Os01g0704100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Membrane transporter.
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Os01g0704100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Membrane transporter.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 215.11 | 0.689 | 9.96 | 0.158 | 0.656 | -0.0796 | -0.000181 | -5.07 | -0.492 | 8.62 | 21 | 6892 | -- | -- |
| 233.23 | 0.711 | 9.76 | 0.42 | 0.695 | 1.28 | 0.0564 | -- | -0.394 | 9.01 | 19.76 | 13992 | -- | -- |
| 215.05 | 0.683 | 9.96 | 0.161 | 0.657 | -0.0803 | -- | -5.11 | -0.491 | 8.61 | 20.98 | 6825 | -- | -- |
| 230.91 | 0.708 | 9.75 | 0.454 | 0.521 | 1.46 | -- | -- | -0.327 | 9.16 | 16.9 | 12770 | -- | -- |
| 239.26 | 0.72 | 9.98 | 0.16 | -- | -0.121 | -- | -5.2 | -0.482 | -- | 20.91 | 6847 | -- | -- |
| 256.52 | 0.751 | 9.66 | 1.61 | 0.66 | -- | 0.0928 | -- | 0.00294 | 8.61 | -- | -- | -- | -- |
| 256.54 | 0.75 | 9.66 | 1.62 | 0.66 | -- | -- | -- | 0.00284 | 8.58 | -- | -- | -- | -- |
| 252.97 | 0.741 | 9.76 | 0.457 | -- | 1.6 | -- | -- | -0.338 | -- | 16.8 | 13050 | -- | -- |
| 232.07 | 0.71 | 9.76 | -- | 0.656 | 1.94 | -- | -- | -0.429 | 8.57 | 16.81 | 13084 | -- | -- |
| 281.02 | 0.783 | 9.68 | 1.62 | -- | -- | -- | -- | 0.00882 | -- | -- | -- | -- | -- |
| 325.45 | 0.844 | 9.7 | -- | 0.666 | -- | -- | -- | -0.177 | 8.4 | -- | -- | -- | -- |
| 256.31 | 0.746 | 9.76 | -- | -- | 1.95 | -- | -- | -0.402 | -- | 16.8 | 13064 | -- | -- |
| 350.17 | 0.873 | 9.72 | -- | -- | -- | -- | -- | -0.171 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 203.30 | wind | 5.0 | 43200 | > th | dose dependent | rect. | 23 | 3 |
| 3 | 204.64 | wind | 7.0 | 43200 | > th | dose independent | rect. | 22 | 4 |
| 5 | 204.79 | wind | 7.0 | 43200 | < th | dose independent | rect. | 22 | 5 |
| 17 | 206.05 | wind | 3.0 | 14400 | > th | dose independent | rect. | 5 | 2 |
| 24 | 206.56 | wind | 3.0 | 14400 | < th | dose independent | rect. | 5 | 2 |
| 34 | 207.31 | wind | 3.0 | 14400 | > th | dose dependent | rect. | 6 | 1 |
| 39 | 207.57 | humidity | 80.0 | 43200 | < th | dose independent | rect. | 17 | 8 |
| 40 | 207.62 | humidity | 80.0 | 43200 | < th | dose independent | rect. | 17 | 10 |
| 64 | 208.70 | humidity | 80.0 | 43200 | > th | dose independent | rect. | 17 | 10 |
| 65 | 208.71 | wind | 3.0 | 14400 | > th | dose independent | rect. | 4 | 6 |
| 70 | 208.78 | wind | 3.0 | 14400 | < th | dose independent | rect. | 5 | 4 |
| 80 | 209.06 | wind | 3.0 | 14400 | < th | dose independent | rect. | 4 | 6 |
| 81 | 209.08 | wind | 9.0 | 43200 | > th | dose independent | rect. | 22 | 1 |
| 91 | 209.24 | wind | 9.0 | 14400 | < th | dose dependent | rect. | 6 | 1 |
| 102 | 209.37 | humidity | 80.0 | 43200 | > th | dose independent | rect. | 18 | 6 |
| 116 | 209.59 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 11 | 2 |
| 117 | 209.59 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 11 | 2 |
| 169 | 210.34 | humidity | 80.0 | 43200 | > th | dose independent | rect. | 17 | 16 |
| 173 | 210.46 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 11 | 2 |
| 176 | 210.46 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 11 | 2 |
| 184 | 210.66 | humidity | 80.0 | 43200 | < th | dose independent | sin | 13 | NA |
| 235 | 211.27 | wind | 3.0 | 14400 | > th | dose independent | sin | 5 | NA |
| 236 | 211.27 | humidity | 80.0 | 43200 | < th | dose dependent | rect. | 17 | 15 |
| 278 | 211.75 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 5 | 5 |
| 282 | 211.77 | wind | 3.0 | 14400 | > th | dose independent | rect. | 16 | 17 |
| 295 | 211.87 | humidity | 80.0 | 43200 | > th | dose independent | sin | 13 | NA |
| 301 | 211.95 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 20 | 4 |
| 313 | 212.04 | wind | 7.0 | 43200 | > th | dose independent | rect. | 21 | 12 |
| 327 | 212.15 | wind | 7.0 | 43200 | < th | dose independent | rect. | 21 | 12 |
| 332 | 212.19 | wind | 3.0 | 14400 | < th | dose independent | sin | 5 | NA |
| 336 | 212.22 | wind | 9.0 | 14400 | < th | dose dependent | rect. | 5 | 5 |
| 353 | 212.35 | wind | 3.0 | 14400 | < th | dose independent | rect. | 16 | 17 |
| 364 | 212.42 | wind | 3.0 | 14400 | > th | dose independent | rect. | 19 | 15 |
| 399 | 212.66 | wind | 3.0 | 14400 | > th | dose independent | rect. | 21 | 20 |
| 405 | 212.68 | humidity | 50.0 | 43200 | < th | dose independent | rect. | 16 | 15 |
| 412 | 212.73 | wind | 3.0 | 14400 | > th | dose independent | rect. | 24 | 17 |
| 421 | 212.77 | humidity | 90.0 | 43200 | < th | dose dependent | rect. | 19 | 1 |
| 423 | 212.79 | wind | 3.0 | 14400 | < th | dose independent | rect. | 19 | 15 |
| 446 | 212.96 | humidity | 80.0 | 43200 | < th | dose dependent | sin | 12 | NA |
| 550 | 213.46 | humidity | 50.0 | 43200 | > th | dose independent | rect. | 16 | 15 |
| 597 | 213.66 | wind | 3.0 | 14400 | < th | dose independent | rect. | 24 | 17 |
| 602 | 213.69 | wind | 3.0 | 14400 | < th | dose independent | rect. | 21 | 20 |
| 684 | 214.01 | humidity | 60.0 | 43200 | > th | dose dependent | rect. | 19 | 3 |
| 685 | 214.02 | humidity | 90.0 | 43200 | < th | dose dependent | rect. | 2 | 6 |
| 743 | 214.22 | humidity | 90.0 | 43200 | < th | dose dependent | rect. | 1 | 8 |
| 757 | 214.25 | humidity | 50.0 | 43200 | > th | dose dependent | rect. | 19 | 1 |
| 775 | 214.33 | wind | 5.0 | 14400 | < th | dose dependent | rect. | 16 | 17 |
| 794 | 214.39 | humidity | 50.0 | 43200 | < th | dose independent | rect. | 16 | 5 |
| 798 | 214.40 | humidity | 90.0 | 43200 | < th | dose dependent | rect. | 6 | 1 |
| 839 | 214.49 | wind | 9.0 | 14400 | < th | dose dependent | sin | 5 | NA |
| 883 | 214.62 | wind | 1.0 | 14400 | > th | dose dependent | sin | 5 | NA |
| 908 | 214.69 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 19 | 1 |
| 938 | 214.80 | wind | 5.0 | 14400 | < th | dose dependent | rect. | 19 | 15 |
| 991 | 214.99 | humidity | 80.0 | 43200 | > th | dose independent | rect. | 1 | 9 |