Os01g0708100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to N-myristoyl transferase (EC 2.3.1.97).
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Os01g0708100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to N-myristoyl transferase (EC 2.3.1.97).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 24.97 | 0.235 | 11.3 | 1.17 | 0.113 | -0.412 | 0.204 | 1.1 | 0.379 | 11.5 | 0.33 | 1304 | -- | -- |
| 25.99 | 0.237 | 11.3 | 1.13 | 0.081 | -0.802 | 0.345 | -- | 0.41 | 16 | 0.3001 | 1299 | -- | -- |
| 25.05 | 0.233 | 11.3 | 1.16 | 0.105 | -0.429 | -- | 0.857 | 0.381 | 10.7 | 0.3025 | 1314 | -- | -- |
| 25.54 | 0.235 | 11.3 | 1.16 | 0.0826 | -0.631 | -- | -- | 0.375 | 10.8 | 0.04 | 1323 | -- | -- |
| 25.3 | 0.234 | 11.3 | 1.14 | -- | -0.538 | -- | 0.845 | 0.381 | -- | 0.34 | 1242 | -- | -- |
| 28.52 | 0.25 | 11.3 | 0.966 | 0.229 | -- | -0.113 | -- | 0.302 | 10.3 | -- | -- | -- | -- |
| 28.57 | 0.25 | 11.3 | 0.961 | 0.229 | -- | -- | -- | 0.302 | 10.5 | -- | -- | -- | -- |
| 25.76 | 0.236 | 11.3 | 1.17 | -- | -0.639 | -- | -- | 0.368 | -- | 0.04 | 1290 | -- | -- |
| 51.65 | 0.337 | 11.3 | -- | 0.109 | 0.183 | -- | -- | 0.194 | 6.84 | 13.92 | 398 | -- | -- |
| 31.79 | 0.263 | 11.3 | 0.957 | -- | -- | -- | -- | 0.301 | -- | -- | -- | -- | -- |
| 52.92 | 0.34 | 11.3 | -- | 0.224 | -- | -- | -- | 0.195 | 10.2 | -- | -- | -- | -- |
| 51.87 | 0.335 | 11.4 | -- | -- | 0.228 | -- | -- | 0.165 | -- | 15.87 | 48 | -- | -- |
| 55.97 | 0.349 | 11.3 | -- | -- | -- | -- | -- | 0.195 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 25.06 | radiation | 1 | 720 | < th | dose dependent | rect. | 4 | 20 |
| 3 | 25.10 | radiation | 1 | 4320 | > th | dose independent | rect. | 16 | 3 |
| 13 | 25.12 | wind | 3 | 14400 | < th | dose independent | rect. | 12 | 1 |
| 14 | 25.12 | radiation | 1 | 720 | < th | dose dependent | rect. | 3 | 23 |
| 15 | 25.13 | humidity | 90 | 720 | > th | dose dependent | rect. | 5 | 19 |
| 23 | 25.19 | wind | 3 | 14400 | > th | dose independent | rect. | 12 | 1 |
| 34 | 25.21 | temperature | 25 | 1440 | > th | dose dependent | sin | 14 | NA |
| 35 | 25.22 | radiation | 1 | 4320 | < th | dose independent | rect. | 16 | 3 |
| 57 | 25.24 | radiation | 1 | 1440 | < th | dose dependent | rect. | 7 | 22 |
| 58 | 25.25 | temperature | 25 | 1440 | > th | dose dependent | rect. | 16 | 9 |
| 60 | 25.25 | radiation | 1 | 1440 | < th | dose dependent | rect. | 7 | 12 |
| 62 | 25.25 | radiation | 1 | 1440 | < th | dose dependent | rect. | 7 | 18 |
| 97 | 25.29 | radiation | 1 | 720 | < th | dose dependent | rect. | 1 | 23 |
| 110 | 25.31 | radiation | 1 | 1440 | > th | dose independent | rect. | 8 | 11 |
| 149 | 25.32 | radiation | 1 | 1440 | < th | dose independent | rect. | 8 | 17 |
| 174 | 25.33 | radiation | 1 | 1440 | < th | dose independent | rect. | 8 | 11 |
| 188 | 25.33 | radiation | 1 | 720 | > th | dose independent | rect. | 15 | 21 |
| 192 | 25.33 | wind | 5 | 14400 | < th | dose dependent | rect. | 11 | 2 |
| 213 | 25.35 | atmosphere | 1005 | 14400 | > th | dose independent | rect. | 11 | 1 |
| 218 | 25.36 | radiation | 1 | 1440 | > th | dose independent | sin | 17 | NA |
| 228 | 25.36 | radiation | 1 | 1440 | < th | dose dependent | sin | 16 | NA |
| 231 | 25.36 | radiation | 1 | 1440 | < th | dose dependent | rect. | 15 | 10 |
| 272 | 25.37 | radiation | 1 | 1440 | < th | dose dependent | rect. | 15 | 4 |
| 292 | 25.38 | radiation | 1 | 1440 | < th | dose independent | sin | 17 | NA |
| 319 | 25.39 | radiation | 1 | 720 | < th | dose independent | rect. | 4 | 20 |
| 349 | 25.41 | wind | 9 | 14400 | < th | dose dependent | rect. | 11 | 1 |
| 370 | 25.42 | temperature | 25 | 1440 | > th | dose dependent | rect. | 16 | 2 |
| 416 | 25.44 | temperature | 25 | 1440 | > th | dose independent | sin | 15 | NA |
| 429 | 25.44 | temperature | 25 | 1440 | > th | dose independent | rect. | 16 | 9 |
| 457 | 25.44 | radiation | 1 | 720 | < th | dose dependent | rect. | 20 | 23 |
| 472 | 25.45 | radiation | 1 | 720 | < th | dose independent | rect. | 3 | 23 |
| 473 | 25.45 | wind | 1 | 14400 | > th | dose dependent | rect. | 11 | 2 |
| 517 | 25.46 | radiation | 1 | 1440 | < th | dose dependent | no | NA | NA |
| 578 | 25.47 | temperature | 25 | 1440 | < th | dose independent | sin | 15 | NA |
| 582 | 25.47 | temperature | 25 | 1440 | < th | dose independent | rect. | 16 | 9 |
| 606 | 25.47 | humidity | 90 | 720 | > th | dose dependent | rect. | 7 | 17 |
| 616 | 25.47 | radiation | 1 | 1440 | < th | dose dependent | rect. | 11 | 23 |
| 618 | 25.47 | radiation | 1 | 1440 | < th | dose dependent | rect. | 15 | 23 |
| 619 | 25.47 | radiation | 1 | 1440 | < th | dose dependent | rect. | 18 | 23 |
| 623 | 25.48 | atmosphere | 1005 | 14400 | < th | dose independent | rect. | 11 | 1 |
| 637 | 25.48 | wind | 3 | 14400 | < th | dose dependent | rect. | 20 | 2 |
| 655 | 25.48 | radiation | 1 | 720 | < th | dose dependent | rect. | 14 | 21 |
| 908 | 25.59 | radiation | 1 | 720 | > th | dose independent | rect. | 13 | 23 |
| 936 | 25.61 | temperature | 25 | 1440 | > th | dose independent | rect. | 11 | 14 |
| 951 | 25.62 | temperature | 25 | 720 | < th | dose independent | rect. | 19 | 2 |
| 953 | 25.62 | temperature | 25 | 1440 | > th | dose independent | rect. | 19 | 5 |
| 998 | 25.63 | radiation | 1 | 720 | < th | dose independent | rect. | 1 | 23 |