8
168 26.79 precipitation 0.1 270 < th dose dependent rect. 22 8
175 26.85 temperature 30.0 270 < th dose independent rect. 22 8
176 26.85 humidity 50.0 270 > th dose independent rect. 22 8
179 26.85 atmosphere 995.0 270 > th dose independent rect. 22 8
180 26.85 radiation 20.0 270 < th dose independent rect. 22 8
183 26.85 temperature 10.0 270 > th dose independent rect. 6 16
184 26.86 wind 9.0 270 < th dose independent rect. 22 8
185 26.86 atmosphere 995.0 270 > th dose independent rect. 24 16
191 26.87 precipitation 0.1 270 < th dose independent rect. 24 16
194 26.87 precipitation 0.1 270 < th dose dependent rect. 24 16
196 26.89 radiation 40.0 270 < th dose dependent rect. 22 8
201 26.91 wind 9.0 270 < th dose independent rect. 18 16
202 26.92 humidity 50.0 270 > th dose independent rect. 18 16
207 26.95 humidity 60.0 270 > th dose independent rect. 7 2
208 26.95 temperature 10.0 270 > th dose independent rect. 10 8
210 26.95 atmosphere 1015.0 270 < th dose independent rect. 10 8
211 26.95 temperature 10.0 270 > th dose independent rect. 18 16
214 26.98 atmosphere 995.0 270 > th dose independent rect. 18 16
244 27.08 precipitation 0.1 270 < th dose independent rect. 7 2
245 27.08 precipitation 0.1 270 < th dose dependent rect. 7 2
246 27.09 wind 7.0 270 < th dose independent rect. 7 2
249 27.10 temperature 10.0 270 > th dose independent rect. 7 2
252 27.10 atmosphere 995.0 270 > th dose independent rect. 7 2
253 27.10 atmosphere 1015.0 270 < th dose independent rect. 7 2
255 27.10 temperature 10.0 270 > th dose independent rect. 9 22
270 27.21 radiation 40.0 270 < th dose dependent rect. 16 8
272 27.22 wind 1.0 270 > th dose independent rect. 16 8
274 27.22 humidity 50.0 270 > th dose dependent rect. 22 8
279 27.25 humidity 50.0 270 > th dose dependent rect. 23 6
285 27.30 precipitation 0.1 270 < th dose independent rect. 9 22
287 27.30 precipitation 0.1 270 < th dose dependent rect. 9 22
299 27.35 precipitation 0.1 270 < th dose independent rect. 18 16
300 27.35 precipitation 0.1 270 < th dose dependent rect. 18 16
305 27.38 atmosphere 995.0 270 > th dose independent rect. 16 8
314 27.42 wind 9.0 270 < th dose independent rect. 24 16
322 27.44 precipitation 0.1 270 < th dose independent rect. 6 16
323 27.44 precipitation 0.1 270 < th dose dependent rect. 6 16
325 27.45 precipitation 0.1 270 < th dose independent rect. 16 8
328 27.45 precipitation 0.1 270 < th dose dependent rect. 16 8
339 27.48 temperature 30.0 270 < th dose independent rect. 7 2
352 27.54 radiation 1.0 270 > th dose independent rect. 10 8
365 27.55 radiation 1.0 270 > th dose independent rect. 10 20
369 27.56 radiation 1.0 270 > th dose independent rect. 7 2
383 27.58 temperature 10.0 270 > th dose dependent rect. 6 4
386 27.59 radiation 1.0 270 > th dose independent rect. 6 4
411 27.63 humidity 50.0 270 > th dose independent rect. 24 16
417 27.66 radiation 1.0 270 > th dose independent rect. 4 7
454 27.77 temperature 30.0 270 < th dose independent rect. 5 6
456 27.77 temperature 10.0 270 > th dose dependent rect. 7 2
457 27.78 radiation 40.0 270 < th dose independent rect. 7 2
460 27.78 temperature 10.0 270 > th dose dependent rect. 5 6
462 27.79 wind 9.0 270 < th dose independent rect. 10 8
466 27.80 wind 1.0 270 > th dose independent rect. 18 16
485 27.82 wind 1.0 90 > th dose independent rect. 7 5
556 28.00 wind 9.0 270 < th dose dependent rect. 7 2
559 28.01 wind 1.0 270 > th dose independent rect. 6 17
565 28.03 humidity 50.0 270 > th dose independent rect. 16 8
572 28.06 radiation 1.0 270 < th dose dependent sin 7 NA
573 28.07 wind 1.0 270 > th dose independent rect. 7 2
599 28.14 temperature 30.0 270 < th dose independent rect. 6 4
610 28.17 atmosphere 995.0 270 > th dose independent rect. 10 8
627 28.22 wind 9.0 270 < th dose dependent rect. 6 5
639 28.28 radiation 1.0 270 < th dose independent sin 8 NA
651 28.32 wind 1.0 30 > th dose independent rect. 19 17
654 28.33 humidity 90.0 270 < th dose independent rect. 10 8
658 28.34 wind 1.0 270 > th dose independent rect. 10 8
674 28.36 humidity 50.0 10 > th dose dependent rect. 24 8
688 28.40 wind 9.0 270 < th dose independent rect. 9 22
720 28.48 wind 9.0 10 < th dose dependent rect. 24 8
767 28.56 atmosphere 995.0 270 > th dose independent rect. 6 17
799 28.60 radiation 1.0 270 < th dose independent rect. 23 14
802 28.61 wind 1.0 10 > th dose independent rect. 7 5
811 28.62 radiation 1.0 270 < th dose dependent rect. 23 14
844 28.70 radiation 1.0 10 > th dose independent rect. 7 5
884 28.74 temperature 10.0 10 > th dose dependent rect. 7 5
910 28.77 precipitation 0.1 10 < th dose independent rect. 7 5
913 28.77 precipitation 0.1 10 < th dose dependent rect. 7 5
930 28.81 temperature 10.0 10 > th dose independent rect. 7 5
932 28.81 atmosphere 995.0 10 > th dose independent rect. 7 5
933 28.81 atmosphere 1015.0 10 < th dose independent rect. 7 5
954 28.88 temperature 30.0 270 < th dose independent rect. 18 16
956 28.89 temperature 20.0 270 > th dose independent rect. 1 3
959 28.89 temperature 20.0 10 > th dose independent rect. 24 8
962 28.89 precipitation 0.1 10 < th dose independent rect. 12 19
963 28.89 temperature 10.0 10 > th dose dependent rect. 24 8
964 28.89 precipitation 0.1 10 < th dose dependent rect. 12 19
970 28.92 atmosphere 995.0 270 > th dose independent rect. 11 6
985 28.95 radiation 40.0 90 < th dose independent rect. 12 19