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Os01g0706800

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Jacalin-related lectin domain containing protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 7.68 (0.0536) R2 : 0.509
β1 : 2.85 (0.232) R2dD : 0.256 R2D : -0.0268
β2 : 2.29 (0.135) R2dC : 0.308 R2C : 0.275
β3 : 2.32 (0.186) R2dE : 0.284 R2E : -0.0697
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.457 (0.126) R2dN8 : 0.0238 R2N8 : -0.0537
σ : 0.967
deviance : 430.89
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C
peak time of C : 6.16
E
wheather : temperature
threshold : 19.92
memory length : 4374
response mode : < th
dose dependency : dose independent
G
type of G : rect.
peak or start time of G : 22.1
open length of G : 1.31

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Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = < th, dose dependency = dose independent, type of G = rect.)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
430.26 0.975 7.69 2.83 2.28 2.32 -0.448 0.304 0.444 6.15 19.97 4368 22.1 1.32
430.41 0.966 7.69 2.9 2.27 2.33 -0.383 -- 0.446 6.16 19.96 4376 22.1 1.27
430.6 0.966 7.69 2.82 2.27 2.36 -- 0.334 0.445 6.17 19.95 4375 22.1 1.3
430.89 0.967 7.68 2.85 2.29 2.32 -- -- 0.457 6.16 19.92 4374 22.1 1.31
655.02 1.19 7.75 2.7 -- 2.57 -- 0.415 0.385 -- 19.6 3646 22.1 1.35
578.39 1.13 7.85 1.19 2.17 -- 0.00334 -- -0.309 6.22 -- -- -- --
578.39 1.13 7.85 1.19 2.17 -- -- -- -0.309 6.22 -- -- -- --
654.42 1.19 7.74 2.83 -- 2.65 -- -- 0.415 -- 19.8 3647 22.1 1.3
564.93 1.11 7.72 -- 2.44 2.03 -- -- 0.439 6.13 22.5 4422 22.8 1.38
823.54 1.34 7.89 1.25 -- -- -- -- -0.262 -- -- -- -- --
615.82 1.16 7.88 -- 2.19 -- -- -- -0.442 6.19 -- -- -- --
643.76 1.18 7.8 -- -- 1.57 -- -- -0.34 -- 58.2 758 23 1.57
864.85 1.37 7.92 -- -- -- -- -- -0.401 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 421.40 atmosphere 1015 43200 > th dose independent rect. 14 9
2 421.66 atmosphere 1015 43200 < th dose independent rect. 16 5
4 421.76 atmosphere 1015 43200 > th dose independent rect. 15 7
20 423.01 atmosphere 1015 43200 > th dose dependent rect. 23 1
22 423.05 atmosphere 1015 43200 > th dose independent rect. 19 2
43 424.39 atmosphere 1015 43200 > th dose independent sin 19 NA
45 424.43 atmosphere 1015 43200 > th dose dependent rect. 8 16
50 424.49 atmosphere 1015 43200 > th dose dependent rect. 21 3
97 425.47 atmosphere 1015 43200 < th dose independent sin 19 NA
131 425.89 atmosphere 1015 43200 > th dose dependent sin 21 NA
175 426.36 atmosphere 1015 43200 > th dose dependent sin 13 NA
243 426.87 atmosphere 1015 43200 > th dose dependent rect. 15 16
270 427.02 atmosphere 1015 43200 > th dose dependent rect. 19 10
275 427.06 atmosphere 1015 43200 > th dose dependent rect. 9 9
287 427.14 atmosphere 1015 43200 > th dose dependent rect. 10 5
319 427.32 atmosphere 1015 43200 > th dose dependent no NA NA
358 427.56 atmosphere 1015 43200 > th dose dependent rect. 18 23
638 428.78 atmosphere 1015 43200 < th dose independent rect. 22 23
644 428.83 atmosphere 1015 43200 < th dose independent no NA NA
667 428.97 atmosphere 1015 43200 > th dose independent no NA NA
684 429.06 atmosphere 1015 43200 > th dose independent rect. 22 23
718 429.23 atmosphere 1015 43200 < th dose independent rect. 18 23
727 429.28 atmosphere 1015 43200 < th dose independent rect. 13 4
769 429.54 atmosphere 1015 43200 > th dose independent rect. 13 2
795 429.65 atmosphere 1015 43200 > th dose dependent rect. 12 1
801 429.68 atmosphere 1015 43200 > th dose independent rect. 23 1
805 429.70 atmosphere 1015 43200 < th dose independent rect. 23 1
814 429.78 humidity 50 43200 < th dose dependent rect. 13 1