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Os01g0702700

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to Transcription factor MYB86 (Myb-related protein 86) (AtMYB86) (Myb homolog 4) (AtMyb4).


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 8.83 (0.0413) R2 : 0.549
β1 : -1.28 (0.156) R2dD : 0.0755 R2D : 0.0491
β2 : 1.31 (0.1) R2dC : 0.174 R2C : 0.243
β3 : 1.89 (0.163) R2dE : 0.154 R2E : 0.217
β4 : 2.49 (0.374) R2dD*C : 0.0418 R2D*C : 0.0539
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.364 (0.0907) R2dN8 : 0.0229 R2N8 : 0.0555
σ : 0.766
deviance : 270.6
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C
peak time of C : 0.646
E
wheather : humidity
threshold : 75.25
memory length : 1323
response mode : < th
dose dependency : dose independent
G
type of G : sin
peak or start time of G : 21.7
open length of G : --

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Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = humidity, response mode = < th, dose dependency = dose independent, type of G = sin)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
269.58 0.771 8.86 -1.43 1.36 2.04 2.48 -1.26 0.327 0.579 76 1355 21.4 --
270.6 0.766 8.83 -1.28 1.31 1.89 2.49 -- 0.364 0.646 75.25 1323 21.7 --
295.16 0.8 8.86 -1.5 1.36 2.14 -- -0.887 0.33 0.383 76.36 1365 21.6 --
295.21 0.8 8.85 -1.38 1.28 1.94 -- -- 0.351 0.531 75.06 1323 21.7 --
339.5 0.858 8.78 -0.625 -- 2.22 -- 2.45 0.378 -- 83.18 952 13.1 --
348.73 0.875 8.78 -0.829 1.57 -- 2.71 -- 0.641 0.522 -- -- -- --
380.02 0.913 8.79 -0.931 1.56 -- -- -- 0.629 0.378 -- -- -- --
352.03 0.874 8.8 -0.873 -- 2.27 -- -- 0.436 -- 82.35 967 13.7 --
341.01 0.86 8.78 -- 1.38 1.62 -- -- 0.581 0.196 76.86 1355 20.7 --
533.89 1.08 8.75 -0.878 -- -- -- -- 0.654 -- -- -- -- --
402.86 0.939 8.76 -- 1.55 -- -- -- 0.732 0.347 -- -- -- --
371.67 0.898 8.8 -- -- 2.22 -- -- 0.496 -- 84 949 13.3 --
554.22 1.1 8.73 -- -- -- -- -- 0.751 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 275.38 humidity 80 1440 < th dose independent rect. 7 8
5 276.23 humidity 80 1440 > th dose independent rect. 7 9
37 279.83 humidity 80 1440 < th dose independent sin 2 NA
47 280.96 humidity 80 1440 > th dose independent sin 2 NA
53 281.22 humidity 90 720 < th dose dependent rect. 17 19
71 282.54 humidity 80 720 > th dose independent rect. 5 18
82 283.16 radiation 30 14400 < th dose independent rect. 16 11
85 283.32 humidity 70 1440 > th dose dependent rect. 7 9
89 283.46 humidity 70 1440 > th dose independent rect. 18 18
90 283.52 humidity 70 720 > th dose dependent rect. 5 19
101 283.86 radiation 30 14400 < th dose independent rect. 16 9
108 284.05 humidity 50 1440 > th dose dependent rect. 7 12
120 284.38 humidity 70 1440 < th dose independent rect. 18 18
124 284.57 humidity 90 1440 < th dose dependent rect. 5 14
126 284.60 humidity 70 720 < th dose independent rect. 19 13
127 284.60 humidity 50 1440 > th dose dependent sin 1 NA
129 284.63 humidity 90 1440 < th dose dependent rect. 7 12
135 284.67 radiation 30 14400 < th dose independent rect. 16 1
138 284.70 humidity 90 1440 < th dose dependent sin 1 NA
144 284.78 radiation 30 14400 < th dose independent rect. 16 5
170 285.02 radiation 30 14400 < th dose independent rect. 16 7
200 285.35 humidity 70 720 > th dose independent rect. 19 8
247 285.87 humidity 50 10 > th dose dependent rect. 6 22
253 285.92 humidity 90 1440 < th dose dependent rect. 7 8
299 286.36 humidity 70 720 < th dose dependent rect. 19 13
505 287.86 humidity 70 720 < th dose independent sin 10 NA
562 288.12 radiation 20 14400 < th dose independent rect. 3 3
622 288.32 humidity 80 1440 < th dose dependent no NA NA
649 288.52 humidity 70 720 > th dose independent sin 11 NA
668 288.67 humidity 70 720 < th dose independent rect. 19 1
725 288.91 humidity 50 30 > th dose dependent rect. 6 10
781 289.35 humidity 70 720 < th dose dependent rect. 19 1
846 289.66 humidity 80 1440 < th dose dependent rect. 11 23
847 289.67 wind 7 14400 > th dose independent rect. 5 11
871 289.79 wind 7 14400 > th dose independent rect. 10 6
923 290.01 wind 7 14400 < th dose independent rect. 10 6
960 290.23 wind 3 43200 > th dose dependent rect. 12 2
968 290.26 wind 3 43200 < th dose dependent rect. 9 2
989 290.41 wind 7 14400 < th dose independent rect. 5 11
995 290.44 humidity 90 720 < th dose dependent rect. 18 1